HERPUD1

General Information

Gene Name       : HERPUD1
Gene ID             : ENSG00000051108.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HERPUD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HERPUD1ENSG00000051108.1493.9393.8893.91ENCSR000AEF
HepG2HERPUD1ENSG00000051108.14100.4293.7797.09ENCSR985KAT
K562HERPUD1ENSG00000051108.1443.8738.9041.38ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HERPUD1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HERPUD1 RNA is bound by 25 proteins.  







eCLIP assay for HERPUD1 is not avaliable on ENCORE database.





25 proteins are bound to HERPUD1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr165697055856970653+3'-UTR,CDS,intron-Proximal3.8533413.73909HepG2U2AF2
chr165697313156973170+3'-UTR,CDS,intron-Distal,intron-Proximal3.961414.00320K562AQR
chr165697769456977759+3'-UTR3.001838.90174HepG2DDX55
chr165697066956970734+3'-UTR,CDS,intron-Proximal3.333507.50376HepG2PPIG
chr165697700956977070+3'-UTR,CDS,intron-Distal,intron-Proximal4.854474.62947HepG2AQR
chr165697058856970632+3'-UTR,CDS,intron-Proximal3.990946.08476K562GPKOW
chr165697702356977077+3'-UTR,CDS,intron-Distal,intron-Proximal4.217655.52578K562U2AF2
chr165697731256977356+3'-UTR3.086923.73997K562ZNF622
chr165697742156977496+3'-UTR4.5274915.41539HepG2DDX55
chr165697744956977505+3'-UTR4.6639712.14237HepG2RBFOX2
chr165697750556977584+3'-UTR5.3382716.47398HepG2RBFOX2
chr165697715556977206+3'-UTR,CDS,intron-Proximal5.9060415.61166K562RBM15
chr165697311156973192+3'-UTR,CDS,intron-Distal,intron-Proximal3.112806.57190HepG2U2AF2
chr165697056756970636+3'-UTR,CDS,intron-Proximal3.648477.19221K562BUD13
chr165697391456973981+3'-UTR,CDS,intron-Distal3.919264.20387K562ZNF622
chr165697700956977044+3'-UTR,CDS,intron-Distal,intron-Proximal3.892344.49024K562AQR
chr165697312956973173+3'-UTR,CDS,intron-Distal,intron-Proximal3.588474.89507K562SF3B4
chr165697309756973167+3'-UTR,CDS,intron-Distal,intron-Proximal4.154203.67894HepG2AQR
chr165697059156970669+3'-UTR,CDS,intron-Proximal4.511407.72847HepG2PPIG
chr165697731756977373+3'-UTR3.970745.91510K562TARDBP
chr165697770856977760+3'-UTR5.6850712.53572HepG2TIAL1
chr165697700856977092+3'-UTR,CDS,intron-Distal,intron-Proximal3.1436011.59441HepG2U2AF2
chr165697059256970621+3'-UTR,CDS,intron-Proximal6.2601412.10660K562AQR
chr165697069256970751+3'-UTR,CDS,intron-Proximal4.114916.06009K562BUD13
chr165697769156977706+3'-UTR4.143553.61881HepG2TIAL1
chr165697703556977149+3'-UTR,CDS,intron-Distal,intron-Proximal3.266357.53645HepG2SND1
chr165697720756977293+3'-UTR,CDS4.330368.37444K562RBM15
chr165697749756977592+3'-UTR3.6539813.49169HepG2DDX55
chr165697724056977277+3'-UTR,CDS3.395613.61259K562ZNF622
chr165697326756973309+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal5.145496.03362HepG2AQR
chr165697754556977602+3'-UTR3.076525.72559K562PUM2
chr165697748256977584+3'-UTR4.1060916.19714K562TARDBP
chr165697072756970776+3'-UTR,CDS,intron-Proximal3.234824.83230K562AQR
chr165697058956970661+3'-UTR,CDS,intron-Proximal3.5255712.52224HepG2BUD13
chr165697070656970768+3'-UTR,CDS,intron-Proximal4.3620212.15723HepG2PRPF8
chr165697747456977545+3'-UTR3.6184512.23242K562PUM2
chr165697312656973179+3'-UTR,CDS,intron-Distal,intron-Proximal3.128155.89596K562BUD13
chr165697380956973871+3'-UTR,CDS,intron-Distal4.144366.06009K562BUD13
chr165696938656969398+5'-UTR,CDS,intron-Distal,intron-Proximal5.0737311.65116K562AQR
chr165696930456969328+5'-UTR,CDS,intron-Distal,intron-Proximal3.757533.47293K562U2AF2
chr165696613656966166+5'-UTR,CDS3.6827723.76563HepG2DDX3X
chr165696909556969177+5'-UTR,CDS,intron-Proximal5.3610011.08778HepG2AQR
chr165696935556969388+5'-UTR,CDS,intron-Distal,intron-Proximal3.104444.59907HepG2PPIG
