ZSCAN5A

General Information

Gene Name : ZSCAN5A
Gene ID : ENSG00000131848.9
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZSCAN5A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZSCAN5A	ENSG00000131848.9	3.02	8.05	5.54	ENCSR000AEF
HepG2	ZSCAN5A	ENSG00000131848.9	13.82	14.20	14.01	ENCSR985KAT
K562	ZSCAN5A	ENSG00000131848.9	11.47	10.30	10.89	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZSCAN5A is not avaliable on ENCORE database.

Proteins bound to RNA

ZSCAN5A RNA is bound by 6 proteins.

eCLIP assay for ZSCAN5A is not avaliable on ENCORE database.

6 proteins are bound to ZSCAN5A RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	56825858	56825964	-	5'-UTR,intron-Distal,intron-Proximal	4.65238	3.77360	K562	GTF2F1
chr19	56825872	56825985	-	5'-UTR,intron-Distal,intron-Proximal	4.15576	12.35230	HepG2	RBFOX2
chr19	56825856	56825969	-	5'-UTR,intron-Distal,intron-Proximal	4.54339	3.89786	K562	RBFOX2
chr19	56825851	56825940	-	5'-UTR,intron-Distal,intron-Proximal	4.17494	3.30705	HepG2	GTF2F1
chr19	56825889	56825979	-	5'-UTR,intron-Distal,intron-Proximal	3.06021	4.88776	HepG2	PRPF4
chr19	56816014	56816083	-	intron-Distal	5.12716	13.27672	HepG2	PCBP2
chr19	56813438	56813626	-	intron-Distal	3.66035	3.77708	K562	GTF2F1
chr19	56821260	56821352	-	intron-Distal	4.00561	3.41442	HepG2	HNRNPK
chr19	56817588	56817679	-	intron-Distal	3.96692	5.92377	HepG2	MATR3
chr19	56817013	56817112	-	intron-Distal	4.08600	3.33944	K562	MATR3
chr19	56815926	56815997	-	intron-Distal	5.09886	7.79030	HepG2	PCBP2
chr19	56814429	56814504	-	intron-Distal	4.30063	6.53456	HepG2	PCBP2
chr19	56813424	56813540	-	intron-Distal	4.24396	10.39610	HepG2	PCBP2
chr19	56817012	56817062	-	intron-Distal	4.12098	3.96879	HepG2	MATR3
chr19	56817108	56817191	-	intron-Distal	4.75173	5.37222	HepG2	MATR3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for ZSCAN5A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZSCAN5A is not available on ENCORE database.
34 RBPs can affect the levels of ZSCAN5A.

The Knockdown/knockout RNA-Seq assay for ZSCAN5A is not available on ENCORE database.

