TICAM2

General Information

Gene Name       : TICAM2
Gene ID             : ENSG00000243414.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TICAM2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TICAM2ENSG00000243414.54.994.754.87ENCSR000AEF
HepG2TICAM2ENSG00000243414.50.000.000.00ENCSR985KAT
K562TICAM2ENSG00000243414.50.001.200.60ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TICAM2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TICAM2 RNA is bound by 15 proteins.  







eCLIP assay for TICAM2 is not avaliable on ENCORE database.





15 proteins are bound to TICAM2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr5114961444114961512-3'-UTR,5'-UTR,CDS,intron-Distal4.8970230.19477HepG2RPS3
chr5114961455114961518-3'-UTR,5'-UTR,CDS,intron-Distal4.9970047.26304HepG2DDX3X
chr5114961603114961691-3'-UTR,5'-UTR,intron-Distal,intron-Proximal4.2126440.43731HepG2DDX3X
chr5114961518114961595-3'-UTR,5'-UTR,intron-Distal5.0367167.18258HepG2DDX3X
chr5114961542114961615-3'-UTR,5'-UTR,intron-Distal3.118715.83673K562SND1
chr5114961631114961697-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.9618412.73259HepG2RPS3
chr5114961515114961593-3'-UTR,5'-UTR,intron-Distal4.9011839.74331HepG2RPS3
chr5114961616114961697-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.419314.35063K562GEMIN5
chr5114956115114956195-CDS,intron-Distal,intron-Proximal3.716615.36986K562RBM15
chr5114961310114961324-CDS,intron-Distal3.451503.49838K562SND1
chr5114952003114952079-5'-UTR,CDS,intron-Distal,intron-Proximal3.263428.35637HepG2SND1
chr5114961299114961371-CDS,intron-Distal3.868729.20626HepG2SND1
chr5114956130114956197-CDS,intron-Distal,intron-Proximal4.122566.71529K562IGF2BP1
chr5114961373114961444-CDS,intron-Distal3.9471618.09796HepG2RPS3
chr5114961371114961455-CDS,intron-Distal4.2680148.73182HepG2DDX3X
chr5114952107114952143-CDS,intron-Distal,intron-Proximal3.498743.77917HepG2SND1
chr5114952011114952136-5'-UTR,CDS,intron-Distal,intron-Proximal4.0264911.02166K562SND1
chr5114952026114952087-CDS,intron-Distal4.362915.16052K562RBM15
chr5114949825114949888-3'-UTR,intron-Distal4.636975.03175K562IGF2BP1
chr5114950564114950623-3'-UTR,intron-Distal3.410623.46148HepG2TIA1
chr5114950833114950898-3'-UTR,intron-Distal3.0672810.93089K562FAM120A
chr5114949869114949925-3'-UTR,intron-Distal3.631348.45237K562FAM120A
chr5114951599114951705-3'-UTR,intron-Distal,intron-Proximal4.7971310.26194K562IGF2BP1
chr5114944364114944443-intron-Distal4.140953.66668K562KHSRP
chr5114950828114950918-3'-UTR,intron-Distal5.308708.79416HepG2TIA1
chr5114949438114949505-3'-UTR,intron-Distal4.048424.76828K562IGF2BP1
chr5114950826114950917-3'-UTR,intron-Distal3.579973.05548HepG2TIAL1
chr5114950376114950439-3'-UTR,intron-Distal5.1808713.97136K562FAM120A
chr5114949692114949750-3'-UTR,intron-Distal4.7709715.26648K562IGF2BP1
chr5114950803114950903-3'-UTR,intron-Distal3.829608.60023K562TIA1
chr5114951038114951075-3'-UTR,intron-Distal3.161728.97171HepG2FAM120A
chr5114951743114951854-3'-UTR,intron-Distal,intron-Proximal3.760288.76917K562IGF2BP1
chr5114950558114950618-3'-UTR,intron-Distal3.4636115.15930K562TIA1
chr5114951955114952003-CDS,intron-Distal,intron-Proximal3.987386.35450HepG2SND1
chr5114950978114951074-3'-UTR,intron-Distal3.9462117.87060K562FAM120A
chr5114949312114949381-3'-UTR,intron-Distal3.292196.06881K562PUM2
chr5114943342114943382-intron-Distal3.694063.02234K562KHSRP
chr5114942943114942995-intron-Distal3.152833.90146K562KHSRP
chr5114951726114951811-3'-UTR,intron-Distal,intron-Proximal3.682375.19548K562IGF2BP2
chr5114949257114949303-3'-UTR,intron-Distal4.9767611.30955K562PABPC4
chr5114950686114950795-3'-UTR,intron-Distal4.3586314.11369HepG2FUBP3
chr5114950561114950625-3'-UTR,intron-Distal3.692644.98667HepG2UPF1
chr5114951909114952000-CDS,intron-Distal,intron-Proximal3.275354.25038K562SND1
chr5114949647114949692-3'-UTR,intron-Distal4.092868.45080K562IGF2BP1
chr5114950470114950560-3'-UTR,intron-Distal3.3641211.96465K562FAM120A
chr5114950123114950191-3'-UTR,intron-Distal4.8711319.04824K562FAM120A
chr5114943069114943109-intron-Distal3.694063.02234K562KHSRP
chr5114950191114950240-3'-UTR,intron-Distal3.584399.43165K562FAM120A
chr5114950193114950226-3'-UTR,intron-Distal4.803444.56734HepG2FAM120A
chr5114950539114950622-3'-UTR,intron-Distal3.9312618.98472HepG2FAM120A
chr5114951609114951667-3'-UTR,intron-Distal,intron-Proximal4.385315.09622HepG2IGF2BP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TICAM2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TICAM2 is not available on ENCORE database.

