SRP14-AS1

General Information

Gene Name       : SRP14-AS1
Gene ID             : ENSG00000248508.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SRP14-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SRP14-AS1ENSG00000248508.63.922.703.31ENCSR000AEF
HepG2SRP14-AS1ENSG00000248508.60.760.730.74ENCSR985KAT
K562SRP14-AS1ENSG00000248508.63.553.753.65ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SRP14-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • SRP14-AS1 RNA is bound by 13 proteins.  







eCLIP assay for SRP14-AS1 is not avaliable on ENCORE database.





13 proteins are bound to SRP14-AS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr154034558040345610+intron-Distal3.821163.37414K562CSTF2T
chr154034336640343430+intron-Distal4.544599.67020HepG2CSTF2T
chr154034317640343280+intron-Distal5.5980831.78151K562CSTF2T
chr154034321540343278+intron-Distal5.773769.20567HepG2FAM120A
chr154034206440342138+intron-Distal5.763449.11946K562FAM120A
chr154034368240343747+intron-Distal5.3533015.60894K562FAM120A
chr154034306240343118+intron-Distal5.8100015.60039K562CSTF2T
chr154034573040345821+intron-Distal3.702085.02933K562CSTF2T
chr154034702740347099+intron-Distal3.876743.38753K562FAM120A
chr154034366240343801+intron-Distal3.014313.00209K562FUS
chr154034323440343260+intron-Distal5.434194.56463K562GEMIN5
chr154034245940342533+intron-Distal5.5582213.68854K562CSTF2T
chr154034337540343419+intron-Distal5.0865110.49968K562EIF4G2
chr154034291540343002+intron-Distal5.257437.56775K562EWSR1
chr154034304040343087+intron-Distal4.872706.58550HepG2CSTF2T
chr154034307140343109+intron-Distal4.653665.92397HepG2FAM120A
chr154034282340342875+intron-Distal6.1571015.71267K562FAM120A
chr154034330740343364+intron-Distal3.881307.13178K562CSTF2T
chr154034546840345525+intron-Distal3.345546.62443K562CSTF2T
chr154034183040341927+intron-Distal5.9301310.00047K562EIF4G2
chr154034301740343106+intron-Distal4.595474.94157HepG2IGF2BP1
chr154034301840343119+intron-Distal5.3612410.76525K562EWSR1
chr154034219940342245+intron-Distal3.792946.60399K562CSTF2T
chr154034605940346096+intron-Distal3.140793.62708K562CSTF2T
chr154034273940342878+intron-Distal7.0609345.05608K562EIF4G2
chr154034829540348321+intron-Distal3.393323.38753K562FAM120A
chr154034276940342880+intron-Distal6.0589217.12905HepG2FAM120A
chr154034246340342538+intron-Distal6.2115717.21435K562FAM120A
chr154034744240347549+intron-Distal4.114876.88653K562CSTF2T
chr154034278240342879+intron-Distal6.2903019.33537K562CSTF2T
chr154034300340343067+intron-Distal5.368089.60876HepG2FAM120A
chr154034246440342517+intron-Distal3.650893.92299HepG2CSTF2T
chr154034317040343275+intron-Distal6.7380952.15358K562EIF4G2
chr154034273240342843+intron-Distal4.990036.83585HepG2IGF2BP1
chr154034542940345530+intron-Distal3.148254.21686K562EIF4G2
chr154034162040341662+intron-Distal4.581575.40707K562CSTF2T
chr154034816940348228+intron-Distal3.337573.74491K562CSTF2T
chr154034429340344372+intron-Distal3.998644.05367K562ILF3
chr154034314540343268+intron-Distal3.323284.87629K562FUS
chr154034095240340983+intron-Distal4.279763.26170K562EIF4G2
chr154034291240342987+intron-Distal6.9853420.42309K562EIF4G2
chr154034728140347328+intron-Distal4.703085.38606K562FAM120A
chr154034818740348224+intron-Distal3.730314.66555K562FAM120A
chr154034193340341946+intron-Distal4.085105.10007K562FAM120A
