CROCCP2

General Information

Gene Name : CROCCP2
Gene ID : ENSG00000215908.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CROCCP2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CROCCP2	ENSG00000215908.10	4.05	4.58	4.31	ENCSR000AEF
HepG2	CROCCP2	ENSG00000215908.10	30.98	17.40	24.19	ENCSR985KAT
K562	CROCCP2	ENSG00000215908.10	19.82	14.22	17.02	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CROCCP2 is not avaliable on ENCORE database.

Proteins bound to RNA

CROCCP2 RNA is bound by 42 proteins.

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eCLIP assay for CROCCP2 is not avaliable on ENCORE database.

42 proteins are bound to CROCCP2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	16957979	16958025	-	intron-Distal,intron-Proximal	5.86880	70.64842	K562	AQR
chr1	16953640	16953738	-	intron-Distal	3.97145	48.72379	HepG2	PPIG
chr1	16952356	16952442	-	intron-Distal	3.82774	47.72296	HepG2	PPIG
chr1	16955130	16955183	-	intron-Distal,intron-Proximal	4.43302	46.37050	K562	AQR
chr1	16958015	16958069	-	intron-Distal,intron-Proximal	4.22322	42.14628	HepG2	PPIG
chr1	16957246	16957319	-	intron-Distal,intron-Proximal	5.43983	41.38129	K562	AQR
chr1	16952307	16952417	-	intron-Distal	4.46105	37.60824	K562	DDX24
chr1	16958781	16958850	-	intron-Distal	3.85321	37.52485	HepG2	PPIG
chr1	16957539	16957627	-	intron-Distal,intron-Proximal	3.45255	37.35095	K562	BUD13
chr1	16958768	16958842	-	intron-Distal,intron-Proximal	4.30876	36.27087	K562	DDX24
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 267 entries

eCLIP assay for CROCCP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CROCCP2 is not available on ENCORE database.
97 RBPs can affect the levels of CROCCP2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CROCCP2 is not available on ENCORE database.

97 RBPs can affect the gene expression of CROCCP2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CROCCP2	ENSG00000215908.5	830.91200	392.44580	1.08210	18.75150	17.66320	HepG2	TIAL1
CROCCP2	ENSG00000215908.5	1814.23170	843.49740	1.10480	17.79260	16.20580	HepG2	MAGOH
CROCCP2	ENSG00000215908.5	1935.80020	1199.22630	0.69070	15.68890	14.67200	HepG2	SSB
CROCCP2	ENSG00000215908.5	1531.92420	825.10770	0.89260	15.93350	14.58050	K562	HNRNPC
CROCCP2	ENSG00000215908.5	971.02780	505.51930	0.94160	15.14340	13.59450	HepG2	IGF2BP1
CROCCP2	ENSG00000215908.5	2977.52370	1926.53680	0.62800	14.13020	12.78410	K562	RBM15
CROCCP2	ENSG00000215908.5	869.33020	513.37380	0.75980	11.81290	10.47150	HepG2	HNRNPF
CROCCP2	ENSG00000215908.5	1486.89720	894.61750	0.73290	10.52500	9.46290	HepG2	PUF60
CROCCP2	ENSG00000215908.5	778.64490	1223.01240	-0.65140	10.12430	9.27230	HepG2	RBM22
CROCCP2	ENSG00000215908.5	822.75820	504.39840	0.70580	10.18900	8.99850	HepG2	SRSF7
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 112 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CROCCP2 is not available on ENCORE database.

17 RBPs can affect the splicing of CROCCP2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CROCCP2	ENSG00000215908.5	chr1	-	16952847	16952994			16952269	16952500	16953639	16953784	-0.15100	0.00000	0.00004	excluded	K562	AQR
SE	CROCCP2	ENSG00000215908.5	chr1	-	16958500	16958580			16958024	16958108	16958769	16958866	0.32800	0.00000	0.00000	included	K562	HNRNPK
A3SS	CROCCP2	ENSG00000215908.5	chr1	-	16969522	16969753			16969522	16969640	16971140	16971178	0.31600	0.00000	0.00005	longer	K562	AQR
SE	CROCCP2	ENSG00000215908.5	chr1	-	16946339	16946533			16944750	16945598	16952269	16952500	0.20800	0.00001	0.00030	included	K562	PUS1
SE	CROCCP2	ENSG00000215908.5	chr1	-	16946339	16946533			16944750	16945598	16952269	16952500	0.19900	0.00002	0.00131	included	K562	AKAP8L
SE	CROCCP2	ENSG00000215908.5	chr1	-	16952847	16952994			16952269	16952500	16953639	16953784	-0.11400	0.00002	0.00961	excluded	K562	APOBEC3C
SE	CROCCP2	ENSG00000215908.5	chr1	-	16946339	16946533			16944750	16945598	16952269	16952500	0.20600	0.00002	0.00094	included	K562	AGGF1
MXE	CROCCP2	ENSG00000215908.5	chr1	-	16961521	16961695	16969522	16969640	16959589	16959841	16971140	16971178	0.33100	0.00005	0.00066	1included	K562	AQR
SE	CROCCP2	ENSG00000215908.5	chr1	-	16952847	16952994			16952269	16952500	16953639	16953784	-0.28600	0.00006	0.00503	excluded	HepG2	PCBP1
MXE	CROCCP2	ENSG00000215908.5	chr1	-	16961521	16961695	16969522	16969633	16959589	16959841	16971140	16971178	0.62300	0.00011	0.00127	1included	K562	AQR

Showing 1 to 10 of 26 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CROCCP2

General Information

Functions

Localization

Domains (AlphaFold: CROCCP2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CROCCP2 is not avaliable on ENCORE database.

42 proteins are bound to CROCCP2 RNA:

eCLIP assay for CROCCP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CROCCP2 is not available on ENCORE database.

97 RBPs can affect the gene expression of CROCCP2 :

The Knockdown/knockout RNA-Seq assay for CROCCP2 is not available on ENCORE database.

17 RBPs can affect the splicing of CROCCP2 :

The Knockdown/knockout RNA-Seq assay for CROCCP2 is not avaliable on ENCORE database.