ZNF200

General Information

Gene Name       : ZNF200
Gene ID             : ENSG00000010539.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF200)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF200ENSG00000010539.117.096.066.57ENCSR000AEF
HepG2ZNF200ENSG00000010539.117.6810.389.03ENCSR985KAT
K562ZNF200ENSG00000010539.117.976.177.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF200 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF200 RNA is bound by 4 proteins.  







eCLIP assay for ZNF200 is not avaliable on ENCORE database.





4 proteins are bound to ZNF200 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1632743953274505-CDS,intron-Distal3.169114.26492HepG2BCLAF1
chr1632843983284452-intron-Distal5.808686.40067K562PTBP1
chr1632854663285521-intron-Distal,intron-Proximal4.880633.19125K562GTF2F1
chr1632842113284244-intron-Distal,intron-Proximal3.635803.97268K562PTBP1
chr1632843703284458-intron-Distal5.6011112.60586HepG2PTBP1
chr1632854683285525-intron-Distal,intron-Proximal5.481195.84761K562FAM120A
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF200 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF200 is not available on ENCORE database.

  • 43 RBPs can affect the levels of ZNF200.  








The Knockdown/knockout RNA-Seq assay for ZNF200 is not available on ENCORE database.





43 RBPs can affect the gene expression of ZNF200 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF200ENSG00000010539.7285.37360193.957100.557002.727602.13320HepG2BOP1
ZNF200ENSG00000010539.7333.93400226.212000.561802.161801.49040HepG2CNOT7
ZNF200ENSG00000010539.7635.63660469.574400.436704.047003.34410HepG2ETF1
ZNF200ENSG00000010539.7399.00220291.426200.453201.892501.34460HepG2MAGOH
ZNF200ENSG00000010539.7273.77960356.96790-0.382801.898901.39180HepG2PUF60
ZNF200ENSG00000010539.7320.26360247.308700.372802.070501.51950HepG2PUS1
ZNF200ENSG00000010539.7529.37100392.484800.431503.206702.65970HepG2RBM22
ZNF200ENSG00000010539.7340.57000240.284900.503102.223801.34360HepG2RBM27
ZNF200ENSG00000010539.7394.94970279.960900.496302.300301.68490HepG2SF3A3
ZNF200ENSG00000010539.7252.37740342.25070-0.439502.829102.11950HepG2SLBP
ZNF200ENSG00000010539.7168.66230246.03390-0.544702.738202.04550HepG2SRSF7
ZNF200ENSG00000010539.7501.96890384.921700.382903.001402.47180HepG2SSB
ZNF200ENSG00000010539.7359.40230192.602000.899906.420605.48120HepG2U2AF1
ZNF200ENSG00000010539.7119.91330222.27350-0.890305.333304.58670K562AGGF1
ZNF200ENSG00000010539.7142.78930231.28280-0.695803.498302.75960K562AKAP8L
ZNF200ENSG00000010539.71495.89210492.364201.6031036.5688034.64250K562AQR
ZNF200ENSG00000010539.7269.04280186.460500.528902.579701.82120K562CPSF6
ZNF200ENSG00000010539.7442.06650325.845600.440002.894502.22790K562DDX47
ZNF200ENSG00000010539.7329.78920218.875400.591303.457402.43190K562EFTUD2
ZNF200ENSG00000010539.7343.67620234.414900.551902.501001.52360K562EIF3D
ZNF200ENSG00000010539.7325.92860160.731101.019808.469507.03190K562EIF4A3
ZNF200ENSG00000010539.7427.31800167.153501.3540018.0256016.59150K562FXR1
ZNF200ENSG00000010539.7274.12430172.240200.670302.760702.05450K562G3BP2
ZNF200ENSG00000010539.7300.23680179.789400.739704.410803.67480K562HNRNPC
ZNF200ENSG00000010539.7435.80340266.798600.707802.717701.30890K562ILF2
ZNF200ENSG00000010539.7152.80580245.45880-0.683803.330902.41660K562KIF1C
ZNF200ENSG00000010539.7351.73690237.408800.567003.643802.67150K562MAGOH
ZNF200ENSG00000010539.7729.08520517.311200.495003.864602.53430K562MSI2
ZNF200ENSG00000010539.7258.06290160.499900.685103.867702.39190K562NCBP2
ZNF200ENSG00000010539.7791.82550530.745700.577105.722603.53380K562NOL12
ZNF200ENSG00000010539.7108.52450232.18890-1.097302.395401.48810K562PABPN1
ZNF200ENSG00000010539.7292.80060211.243800.470902.266001.38550K562PCBP2
ZNF200ENSG00000010539.7302.14330199.219000.600803.528802.61720K562POLR2G
ZNF200ENSG00000010539.7408.09260212.989300.938007.435306.20730K562PRPF8
ZNF200ENSG00000010539.7353.31660230.654000.615104.349003.53400K562PTBP1
ZNF200ENSG00000010539.7939.58890529.521500.8272011.174409.52500K562PUF60
ZNF200ENSG00000010539.7805.74800563.023100.517005.928104.31310K562PUM1
ZNF200ENSG00000010539.7117.55740229.38930-0.964405.473004.74110K562PUS1
ZNF200ENSG00000010539.7114.12610223.48850-0.969605.999105.15200K562RBM15
ZNF200ENSG00000010539.7381.15400221.195700.785002.874002.01390K562RBM22
ZNF200ENSG00000010539.7220.47480147.114200.583602.519101.57670K562RCC2
ZNF200ENSG00000010539.7102.29890212.43300-1.054202.732401.54150K562SF1
ZNF200ENSG00000010539.7330.02460226.112400.545403.080202.33790K562SRSF1
ZNF200ENSG00000010539.7312.65600199.812900.645804.159703.14720K562SYNCRIP
ZNF200ENSG00000010539.7391.53850228.852100.774605.834604.78170K562TARDBP
ZNF200ENSG00000010539.7105.66100164.75820-0.640902.307401.45540K562TRIM56
ZNF200ENSG00000010539.7356.42780172.694001.045306.085304.89960K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF200 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ZNF200 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ZNF200 is not avaliable on ENCORE database.