34 RBPs can affect the gene expression of ZSCAN5A :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZSCAN5A	ENSG00000131848.5	259.48810	145.49750	0.83460	3.90400	3.28820	HepG2	AKAP1
ZSCAN5A	ENSG00000131848.5	216.51190	120.39610	0.84660	4.13870	3.18730	HepG2	ASCC1
ZSCAN5A	ENSG00000131848.5	187.14900	128.44310	0.54300	2.45580	1.82160	HepG2	CKAP4
ZSCAN5A	ENSG00000131848.5	192.42810	98.76690	0.96210	4.26110	3.14050	HepG2	EEF2
ZSCAN5A	ENSG00000131848.5	148.73920	80.18930	0.89120	3.40250	2.40590	HepG2	EIF3D
ZSCAN5A	ENSG00000131848.5	171.13240	249.05190	-0.54130	2.99690	2.37520	HepG2	ETF1
ZSCAN5A	ENSG00000131848.5	119.14660	71.40190	0.73860	2.32810	1.51310	HepG2	GEMIN5
ZSCAN5A	ENSG00000131848.5	146.32310	87.21550	0.74640	2.41010	1.37050	HepG2	GRSF1
ZSCAN5A	ENSG00000131848.5	146.61670	83.93420	0.80460	2.26210	1.31040	HepG2	METAP2
ZSCAN5A	ENSG00000131848.5	210.02980	148.71620	0.49790	2.35140	1.78220	HepG2	PCBP1
ZSCAN5A	ENSG00000131848.5	66.09530	148.73690	-1.17010	5.50710	4.58550	HepG2	RBM25
ZSCAN5A	ENSG00000131848.5	156.99640	95.41670	0.71830	3.22270	2.53820	HepG2	SAFB2
ZSCAN5A	ENSG00000131848.5	124.68130	235.10250	-0.91500	5.94660	5.28900	HepG2	SRFBP1
ZSCAN5A	ENSG00000131848.5	249.32680	164.44540	0.60030	3.19330	2.69470	HepG2	SRSF1
ZSCAN5A	ENSG00000131848.5	71.75300	147.83670	-1.04290	4.88430	4.17220	HepG2	TAF15
ZSCAN5A	ENSG00000131848.5	35.07800	85.05910	-1.27790	4.01620	3.35550	K562	AGGF1
ZSCAN5A	ENSG00000131848.5	48.14770	93.45790	-0.95680	3.08720	2.03420	K562	AKAP8
ZSCAN5A	ENSG00000131848.5	153.97660	94.31950	0.70700	2.54960	1.67670	K562	EFTUD2
ZSCAN5A	ENSG00000131848.5	132.30570	190.33520	-0.52470	2.15200	1.50420	K562	EIF2S2
ZSCAN5A	ENSG00000131848.5	229.28280	100.98910	1.18280	6.92390	5.18810	K562	EIF3D
ZSCAN5A	ENSG00000131848.5	137.98030	73.36660	0.91120	4.05340	3.10010	K562	EIF3G
ZSCAN5A	ENSG00000131848.5	121.48730	50.64860	1.26210	5.57170	4.41000	K562	EIF4A3
ZSCAN5A	ENSG00000131848.5	123.30460	52.67190	1.22700	5.37010	4.56550	K562	FXR1
ZSCAN5A	ENSG00000131848.5	194.52470	131.26360	0.56740	2.39250	1.41680	K562	HNRNPL
ZSCAN5A	ENSG00000131848.5	135.06190	213.05640	-0.65760	2.94160	2.12200	K562	HSPD1
ZSCAN5A	ENSG00000131848.5	51.00280	93.93450	-0.88110	2.22950	1.49840	K562	KIF1C
ZSCAN5A	ENSG00000131848.5	99.44020	59.04220	0.75200	2.33860	1.56220	K562	MAGOH
ZSCAN5A	ENSG00000131848.5	52.42240	105.22930	-1.00530	3.40030	2.37500	K562	MBNL1
ZSCAN5A	ENSG00000131848.5	122.65230	52.52600	1.22340	5.00020	3.67670	K562	PCBP2
ZSCAN5A	ENSG00000131848.5	98.35140	57.36600	0.77770	2.51370	1.87660	K562	PTBP1
ZSCAN5A	ENSG00000131848.5	565.81920	228.77090	1.30630	17.56510	15.45410	K562	PUF60
ZSCAN5A	ENSG00000131848.5	43.02560	85.52420	-0.99110	2.86380	2.26180	K562	RBM15
ZSCAN5A	ENSG00000131848.5	65.66420	27.54910	1.25300	2.36230	1.44600	K562	RPS3
ZSCAN5A	ENSG00000131848.5	101.46800	56.24200	0.85120	2.60910	1.92010	K562	SRSF1
ZSCAN5A	ENSG00000131848.5	170.63360	115.91810	0.55770	2.11880	1.39890	K562	SYNCRIP
ZSCAN5A	ENSG00000131848.5	126.41320	56.91150	1.15130	5.00180	4.03540	K562	TARDBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZSCAN5A is not available on ENCORE database.

1 RBPs can affect the splicing of ZSCAN5A :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	ZSCAN5A	ENSG00000131848.5	chr19	-	56825618	56825712			56824651	56824753	56826049	56826294	0.40900	0.00166	0.03136	included	HepG2	U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZSCAN5A

General Information

Functions

Localization

Domains (AlphaFold: ZSCAN5A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZSCAN5A is not avaliable on ENCORE database.

6 proteins are bound to ZSCAN5A RNA:

eCLIP assay for ZSCAN5A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZSCAN5A is not available on ENCORE database.

34 RBPs can affect the gene expression of ZSCAN5A :

The Knockdown/knockout RNA-Seq assay for ZSCAN5A is not available on ENCORE database.

1 RBPs can affect the splicing of ZSCAN5A :

The Knockdown/knockout RNA-Seq assay for ZSCAN5A is not avaliable on ENCORE database.