chr165696912856969180+5'-UTR,CDS,intron-Proximal3.040796.87556K562BUD13
chr165696608056966136+5'-UTR4.4321446.72769HepG2DDX3X
chr165696924756969385+5'-UTR,CDS,intron-Distal,intron-Proximal3.305454.76426K562PRPF8
chr165696936656969419+5'-UTR,CDS,intron-Distal,intron-Proximal4.607707.46483HepG2PRPF8
chr165696918056969224+5'-UTR,CDS3.056427.26178HepG2BUD13
chr165696908956969171+5'-UTR,CDS,intron-Proximal4.0282130.03672HepG2BUD13
chr165696938456969423+5'-UTR,CDS,intron-Distal,intron-Proximal4.561993.25089HepG2AQR
chr165696926856969405+5'-UTR,CDS,intron-Distal,intron-Proximal3.248196.59076K562EFTUD2
chr165696606856966204+5'-UTR,CDS3.1088912.23854HepG2RPS3
chr165696908656969177+5'-UTR,CDS,intron-Proximal5.111989.91892K562GPKOW
chr165696932456969355+5'-UTR,CDS,intron-Distal3.723453.64266HepG2PPIG
chr165696606956966295+5'-UTR,CDS4.0391412.72642K562DDX3X
chr165696622456966245+CDS3.793867.09919K562RBM15
chr165697614856976175+CDS,intron-Distal,intron-Proximal4.3476510.93035K562AQR
chr165696627456966348+CDS,intron-Proximal3.4834713.56690HepG2BUD13
chr165696628756966311+CDS,intron-Proximal6.2325112.86303HepG2AQR
chr165697613656976192+CDS,intron-Distal,intron-Proximal4.6021044.68346HepG2PRPF8
chr165696630256966309+CDS,intron-Proximal4.9491117.02742K562AQR
chr165696624956966274+CDS5.6852020.99214HepG2DDX3X
chr165696909656969155+CDS,intron-Proximal3.638337.14483HepG2SF3A3
chr165697413256974195+CDS,intron-Distal,intron-Proximal3.9455911.16739HepG2PRPF8
chr165697409156974154+CDS,intron-Distal,intron-Proximal4.219024.70978HepG2IGF2BP1
chr165696622056966249+CDS4.4869924.92522HepG2DDX3X
chr165696624556966268+CDS3.448367.17953K562RBM15
chr165697408056974138+CDS,intron-Distal,intron-Proximal4.077863.35109HepG2TIAL1
chr165696621256966290+CDS3.395616.73537HepG2RPS3
chr165697612956976184+CDS,intron-Distal,intron-Proximal3.358513.01637HepG2AQR
chr165697612456976136+CDS,intron-Distal3.772484.75655HepG2PRPF8
chr165696641256966500+intron-Distal3.1998110.46344HepG2HNRNPK
chr165697328256973316+intron-Distal,intron-Proximal3.591497.09156HepG2PRPF8
chr165696635356966501+intron-Distal,intron-Proximal3.973164.80214K562HNRNPK
chr165696942056969430+intron-Distal,intron-Proximal5.2108111.65116K562AQR
chr165697309956973141+intron-Distal,intron-Proximal3.835745.75388HepG2BUD13
chr165697617556976191+intron-Distal,intron-Proximal4.9383111.42662K562AQR
chr165697097956971027+intron-Distal4.009873.21228K562TIA1
chr165697309556973129+intron-Distal,intron-Proximal4.154165.26108K562SF3B4
chr165696654156966589+intron-Distal3.228097.69141K562RBM15
chr165697136456971421+intron-Distal3.910433.61897HepG2HNRNPC
chr165696939856969420+intron-Distal,intron-Proximal5.1679511.65116K562AQR
chr165697327156973322+intron-Distal,intron-Proximal3.812114.49024K562AQR
chr165697075456970822+intron-Proximal4.158356.87384K562CSTF2T
chr165696924756969303+intron-Proximal3.680396.10049K562TIA1
chr165696908956969138+intron-Proximal4.436604.82767HepG2SF3B4
chr165696630956966347+intron-Proximal4.4397618.77477K562AQR
chr165696925256969309+intron-Proximal4.345136.08255HepG2RBM22
chr165696925656969309+intron-Proximal4.737304.44893K562RBM22
chr165697056156970578+intron-Proximal6.128629.95272K562AQR
chr165696631156966350+intron-Proximal6.2566912.86303HepG2AQR
chr165696925456969299+intron-Proximal4.769628.08215HepG2EFTUD2
chr165696634856966403+intron-Proximal3.4142412.47247HepG2BUD13
chr165696925556969302+intron-Proximal3.540375.76944HepG2U2AF2
chr165697052756970596+intron-Proximal3.654165.28154K562SF3B4
chr165697057856970592+intron-Proximal6.2168911.56697K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HERPUD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HERPUD1 is not available on ENCORE database.