  • 38 RBPs can affect the levels of TICAM2.  








The Knockdown/knockout RNA-Seq assay for TICAM2 is not available on ENCORE database.





38 RBPs can affect the gene expression of TICAM2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TICAM2ENSG00000243414.49.8310083.96170-3.094305.207403.85010HepG2CCAR1
TICAM2ENSG00000243414.475.004609.038403.052709.057107.18490HepG2CPSF7
TICAM2ENSG00000243414.447.747400.0000099999.999905.988604.34650HepG2GRSF1
TICAM2ENSG00000243414.416.951200.0000099999.999902.219201.34710HepG2IGF2BP3
TICAM2ENSG00000243414.40.0000088.55000-99999.9999915.0924013.19340HepG2LARP4
TICAM2ENSG00000243414.419.193900.0000099999.999906.488505.39500HepG2PPIL4
TICAM2ENSG00000243414.447.064100.0000099999.9999013.5861010.56270HepG2RBM47
TICAM2ENSG00000243414.423.850600.0000099999.999901.946401.38990HepG2SAFB2
TICAM2ENSG00000243414.448.811002.608504.225807.758805.33400HepG2SNRNP200
TICAM2ENSG00000243414.437.135005.793902.680105.313304.59310HepG2SRSF9
TICAM2ENSG00000243414.427.175700.0000099999.999909.212407.11850HepG2STIP1
TICAM2ENSG00000243414.436.358600.0000099999.999907.948106.89570HepG2SUPV3L1
TICAM2ENSG00000243414.424.575900.0000099999.999908.064707.18080HepG2TRIM56
TICAM2ENSG00000243414.4152.979803.061705.642804.364603.11340HepG2U2AF2
TICAM2ENSG00000243414.428.220200.0000099999.999908.946307.96960HepG2UTP3
TICAM2ENSG00000243414.422.140800.0000099999.999907.129505.37280HepG2XPO5
TICAM2ENSG00000243414.434.866500.0000099999.999903.296002.71430HepG2ZNF622
TICAM2ENSG00000243414.4140.634600.0000099999.9999023.6394020.53620K562CCDC124
TICAM2ENSG00000243414.435.043600.532606.039804.645702.98540K562CIRBP
TICAM2ENSG00000243414.4203.5323048.496402.069203.932602.99770K562CPSF6
TICAM2ENSG00000243414.487.913700.0000099999.999902.734201.86630K562DKC1
TICAM2ENSG00000243414.451.177300.0000099999.9999015.5326014.03750K562EIF2S2
TICAM2ENSG00000243414.467.3305014.780702.187506.496803.68150K562EIF3H
TICAM2ENSG00000243414.474.652500.0000099999.9999017.4654015.51980K562GRSF1
TICAM2ENSG00000243414.419.656400.497305.304704.948003.24390K562HNRNPK
TICAM2ENSG00000243414.492.743700.0000099999.9999015.7954013.22850K562KIF1C
TICAM2ENSG00000243414.4140.6079030.169002.220406.761903.37080K562LARP4
TICAM2ENSG00000243414.412.954500.522204.632703.381002.44550K562MAGOH
TICAM2ENSG00000243414.4149.404000.0000099999.9999017.4900014.17210K562MAK16
TICAM2ENSG00000243414.429.642100.521705.828206.511405.01500K562MATR3
TICAM2ENSG00000243414.485.691600.0000099999.9999013.2742011.06190K562MBNL1
TICAM2ENSG00000243414.473.838100.0000099999.9999023.6552020.30630K562NAA15
TICAM2ENSG00000243414.439.090700.465306.392405.764004.34220K562PCBP2
TICAM2ENSG00000243414.452.945500.507006.706205.891004.95210K562PTBP1
TICAM2ENSG00000243414.490.048800.0000099999.999905.794905.04420K562PUS1
TICAM2ENSG00000243414.459.836300.0000099999.9999020.4161018.75550K562RBM15
TICAM2ENSG00000243414.428.693600.474405.918408.330705.69010K562RBM34
TICAM2ENSG00000243414.492.717501.420906.0279019.2834016.38180K562SRSF4
TICAM2ENSG00000243414.414.3856049.56930-1.784804.457902.67620K562UBE2L3
TICAM2ENSG00000243414.4128.7683021.488402.5830013.2048011.18090K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TICAM2 is not available on ENCORE database.





1 RBPs can affect the splicing of TICAM2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETICAM2ENSG00000243414.4chr5-114952014114952142114914346114917012114956131114956377-0.063000.000420.00589excludedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TICAM2 is not avaliable on ENCORE database.