AGPAT5

General Information

Gene Name : AGPAT5
Gene ID : ENSG00000155189.11
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AGPAT5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	AGPAT5	ENSG00000155189.11	55.48	48.69	52.08	ENCSR000AEF
HepG2	AGPAT5	ENSG00000155189.11	15.83	28.51	22.17	ENCSR985KAT
K562	AGPAT5	ENSG00000155189.11	28.16	23.78	25.97	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AGPAT5 is not avaliable on ENCORE database.

Proteins bound to RNA

AGPAT5 RNA is bound by 29 proteins.

CanvasJS.com

eCLIP assay for AGPAT5 is not avaliable on ENCORE database.

29 proteins are bound to AGPAT5 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	6603562	6603660	+	intron-Distal	5.65251	38.85340	K562	PTBP1
chr8	6566188	6566335	+	5'-UTR,CDS	3.93827	34.04148	HepG2	DDX3X
chr8	6566390	6566454	+	CDS,intron-Proximal	6.01999	32.53241	HepG2	PRPF8
chr8	6603491	6603562	+	intron-Distal	6.97083	23.43457	K562	PTBP1
chr8	6614768	6614904	+	3'-UTR,CDS	3.71408	20.03381	HepG2	BCLAF1
chr8	6566117	6566188	+	5'-UTR	5.25487	19.75640	HepG2	DDX3X
chr8	6566386	6566449	+	CDS,intron-Proximal	3.68046	18.71227	K562	PRPF8
chr8	6614682	6614768	+	3'-UTR,CDS,intron-Proximal	4.30535	18.05569	HepG2	BCLAF1
chr8	6603570	6603649	+	intron-Distal	4.10237	15.99749	HepG2	PTBP1
chr8	6582179	6582277	+	intron-Distal	4.32688	15.96223	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 116 entries

eCLIP assay for AGPAT5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for AGPAT5 is not available on ENCORE database.
116 RBPs can affect the levels of AGPAT5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for AGPAT5 is not available on ENCORE database.

116 RBPs can affect the gene expression of AGPAT5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AGPAT5	ENSG00000155189.7	585.34090	1764.20780	-1.59170	67.07310	64.91430	HepG2	SF3B4
AGPAT5	ENSG00000155189.7	245.78080	1127.25250	-2.19740	61.54220	59.07100	HepG2	DDX21
AGPAT5	ENSG00000155189.7	575.07300	1565.69060	-1.44500	57.84670	55.20980	K562	UPF1
AGPAT5	ENSG00000155189.7	552.25640	1838.98200	-1.73550	32.94810	30.79340	HepG2	EIF4A3
AGPAT5	ENSG00000155189.7	697.89370	1385.10160	-0.98890	31.78020	30.08090	HepG2	CKAP4
AGPAT5	ENSG00000155189.7	361.80470	1187.88860	-1.71510	31.92150	29.86900	HepG2	HNRNPC
AGPAT5	ENSG00000155189.7	338.60290	919.37730	-1.44110	27.97720	26.16220	K562	HNRNPC
AGPAT5	ENSG00000155189.7	780.06950	1764.46790	-1.17760	27.24400	25.63690	HepG2	PUF60
AGPAT5	ENSG00000155189.7	347.06430	1067.98870	-1.62160	25.41130	23.80500	HepG2	HNRNPA1
AGPAT5	ENSG00000155189.7	403.54900	1146.82100	-1.50680	24.95290	23.73620	HepG2	TIAL1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 146 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for AGPAT5 is not available on ENCORE database.

5 RBPs can affect the splicing of AGPAT5 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	AGPAT5	ENSG00000155189.7	chr8	+	6605190	6605349			6590081	6590171	6612571	6612695	-0.09600	0.00005	0.00659	excluded	K562	HNRNPL
SE	AGPAT5	ENSG00000155189.7	chr8	+	6605190	6605349			6590081	6590171	6612571	6612695	-0.09600	0.00047	0.01505	excluded	K562	RBM15
SE	AGPAT5	ENSG00000155189.7	chr8	+	6582390	6582460			6565877	6566408	6612571	6612695	-0.31000	0.00083	0.03499	excluded	K562	PTBP1
SE	AGPAT5	ENSG00000155189.7	chr8	+	6605190	6605349			6590048	6590171	6612571	6612695	-0.10100	0.00110	0.01322	excluded	K562	AQR
SE	AGPAT5	ENSG00000155189.7	chr8	+	6582390	6582460			6565877	6566408	6588231	6588264	-0.28800	0.00112	0.03026	excluded	K562	AGGF1
MXE	AGPAT5	ENSG00000155189.7	chr8	+	6590081	6590171	6605190	6605349	6582390	6582460	6612571	6612695	0.05200	0.00430	0.03167	1included	K562	AQR

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AGPAT5

General Information

Functions

Localization

Domains (AlphaFold: AGPAT5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AGPAT5 is not avaliable on ENCORE database.

29 proteins are bound to AGPAT5 RNA:

eCLIP assay for AGPAT5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AGPAT5 is not available on ENCORE database.

116 RBPs can affect the gene expression of AGPAT5 :

The Knockdown/knockout RNA-Seq assay for AGPAT5 is not available on ENCORE database.

5 RBPs can affect the splicing of AGPAT5 :

The Knockdown/knockout RNA-Seq assay for AGPAT5 is not avaliable on ENCORE database.