  • 138 RBPs can affect the levels of HERPUD1.  








The Knockdown/knockout RNA-Seq assay for HERPUD1 is not available on ENCORE database.





138 RBPs can affect the gene expression of HERPUD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HERPUD1ENSG00000051108.101243.903701514.44700-0.283903.555802.88180HepG2ACO1
HERPUD1ENSG00000051108.101838.262601521.524600.272703.285502.45780HepG2AKAP8L
HERPUD1ENSG00000051108.103250.028102015.107000.689509.039707.67290HepG2ASCC1
HERPUD1ENSG00000051108.102527.476501747.128000.532606.950504.85270HepG2ATP5C1
HERPUD1ENSG00000051108.102775.945102340.327600.246203.272102.53560HepG2AUH
HERPUD1ENSG00000051108.101450.209001017.456000.511204.178703.09460HepG2BCLAF1
HERPUD1ENSG00000051108.10851.254201186.10550-0.478604.447303.70940HepG2BOP1
HERPUD1ENSG00000051108.101797.834301450.511700.309602.706701.48950HepG2BUD13
HERPUD1ENSG00000051108.102064.416601419.851600.539908.100906.87970HepG2CALR
HERPUD1ENSG00000051108.103193.937401914.478800.7383010.772709.33930HepG2CIRBP
HERPUD1ENSG00000051108.102280.456501514.072500.5908017.2468015.89260HepG2CKAP4
HERPUD1ENSG00000051108.101481.596201088.891900.444204.075403.25560HepG2CPSF6
HERPUD1ENSG00000051108.102686.655401594.372300.752709.407907.50010HepG2CPSF7
HERPUD1ENSG00000051108.101755.385201264.584000.473006.118204.60130HepG2YBX3
HERPUD1ENSG00000051108.102830.365302014.846800.4902014.5469013.07630HepG2DAZAP1
HERPUD1ENSG00000051108.101676.445201400.625700.259203.114502.23360HepG2DDX19B
HERPUD1ENSG00000051108.101859.833601266.314500.554403.801002.45500HepG2DDX1
HERPUD1ENSG00000051108.101586.821501243.522000.351602.949502.25140HepG2DDX21
HERPUD1ENSG00000051108.101826.559901216.813700.585908.465306.88340HepG2DDX24
HERPUD1ENSG00000051108.101150.05240872.148600.399002.851001.43940HepG2DDX28
HERPUD1ENSG00000051108.103830.628803107.747200.301602.668701.39190HepG2DDX47
HERPUD1ENSG00000051108.104319.883602003.902101.1081018.6349017.22450HepG2DDX6
HERPUD1ENSG00000051108.101860.164701197.614600.635208.845407.19590HepG2DHX30
HERPUD1ENSG00000051108.102003.597701448.903700.467508.557407.49690HepG2DKC1
HERPUD1ENSG00000051108.101507.614401241.678700.279902.861802.14970HepG2DNAJC21
HERPUD1ENSG00000051108.101799.515301230.784000.5479013.6496012.31330HepG2DNAJC2
HERPUD1ENSG00000051108.101892.129401145.044000.724506.842205.12700HepG2AGO1
HERPUD1ENSG00000051108.102788.600901926.578600.533405.503504.68370HepG2EIF2S1
HERPUD1ENSG00000051108.103084.545402129.182400.534704.884704.03920HepG2EIF4A3
HERPUD1ENSG00000051108.103783.216002072.892700.867909.398108.16890HepG2EIF4B
HERPUD1ENSG00000051108.102960.597201904.291300.636509.111107.67050HepG2EIF4G2
HERPUD1ENSG00000051108.105114.601202686.985200.9285042.0185040.19570HepG2ETF1
HERPUD1ENSG00000051108.101333.23530958.269300.476303.634102.18910HepG2FKBP4
HERPUD1ENSG00000051108.101166.703402147.99390-0.8806012.7632011.38410HepG2FXR1
HERPUD1ENSG00000051108.10633.243201020.04330-0.687806.784705.38590HepG2GEMIN5
HERPUD1ENSG00000051108.103167.853101234.295701.3597028.0176026.22740HepG2GPKOW
