TBXAS1

General Information

Gene Name       : TBXAS1
Gene ID             : ENSG00000059377.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TBXAS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TBXAS1ENSG00000059377.1622.3515.4918.92ENCSR000AEF
HepG2TBXAS1ENSG00000059377.162.261.962.11ENCSR985KAT
K562TBXAS1ENSG00000059377.161.611.331.47ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TBXAS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TBXAS1 RNA is bound by 3 proteins.  







eCLIP assay for TBXAS1 is not avaliable on ENCORE database.





3 proteins are bound to TBXAS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr7139478131139478211+5'-UTR,intron-Distal3.531014.12907HepG2FASTKD2
chr7139477998139478082+5'-UTR,intron-Distal,intron-Proximal4.680364.68055HepG2CSTF2T
chr7139478161139478226+5'-UTR,intron-Distal3.378994.21158HepG2CSTF2T
chr7139482576139482711+intron-Distal,intron-Proximal4.214824.27936HepG2PTBP1
chr7139477889139477937+intron-Distal3.163673.48399HepG2CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TBXAS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TBXAS1 is not available on ENCORE database.

  • 37 RBPs can affect the levels of TBXAS1.  








The Knockdown/knockout RNA-Seq assay for TBXAS1 is not available on ENCORE database.





37 RBPs can affect the gene expression of TBXAS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TBXAS1ENSG00000059377.11225.2507060.771201.8900012.2413011.20130HepG2AKAP1
TBXAS1ENSG00000059377.1170.5159038.897600.858202.050201.44250HepG2AUH
TBXAS1ENSG00000059377.1155.4568016.799501.722803.181002.21550HepG2BCLAF1
TBXAS1ENSG00000059377.11182.6286035.454702.3648013.9909012.32410HepG2CNOT7
TBXAS1ENSG00000059377.11138.5077059.996201.206906.566205.65580HepG2CELF1
TBXAS1ENSG00000059377.1114.8350038.20990-1.364902.343801.71240HepG2DDX21
TBXAS1ENSG00000059377.11104.6814049.987101.066303.326002.65550HepG2DDX6
TBXAS1ENSG00000059377.1110.0501033.83240-1.751202.963602.24080HepG2DNAJC21
TBXAS1ENSG00000059377.1170.6866021.881701.691604.375803.25810HepG2EIF3D
TBXAS1ENSG00000059377.11150.7543051.724901.543206.595805.56590HepG2EIF4B
TBXAS1ENSG00000059377.1154.9025019.566101.488403.666402.30060HepG2FAM120A
TBXAS1ENSG00000059377.1196.6381050.302000.941902.611501.93110HepG2HNRNPK
TBXAS1ENSG00000059377.11116.9374058.738100.993304.487503.64530HepG2HNRNPL
TBXAS1ENSG00000059377.1164.2980022.897801.489502.478401.48010HepG2METAP2
TBXAS1ENSG00000059377.1110.6936032.38820-1.598702.386601.57430HepG2PABPC1
TBXAS1ENSG00000059377.11124.2426037.356201.733606.711805.48170HepG2PARN
TBXAS1ENSG00000059377.11121.0537049.365101.294005.900005.06650HepG2PCBP1
TBXAS1ENSG00000059377.11189.8725050.223601.9185015.0821014.00220HepG2PTBP1
TBXAS1ENSG00000059377.11210.7414064.814601.7010016.7247015.52080HepG2PUM1
TBXAS1ENSG00000059377.1130.7506064.76290-1.074602.349401.72980HepG2PUM2
TBXAS1ENSG00000059377.11110.4328024.391902.178606.325505.46250HepG2PUS1
TBXAS1ENSG00000059377.11141.0610045.733001.624906.240805.20500HepG2RAVER1
TBXAS1ENSG00000059377.1142.4724014.489701.551402.107501.41300HepG2RRP9
TBXAS1ENSG00000059377.1113.9824036.77560-1.395102.416801.78790HepG2SF3A3
TBXAS1ENSG00000059377.1175.0740039.192000.937702.575701.95140HepG2SMN1
TBXAS1ENSG00000059377.1119.3119054.58690-1.499103.504002.98800HepG2SRSF1
TBXAS1ENSG00000059377.118.8541025.38450-1.519502.203301.36050HepG2SUPT6H
TBXAS1ENSG00000059377.1140.9058012.684201.689202.604101.63410HepG2TFIP11
TBXAS1ENSG00000059377.116.5206036.65780-2.491003.882703.31140HepG2TIAL1
TBXAS1ENSG00000059377.1192.6699037.007301.324203.282102.67960HepG2TRIM56
TBXAS1ENSG00000059377.11109.2714032.174101.763806.119005.20150HepG2U2AF1
TBXAS1ENSG00000059377.1118.9864050.31310-1.406002.994501.88910HepG2XRCC6
TBXAS1ENSG00000059377.1132.358209.598701.753102.599101.83780K562CPSF6
TBXAS1ENSG00000059377.1152.5334014.593301.847804.740703.83140K562EIF2S2
TBXAS1ENSG00000059377.1130.845009.764701.659302.261101.48510K562FMR1
TBXAS1ENSG00000059377.1157.9762026.155201.148302.344101.30940K562MSI2
TBXAS1ENSG00000059377.1164.8470027.902001.216602.876901.89880K562PUM2
TBXAS1ENSG00000059377.1148.2672019.968101.273202.668601.86730K562SF3A3
TBXAS1ENSG00000059377.1184.2664030.184601.481004.677402.86080K562UBE2L3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TBXAS1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TBXAS1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TBXAS1 is not avaliable on ENCORE database.