TBC1D10A

General Information

Gene Name       : TBC1D10A
Gene ID             : ENSG00000099992.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TBC1D10A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TBC1D10AENSG00000099992.151.295.403.35ENCSR000AEF
HepG2TBC1D10AENSG00000099992.154.362.063.21ENCSR985KAT
K562TBC1D10AENSG00000099992.154.502.893.70ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TBC1D10A is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on TBC1D10A RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for TBC1D10A is not avaliable on ENCORE database.






NO known proteins are bound to TBC1D10A RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for TBC1D10A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TBC1D10A is not available on ENCORE database.

  • 50 RBPs can affect the levels of TBC1D10A.  








The Knockdown/knockout RNA-Seq assay for TBC1D10A is not available on ENCORE database.





50 RBPs can affect the gene expression of TBC1D10A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TBC1D10AENSG00000099992.11183.03400121.926700.586002.691202.09090HepG2ACO1
TBC1D10AENSG00000099992.11166.4749089.587600.893803.519202.35190HepG2AKAP8
TBC1D10AENSG00000099992.11199.44990106.543700.904502.615301.98860HepG2CELF1
TBC1D10AENSG00000099992.11222.80290135.709000.715203.049002.39720HepG2DDX3X
TBC1D10AENSG00000099992.11142.1915075.493000.913302.904602.11490HepG2DDX55
TBC1D10AENSG00000099992.11343.79370116.597301.5599013.4990012.26230HepG2DDX6
TBC1D10AENSG00000099992.11119.1557066.403600.843403.193302.44250HepG2DNAJC21
TBC1D10AENSG00000099992.11187.06350123.838000.595002.040101.48860HepG2EIF4A3
TBC1D10AENSG00000099992.11183.13770119.167900.619802.077901.36610HepG2LARP4
TBC1D10AENSG00000099992.11169.11710108.362500.642101.998701.30580HepG2MSI2
TBC1D10AENSG00000099992.11233.3686075.616901.625709.679507.97960HepG2PABPC1
TBC1D10AENSG00000099992.11217.49110115.027100.918905.410004.48660HepG2PUM2
TBC1D10AENSG00000099992.11123.3760074.422500.729202.255501.52800HepG2RPS2
TBC1D10AENSG00000099992.11221.23350116.597000.923904.738103.84070HepG2SF3A3
TBC1D10AENSG00000099992.11122.3278071.065200.783402.637501.70350HepG2SMNDC1
TBC1D10AENSG00000099992.11227.64730166.931700.447402.038401.58780HepG2SRFBP1
TBC1D10AENSG00000099992.11154.03380107.067200.524601.941901.40580HepG2SRSF5
TBC1D10AENSG00000099992.11142.6193090.407400.657602.183601.34290HepG2SUPT6H
TBC1D10AENSG00000099992.11139.4467075.152700.891702.714302.04290HepG2SUPV3L1
TBC1D10AENSG00000099992.1185.75640132.64510-0.629302.099001.59790HepG2TAF15
TBC1D10AENSG00000099992.11126.8947071.988700.817703.026602.50720HepG2TIAL1
TBC1D10AENSG00000099992.11119.1019072.618400.713702.617902.06570HepG2TRIM56
TBC1D10AENSG00000099992.11180.32470113.724200.665003.337202.75300HepG2ZNF622
TBC1D10AENSG00000099992.11325.67320179.353800.860507.414706.55090K562AGGF1
TBC1D10AENSG00000099992.11275.68340197.105100.483902.556801.61770K562AKAP8
TBC1D10AENSG00000099992.11381.07430186.631201.029809.822508.49520K562AKAP8L
TBC1D10AENSG00000099992.11361.83200183.977900.975707.312206.43160K562AQR
TBC1D10AENSG00000099992.11106.5397062.231000.775602.320801.36950K562CSTF2
TBC1D10AENSG00000099992.11146.6983079.944600.875703.259902.26340K562EFTUD2
TBC1D10AENSG00000099992.11222.96950105.534101.079005.378304.42360K562EIF2S2
TBC1D10AENSG00000099992.1112.2275038.42480-1.651902.116201.50980K562G3BP2
TBC1D10AENSG00000099992.11126.8254071.536600.826002.797401.99870K562GPKOW
TBC1D10AENSG00000099992.11176.8339086.787801.026703.802202.52680K562IGF2BP2
TBC1D10AENSG00000099992.11316.78730221.860900.513802.919701.97790K562MBNL1
TBC1D10AENSG00000099992.11247.06470124.860500.984503.470202.32570K562PABPN1
TBC1D10AENSG00000099992.1182.32030151.16230-0.876802.022601.31240K562PCBP3
TBC1D10AENSG00000099992.1163.02310115.93270-0.879302.411101.66520K562POLR2G
TBC1D10AENSG00000099992.11148.6370088.186900.753103.037002.17190K562PPIG
TBC1D10AENSG00000099992.11134.5319077.795600.790102.458001.74990K562PRPF8
TBC1D10AENSG00000099992.11176.1963082.949401.086802.582401.71460K562PSIP1
TBC1D10AENSG00000099992.11409.63800185.047501.146405.720504.97360K562PUS1
TBC1D10AENSG00000099992.11279.84340180.333600.633902.809102.21230K562RBM15
TBC1D10AENSG00000099992.11161.3102084.866600.926503.463902.51790K562RBM22
TBC1D10AENSG00000099992.11143.8944075.678600.927003.946502.76070K562RCC2
TBC1D10AENSG00000099992.11232.47110114.180801.025603.067201.78020K562SF1
TBC1D10AENSG00000099992.11107.1721039.868701.426505.912104.62740K562SF3B4
TBC1D10AENSG00000099992.11134.3823086.816000.630202.049101.43020K562SRSF1
TBC1D10AENSG00000099992.11130.8326082.012200.673702.341701.38920K562SRSF5
TBC1D10AENSG00000099992.11153.3657087.845200.803803.324302.54680K562TARDBP
TBC1D10AENSG00000099992.11158.5315084.741400.903504.125603.09690K562TIA1
TBC1D10AENSG00000099992.11137.3269083.199800.722902.496501.47070K562TRA2A
TBC1D10AENSG00000099992.11160.4552084.757600.920704.046002.85760K562TRIM56
TBC1D10AENSG00000099992.11300.03250187.658800.676902.595101.35680K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TBC1D10A is not available on ENCORE database.





3 RBPs can affect the splicing of TBC1D10A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETBC1D10AENSG00000099992.11chr22-3068914730689308306879983068884030689639306897940.334000.000310.00451includedK562AQR
SETBC1D10AENSG00000099992.11chr22-3068914730689308306879983068884030689639306897940.368000.000610.09820includedK562HNRNPA1
A3SSTBC1D10AENSG00000099992.11chr22-3070051930700640307005193070061930722661307228900.216000.011850.06108longerK562AQR
RITBC1D10AENSG00000099992.11chr22-3068963930690099306896393068979430689909306900990.240000.005480.04830includedHepG2RBM22

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TBC1D10A is not avaliable on ENCORE database.