HERPUD1ENSG00000051108.101928.958401445.835800.415807.162305.68190HepG2HDGF
HERPUD1ENSG00000051108.101769.385801253.575100.497105.585904.71170HepG2HNRNPA1
HERPUD1ENSG00000051108.102562.379001805.912100.504704.919603.99770HepG2HNRNPF
HERPUD1ENSG00000051108.102816.859702017.485000.481405.389004.43820HepG2HNRNPK
HERPUD1ENSG00000051108.102751.964901835.310200.5843019.7454018.09710HepG2HNRNPL
HERPUD1ENSG00000051108.101709.050701177.915500.536905.323104.48020HepG2HNRNPLL
HERPUD1ENSG00000051108.10935.341801348.80480-0.528106.076704.73840HepG2HNRNPM
HERPUD1ENSG00000051108.102841.739501778.319600.6762010.795609.45770HepG2IGF2BP1
HERPUD1ENSG00000051108.101606.348801414.904500.183001.955401.32600HepG2ILF2
HERPUD1ENSG00000051108.101851.357201384.366200.419308.575106.86050HepG2KIF1C
HERPUD1ENSG00000051108.103162.254602148.742700.557406.019905.06230HepG2MAGOH
HERPUD1ENSG00000051108.101736.063601328.558200.385903.841502.40840HepG2NAA15
HERPUD1ENSG00000051108.104013.226502723.249600.559304.290302.50970HepG2NKRF
HERPUD1ENSG00000051108.101382.733801044.482300.404603.266102.45400HepG2NSUN2
HERPUD1ENSG00000051108.103778.908501969.862600.9398015.5978013.93580HepG2PABPC4
HERPUD1ENSG00000051108.101676.029201371.055300.289703.462602.52560HepG2PARN
HERPUD1ENSG00000051108.103313.913302127.503900.6393018.7604017.40910HepG2PCBP1
HERPUD1ENSG00000051108.102078.457101426.973900.542503.494702.33090HepG2PCBP2
HERPUD1ENSG00000051108.101909.227801235.459700.6278012.5442011.03910HepG2PPIL4
HERPUD1ENSG00000051108.101768.643702164.76380-0.291604.326403.67550HepG2PTBP1
HERPUD1ENSG00000051108.104737.326602023.179501.2273047.8725045.39500HepG2PUM2
HERPUD1ENSG00000051108.101322.378101542.55590-0.222202.424001.83710HepG2PUS1
HERPUD1ENSG00000051108.102107.593101377.033300.613903.568302.77030HepG2RAVER1
HERPUD1ENSG00000051108.102418.676401976.802200.290902.959802.07510HepG2RBM15
HERPUD1ENSG00000051108.102891.836402127.835300.442505.623504.69430HepG2RBM25
HERPUD1ENSG00000051108.101657.795701297.059600.353902.502601.49490HepG2RCC2
HERPUD1ENSG00000051108.101961.176302409.21660-0.296804.304603.65650HepG2NELFE
HERPUD1ENSG00000051108.101618.136502243.78100-0.471609.425008.38890HepG2RECQL
HERPUD1ENSG00000051108.101964.751001352.720500.538403.340402.30130HepG2RPS10
HERPUD1ENSG00000051108.10647.957001114.76630-0.7828011.2299010.09280HepG2RPS19
HERPUD1ENSG00000051108.101338.83020878.529800.607705.263104.21100HepG2RRP9
HERPUD1ENSG00000051108.101552.031201233.544300.331204.807503.99800HepG2SAFB2
HERPUD1ENSG00000051108.101571.515301118.828800.490104.855103.62350HepG2SERBP1
HERPUD1ENSG00000051108.103272.146602033.396800.686206.245905.20720HepG2SF3A3
HERPUD1ENSG00000051108.102838.627701165.875901.2837032.4616030.36250HepG2SF3B1
HERPUD1ENSG00000051108.102270.785101828.892600.312105.868604.90930HepG2SLBP
HERPUD1ENSG00000051108.102413.011301343.591500.844604.111102.17780HepG2SLTM
HERPUD1ENSG00000051108.101039.021501438.49810-0.469309.359508.28910HepG2SMN1
