AMBP

General Information

Gene Name : AMBP
Gene ID : ENSG00000106927.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AMBP)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	AMBP	ENSG00000106927.11	0.00	0.00	0.00	ENCSR000AEF
HepG2	AMBP	ENSG00000106927.11	1482.77	1210.71	1346.74	ENCSR985KAT
K562	AMBP	ENSG00000106927.11	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AMBP is not avaliable on ENCORE database.

Proteins bound to RNA

AMBP RNA is bound by 36 proteins.

CanvasJS.com

eCLIP assay for AMBP is not avaliable on ENCORE database.

36 proteins are bound to AMBP RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	116823835	116823870	-	3'-UTR,CDS,intron-Distal	4.85592	400.00000	HepG2	RPS3
chr9	116822486	116822508	-	3'-UTR,intron-Distal	5.96957	400.00000	HepG2	RPS3
chr9	116825011	116825027	-	3'-UTR,CDS,intron-Distal	4.40002	400.00000	HepG2	RPS3
chr9	116822449	116822466	-	3'-UTR,intron-Distal	6.23619	400.00000	HepG2	LARP4
chr9	116831987	116832003	-	3'-UTR,CDS,intron-Distal	5.14967	400.00000	HepG2	RPS3
chr9	116825007	116825020	-	3'-UTR,CDS,intron-Distal	5.61321	400.00000	HepG2	SND1
chr9	116823833	116823869	-	3'-UTR,CDS,intron-Distal	5.77310	400.00000	HepG2	SND1
chr9	116832022	116832025	-	3'-UTR,CDS,intron-Distal	4.80538	400.00000	HepG2	SND1
chr9	116831978	116831987	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.45628	400.00000	HepG2	SND1
chr9	116831978	116831987	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.36143	400.00000	HepG2	RPS3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 206 entries

eCLIP assay for AMBP is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for AMBP is not available on ENCORE database.
135 RBPs can affect the levels of AMBP.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for AMBP is not available on ENCORE database.

135 RBPs can affect the gene expression of AMBP :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AMBP	ENSG00000106927.7	20956.12950	78983.62440	-1.91420	300.52290	298.00000	HepG2	SRSF1
AMBP	ENSG00000106927.7	28227.03500	80886.78400	-1.51880	162.23060	159.77720	HepG2	NELFE
AMBP	ENSG00000106927.7	38077.71620	8130.63720	2.22740	122.71550	120.18830	HepG2	BOP1
AMBP	ENSG00000106927.7	31221.30830	75333.22140	-1.27080	119.69720	116.97700	HepG2	RECQL
AMBP	ENSG00000106927.7	33843.74870	14327.49620	1.24000	96.39220	93.78240	HepG2	SRSF7
AMBP	ENSG00000106927.7	53745.96880	29481.33870	0.86630	79.36460	76.82430	HepG2	SLBP
AMBP	ENSG00000106927.7	30016.96350	8073.48410	1.89440	76.21320	73.68250	HepG2	HNRNPLL
AMBP	ENSG00000106927.7	33707.02700	14583.01450	1.20870	71.58220	69.01620	HepG2	HNRNPF
AMBP	ENSG00000106927.7	31935.73020	15866.82120	1.00910	70.06880	67.79660	HepG2	TRIM56
AMBP	ENSG00000106927.7	35941.38310	14360.05810	1.32350	62.02480	59.41900	HepG2	IGF2BP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 140 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for AMBP is not available on ENCORE database.

5 RBPs can affect the splicing of AMBP :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	AMBP	ENSG00000106927.7	chr9	-	116823204	116823403			116822406	116822550	116823703	116823871	-0.05700	0.00000	0.00000	excluded	HepG2	NCBP2
A5SS	AMBP	ENSG00000106927.7	chr9	-	116823703	116823871			116823754	116823871	116822406	116822550	-0.47400	0.00000	0.00002	shorter	HepG2	SUPV3L1
MXE	AMBP	ENSG00000106927.7	chr9	-	116837239	116837316	116838945	116839020	116836315	116836432	116840372	116840608	0.11200	0.00000	0.00005	1included	HepG2	U2AF2
MXE	AMBP	ENSG00000106927.7	chr9	-	116837239	116837316	116838945	116839020	116836315	116836432	116840372	116840608	0.16100	0.00000	0.00000	1included	HepG2	HNRNPUL1
SE	AMBP	ENSG00000106927.7	chr9	-	116828349	116828556			116824956	116825038	116835204	116835306	-0.50000	0.00051	0.04080	excluded	HepG2	TIAL1

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AMBP

General Information

Functions

Localization

Domains (AlphaFold: AMBP)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AMBP is not avaliable on ENCORE database.

36 proteins are bound to AMBP RNA:

eCLIP assay for AMBP is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AMBP is not available on ENCORE database.

135 RBPs can affect the gene expression of AMBP :

The Knockdown/knockout RNA-Seq assay for AMBP is not available on ENCORE database.

5 RBPs can affect the splicing of AMBP :

The Knockdown/knockout RNA-Seq assay for AMBP is not avaliable on ENCORE database.