G2E3

General Information

Gene Name : G2E3
Gene ID : ENSG00000092140.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: G2E3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	G2E3	ENSG00000092140.15	12.20	10.96	11.58	ENCSR000AEF
HepG2	G2E3	ENSG00000092140.15	21.22	38.62	29.92	ENCSR985KAT
K562	G2E3	ENSG00000092140.15	13.11	13.74	13.43	ENCSR000AEO

Assays

2 Released experiments are available on ENCORE database.

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	G2E3-BGRSDLV02-RSD293RBP		G2E3	Ribo-STAMP-293T	Released			shRNA	KD% =
knockdown followed by RNA-seq	G2E3-BGRSDLV02-RSD293RBP		G2E3	Ribo-STAMP-293T	Released			shRNA	KD% = ,

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

GeneName	Cell_Line	Method	Sample_reps	Control_reps	KD%	Status	Project
G2E3	Ribo-STAMP-293T	shRNA	BGRSLV03-27,BGRSLV03-28	BGRSLV03-1,BGRSLV03-2		NotSatisfied	ENCORE2
G2E3	Ribo-STAMP-293T	shRNA	BGRSLV09-11,BGRSLV09-12	BGRSLV09-1,BGRSLV09-2		NotSatisfied	ENCORE2
G2E3	Ribo-STAMP-293T	shRNA	BGRSLV09-13,BGRSLV09-14	BGRSLV09-1,BGRSLV09-2		NotSatisfied	ENCORE2
G2E3	Ribo-STAMP-293T	shRNA	BGRSDLV02-25,BGRSDLV02-26	BGRSDLV02-1,BGRSDLV02-2		Released	ENCORE2
G2E3	Ribo-STAMP-293T	shRNA	G2E3-BGRSDLV02-27dox,G2E3-BGRSDLV02-28dox	G2E3-BGRSDLV02-25,G2E3-BGRSDLV02-26	,	Released	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for G2E3 is not avaliable on ENCORE database.

Proteins bound to RNA

G2E3 RNA is bound by 33 proteins.

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eCLIP assay for G2E3 is not avaliable on ENCORE database.

33 proteins are bound to G2E3 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	31086935	31087074	+	3'-UTR	6.96923	75.21642	K562	QKI
chr14	31086947	31086994	+	3'-UTR	6.72458	61.77190	HepG2	QKI
chr14	31086994	31087011	+	3'-UTR	6.45905	52.79780	HepG2	QKI
chr14	31087011	31087029	+	3'-UTR	7.70645	36.33488	HepG2	QKI
chr14	31083092	31083171	+	intron-Distal	6.94002	25.12427	HepG2	QKI
chr14	31087038	31087090	+	3'-UTR	5.64629	22.62592	HepG2	QKI
chr14	31064737	31064786	+	intron-Distal	5.30585	21.57907	HepG2	QKI
chr14	31065818	31065870	+	intron-Distal	6.67970	20.80237	HepG2	QKI
chr14	31062720	31062849	+	3'-UTR,CDS,intron-Proximal	3.55145	19.57012	HepG2	BCLAF1
chr14	31082408	31082441	+	intron-Distal	4.88666	19.49221	HepG2	QKI
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 177 entries

eCLIP assay for G2E3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for G2E3 is not available on ENCORE database.
151 RBPs can affect the levels of G2E3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for G2E3 is not available on ENCORE database.

151 RBPs can affect the gene expression of G2E3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
G2E3	ENSG00000092140.10	454.84210	1993.67470	-2.13200	78.81540	76.83730	HepG2	TIAL1
G2E3	ENSG00000092140.10	556.09380	1610.32380	-1.53400	76.48360	74.64200	HepG2	ZNF622
G2E3	ENSG00000092140.10	849.32200	2765.61490	-1.70320	61.40730	59.06330	HepG2	PUF60
G2E3	ENSG00000092140.10	796.26860	2051.54160	-1.36540	54.64540	52.22940	HepG2	HNRNPU
G2E3	ENSG00000092140.10	872.13140	2011.26200	-1.20550	47.32010	45.36250	HepG2	TRIM56
G2E3	ENSG00000092140.10	626.92790	1464.18660	-1.22370	42.58990	40.54100	HepG2	UPF1
G2E3	ENSG00000092140.10	1361.02240	2730.49360	-1.00450	40.51710	38.51510	HepG2	SRSF5
G2E3	ENSG00000092140.10	919.25260	1822.68010	-0.98750	37.93940	35.79230	HepG2	DNAJC2
G2E3	ENSG00000092140.10	493.02470	1687.34170	-1.77500	36.62790	34.71430	HepG2	SUPV3L1
G2E3	ENSG00000092140.10	1625.04610	2935.69860	-0.85320	36.25340	34.60360	HepG2	PUM1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 177 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for G2E3 is not available on ENCORE database.

11 RBPs can affect the splicing of G2E3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	G2E3	ENSG00000092140.10	chr14	+	31059737	31059870	31058575	31058690	31061528	31061653	0.69300	0.00000	included	HepG2	U2AF1
SE	G2E3	ENSG00000092140.10	chr14	+	31059737	31059870	31058588	31058690	31061528	31061653	0.44900	0.00000	included	HepG2	HNRNPK
SE	G2E3	ENSG00000092140.10	chr14	+	31074710	31075018	31071204	31071337	31077093	31077208	-0.28700	0.00002	excluded	HepG2	HNRNPK
SE	G2E3	ENSG00000092140.10	chr14	+	31059737	31059870	31058575	31058690	31061528	31061653	0.62100	0.00000	included	HepG2	U2AF2
SE	G2E3	ENSG00000092140.10	chr14	+	31074710	31075018	31071204	31071337	31077093	31077208	-0.37200	0.00000	excluded	HepG2	U2AF2
SE	G2E3	ENSG00000092140.10	chr14	+	31074710	31075018	31071204	31071337	31077093	31077275	-0.16100	0.00000	excluded	K562	AQR
SE	G2E3	ENSG00000092140.10	chr14	+	31059737	31059870	31058575	31058690	31061528	31061653	0.29000	0.00092	included	K562	LARP4
SE	G2E3	ENSG00000092140.10	chr14	+	31059737	31059870	31058588	31058690	31061528	31061653	0.68800	0.00000	included	K562	U2AF1
SE	G2E3	ENSG00000092140.10	chr14	+	31074710	31075018	31071204	31071337	31077093	31077208	-0.21100	0.00008	excluded	HepG2	SF3A3
SE	G2E3	ENSG00000092140.10	chr14	+	31059737	31059870	31058588	31058690	31061528	31061653	0.28300	0.00047	included	K562	SRSF7

Showing 1 to 10 of 32 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

G2E3

General Information

Functions

Localization

Domains (AlphaFold: G2E3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for G2E3 is not avaliable on ENCORE database.

33 proteins are bound to G2E3 RNA:

eCLIP assay for G2E3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for G2E3 is not available on ENCORE database.

151 RBPs can affect the gene expression of G2E3 :

The Knockdown/knockout RNA-Seq assay for G2E3 is not available on ENCORE database.

11 RBPs can affect the splicing of G2E3 :

The Knockdown/knockout RNA-Seq assay for G2E3 is not avaliable on ENCORE database.