HERPUD1ENSG00000051108.103871.074902536.588300.6097021.5930020.53900HepG2SRFBP1
HERPUD1ENSG00000051108.102794.064101774.208700.6551018.7916017.27050HepG2SRSF7
HERPUD1ENSG00000051108.102456.306901913.881000.359906.386405.60940HepG2SRSF9
HERPUD1ENSG00000051108.103535.772902202.374700.6829023.6405022.46760HepG2SSB
HERPUD1ENSG00000051108.102093.932401305.781700.681205.247903.59990HepG2STAU1
HERPUD1ENSG00000051108.102353.177901286.878600.870607.965805.99440HepG2SUB1
HERPUD1ENSG00000051108.101136.104502141.66530-0.9146033.3420031.59450HepG2SUCLG1
HERPUD1ENSG00000051108.104013.365002898.839200.469203.439101.94840HepG2SUGP2
HERPUD1ENSG00000051108.102270.664501320.074000.7824014.4679012.44130HepG2SUPT6H
HERPUD1ENSG00000051108.103473.645902114.447400.7161018.9608017.68060HepG2TAF15
HERPUD1ENSG00000051108.101997.585501148.230500.7987012.3171010.95320HepG2TARDBP
HERPUD1ENSG00000051108.101062.36720768.177900.467703.647402.52140HepG2TFIP11
HERPUD1ENSG00000051108.102586.078801942.998900.412404.863103.76580HepG2TIA1
HERPUD1ENSG00000051108.10974.868101345.86760-0.465305.534004.87530HepG2TIAL1
HERPUD1ENSG00000051108.10866.060101357.99200-0.6489013.6294012.51450HepG2TRIM56
HERPUD1ENSG00000051108.102276.259401863.412400.288602.857901.96970HepG2TUFM
HERPUD1ENSG00000051108.102595.545501672.278300.634108.395907.30080HepG2U2AF1
HERPUD1ENSG00000051108.102728.398901972.462700.468004.304903.24820HepG2UBE2L3
HERPUD1ENSG00000051108.102511.863001803.314900.4780011.089409.86150HepG2UPF1
HERPUD1ENSG00000051108.101511.215701128.192600.421603.251602.46950HepG2XRN2
HERPUD1ENSG00000051108.102346.731501722.761000.4458010.164309.01270HepG2ZC3H8
HERPUD1ENSG00000051108.102613.430101983.297200.397909.709208.84140HepG2ZNF622
HERPUD1ENSG00000051108.10740.38470963.99400-0.380702.717801.50870K562ABCF1
HERPUD1ENSG00000051108.10306.68410627.08180-1.031905.125302.78650K562ADAR
HERPUD1ENSG00000051108.106767.091504942.732900.453104.774803.39660K562AKAP8
HERPUD1ENSG00000051108.10463.63980745.08300-0.684402.476101.65340K562BOP1
HERPUD1ENSG00000051108.10427.97530614.02070-0.520804.010602.69300K562CCAR1
HERPUD1ENSG00000051108.10802.002801440.26930-0.844704.320802.94730K562CNOT7
HERPUD1ENSG00000051108.10708.210701337.30180-0.917104.401902.98530K562CPEB4
HERPUD1ENSG00000051108.10584.97180792.26460-0.437602.121301.42580K562CPSF6
HERPUD1ENSG00000051108.10356.76370670.69330-0.910704.449402.09440K562YBX3
HERPUD1ENSG00000051108.10368.13160646.95900-0.813505.290002.78180K562DDX1
HERPUD1ENSG00000051108.101188.248101453.96640-0.291202.349101.39250K562DDX3X
HERPUD1ENSG00000051108.10632.326801383.16590-1.129206.297705.37160K562DDX47
HERPUD1ENSG00000051108.102256.002901474.129400.6138012.691109.75900K562DDX6
HERPUD1ENSG00000051108.10464.65370687.35460-0.564904.455502.70450K562DHX30
HERPUD1ENSG00000051108.10359.49370660.29660-0.877109.697507.37300K562DNAJC21
HERPUD1ENSG00000051108.10421.94940599.81550-0.507402.868501.56330K562EEF2
HERPUD1ENSG00000051108.101222.93810685.375500.8353016.8747015.31850K562EIF2S2
HERPUD1ENSG00000051108.10364.23550624.58180-0.778004.032402.79300K562EIF3A
HERPUD1ENSG00000051108.10391.69820976.34380-1.3176031.0093028.37110K562EIF3G
HERPUD1ENSG00000051108.101833.141101519.035600.271102.019301.31540K562EIF4A3
HERPUD1ENSG00000051108.101811.359701367.973700.404905.454403.74930K562EIF4B
HERPUD1ENSG00000051108.101452.126001044.524900.475204.733802.58100K562FASTKD2
HERPUD1ENSG00000051108.10377.44500683.18280-0.856004.707803.48460K562FTO
HERPUD1ENSG00000051108.10506.076601579.73310-1.6423062.4642059.86450K562FXR1
HERPUD1ENSG00000051108.101924.500001459.180300.399202.409901.75630K562G3BP2
HERPUD1ENSG00000051108.10413.43360580.99570-0.490903.118001.59390K562GEMIN5
HERPUD1ENSG00000051108.10854.384801347.90550-0.657804.274002.30400K562HNRNPAB
HERPUD1ENSG00000051108.101122.97590919.316200.288602.042301.51880K562HNRNPC
HERPUD1ENSG00000051108.10481.00670821.03770-0.771409.150507.01060K562HNRNPF
HERPUD1ENSG00000051108.102189.90650939.497401.2208026.8892024.67880K562HSPD1
HERPUD1ENSG00000051108.102239.997101744.168400.360902.357301.43150K562IGF2BP2
HERPUD1ENSG00000051108.102322.056301773.921000.388403.826402.38050K562IGF2BP3
HERPUD1ENSG00000051108.101545.40910890.499100.795209.155406.54390K562LARP7
HERPUD1ENSG00000051108.101484.38940819.940600.856206.608704.16460K562LSM11
HERPUD1ENSG00000051108.101396.283401832.71970-0.392404.243203.19740K562MAGOH
HERPUD1ENSG00000051108.105940.648704754.381000.321302.646101.60210K562MAK16
HERPUD1ENSG00000051108.101527.913401828.95100-0.259502.166701.36000K562MATR3
HERPUD1ENSG00000051108.10538.53260738.36040-0.455303.577402.57470K562METAP2
HERPUD1ENSG00000051108.101449.39230905.288700.678907.457104.83440K562NUSAP1
HERPUD1ENSG00000051108.10726.615801383.67860-0.929207.429105.42290K562PABPC1
HERPUD1ENSG00000051108.102732.527901791.635200.608905.085303.19640K562PCBP1
HERPUD1ENSG00000051108.101139.230001630.60590-0.517305.854404.41610K562PCBP2
HERPUD1ENSG00000051108.10530.34030951.19260-0.842808.896907.40990K562PCBP3
HERPUD1ENSG00000051108.102012.765401257.514500.678508.121905.39140K562PKM
HERPUD1ENSG00000051108.10347.52550729.61300-1.0700016.6976014.81450K562POLR2G
HERPUD1ENSG00000051108.101173.11260786.643100.576505.947904.67010K562PPIG
HERPUD1ENSG00000051108.101551.87500824.287600.912708.454706.68970K562PSIP1
HERPUD1ENSG00000051108.10700.682701780.62680-1.3456038.4258036.06020K562PTBP1
HERPUD1ENSG00000051108.103148.460904640.54850-0.559603.541802.93900K562PUS1
HERPUD1ENSG00000051108.102976.429804522.22880-0.603502.208401.66840K562RBM15
HERPUD1ENSG00000051108.101272.71330866.166200.555106.287903.91900K562RBM17
HERPUD1ENSG00000051108.10958.11290752.172400.349002.612401.65220K562RCC2
HERPUD1ENSG00000051108.10845.807601796.62550-1.0869019.8551017.10160K562NELFE
HERPUD1ENSG00000051108.10349.60350574.37300-0.716305.195404.07360K562RPS19
HERPUD1ENSG00000051108.10699.497201284.74660-0.877106.746704.22820K562RPS3A
HERPUD1ENSG00000051108.103751.171302347.902200.675902.416201.32380K562SF1
HERPUD1ENSG00000051108.10514.62130719.32070-0.483102.914501.91440K562SF3B1
HERPUD1ENSG00000051108.101977.665001517.204900.382304.563003.45470K562SF3B4
HERPUD1ENSG00000051108.10439.38210676.35660-0.622304.179802.60490K562SLBP
HERPUD1ENSG00000051108.102282.156801347.784500.759704.919402.54380K562SMN1
HERPUD1ENSG00000051108.101211.71270896.555100.434503.802301.86130K562SND1
HERPUD1ENSG00000051108.105432.193802696.756901.010205.880903.87420K562SNRNP200
HERPUD1ENSG00000051108.101211.967701745.64530-0.526406.861205.75730K562SRSF1
HERPUD1ENSG00000051108.102038.994401648.722900.306402.380401.41730K562SRSF5
HERPUD1ENSG00000051108.101701.652701007.087300.756603.841702.29550K562SSB
HERPUD1ENSG00000051108.101328.177801766.62640-0.411503.661902.84340K562TARDBP
HERPUD1ENSG00000051108.102157.226201520.902600.504105.790503.46670K562TBRG4
HERPUD1ENSG00000051108.10524.23850792.81260-0.596804.794003.53360K562TIAL1
HERPUD1ENSG00000051108.101739.951801460.719700.252302.188901.47390K562U2AF2
HERPUD1ENSG00000051108.10699.157101249.53040-0.837702.975802.09810K562WDR43
HERPUD1ENSG00000051108.10428.77180588.45510-0.456702.915501.66770K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HERPUD1 is not available on ENCORE database.





10 RBPs can affect the splicing of HERPUD1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHERPUD1ENSG00000051108.10chr16+569693125696938756969146569692245697059856970729-0.062000.000160.00454excludedK562SF3B4
SEHERPUD1ENSG00000051108.10chr16+569693125696938756969146569692245697059856970729-0.157000.002670.07672excludedK562PRPF8
SEHERPUD1ENSG00000051108.10chr16+569693125696938756969146569692245697059856970729-0.089000.000040.00084excludedK562AQR
SEHERPUD1ENSG00000051108.10chr16+569693125696938756969146569692245697059856970729-0.096000.000060.00301excludedHepG2SF3A3
SEHERPUD1ENSG00000051108.10chr16+569693125696938756969146569692245697059856970729-0.131000.000000.00000excludedHepG2SF3B4
A3SSHERPUD1ENSG00000051108.10chr16+5697377956973858569738065697385856973148569732710.188000.000000.00000longerK562AQR
MXEHERPUD1ENSG00000051108.10chr16+56973806569741575697604356976149569731485697327156977037569777930.071000.003150.073061includedK562RBM15
MXEHERPUD1ENSG00000051108.10chr16+56973806569741575697604356976149569731485697327156977037569777930.094000.000000.000001includedK562DROSHA
MXEHERPUD1ENSG00000051108.10chr16+56973806569741575697604356976149569731485697327156977037569777930.193000.000000.000001includedK562PUS1
MXEHERPUD1ENSG00000051108.10chr16+5697380656974157569760435697614956973148569732715697703756977793-0.076000.015990.092152includedK562AQR
MXEHERPUD1ENSG00000051108.10chr16+56973806569741575697604356976149569731485697327156977037569777930.088000.001680.074061includedK562UTP18
MXEHERPUD1ENSG00000051108.10chr16+56973806569741575697604356976149569731485697327156977037569777930.069000.002870.085941includedK562AKAP8L
MXEHERPUD1ENSG00000051108.10chr16+56973806569741575697604356976149569731485697327156977037569777930.131000.000000.000001includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HERPUD1 is not avaliable on ENCORE database.