chr154034302140343062+intron-Distal5.4332810.67647K562CSTF2T
chr154034291340342990+intron-Distal5.7675615.60039K562CSTF2T
chr154034276140342892+intron-Distal6.9541423.48511HepG2DKC1
chr154034293840342987+intron-Distal3.862246.03429HepG2CSTF2T
chr154034596840346106+intron-Distal4.0603813.64964K562FAM120A
chr154034049040340604+intron-Distal4.383425.10007K562FAM120A
chr154034542740345535+intron-Distal3.701973.01619K562FUS
chr154034321140343272+intron-Distal5.076384.65580K562GTF2F1
chr154034330940343350+intron-Distal4.8859110.50068K562FAM120A
chr154034301240343066+intron-Distal7.3759125.93204K562EIF4G2
chr154034330440343355+intron-Distal4.480974.14056K562EWSR1
chr154034279340342888+intron-Distal5.6264910.76825K562EWSR1
chr154034291740342994+intron-Distal4.239873.73296HepG2IGF2BP1
chr154034186640341938+intron-Distal4.215029.13279K562CSTF2T
chr154034280840342885+intron-Distal5.3460311.61783HepG2CSTF2T
chr154034306640343134+intron-Distal7.5722534.98178K562EIF4G2
chr154034187940341941+intron-Distal4.448884.36133HepG2CSTF2T
chr154034365840343759+intron-Distal4.3727712.59491K562CSTF2T
chr154034280240342880+intron-Distal5.056063.48173K562GTF2F1
chr154034292540342997+intron-Distal5.553209.47368HepG2FAM120A
chr154034213840342239+intron-Distal6.4739018.65422K562FAM120A
chr154034319740343262+intron-Distal5.678146.27110K562DDX52
chr154034336040343419+intron-Distal5.2251514.20681K562FAM120A
chr154034253340342581+intron-Distal5.081578.61093K562CSTF2T
chr154034320440343276+intron-Distal6.3492421.52584HepG2CSTF2T
chr154034375940343803+intron-Distal3.284365.34585K562CSTF2T
chr154034322640343281+intron-Distal6.3783131.26479K562FAM120A
chr154034304540343079+intron-Distal4.7837611.42186K562FAM120A
chr154034316840343275+intron-Distal6.1927215.76817K562EWSR1
chr154034291340342932+intron-Distal4.975754.28084HepG2DKC1
chr154034247340342520+intron-Distal5.1834410.02297K562EIF4G2
chr154034374740343815+intron-Distal6.3395214.82037K562FAM120A
chr154034316840343205+intron-Distal5.321914.43467K562FASTKD2
chr154034539040345468+intron-Distal3.543297.73925K562CSTF2T
chr154034336440343431+intron-Distal5.4539011.62900K562CSTF2T
chr154034542740345527+intron-Distal4.8824919.25952K562FAM120A
chr154034277940342862+intron-Distal3.720203.34442K562FUS
chr154034332240343366+intron-Distal3.779336.26465HepG2CSTF2T
chr154034284740342924+intron-Distal4.152285.97538K562DHX30
chr154034350240343616+intron-Distal4.0983811.02005K562CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SRP14-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SRP14-AS1 is not available on ENCORE database.

  • 40 RBPs can affect the levels of SRP14-AS1.  








The Knockdown/knockout RNA-Seq assay for SRP14-AS1 is not available on ENCORE database.





40 RBPs can affect the gene expression of SRP14-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SRP14-AS1ENSG00000248508.240.4737088.99220-1.136703.053502.24670HepG2CNOT7
SRP14-AS1ENSG00000248508.242.4536012.401401.775303.387102.63460HepG2CPSF6
SRP14-AS1ENSG00000248508.263.8627025.798001.307603.570202.77770HepG2DNAJC21
SRP14-AS1ENSG00000248508.2112.6313070.180600.682402.240901.69050HepG2ETF1
SRP14-AS1ENSG00000248508.213.2002033.51180-1.344102.131201.39920HepG2EWSR1
SRP14-AS1ENSG00000248508.274.2599036.664101.018102.612901.49710HepG2FASTKD2
SRP14-AS1ENSG00000248508.282.9397034.893401.249003.618102.34260HepG2FUS
SRP14-AS1ENSG00000248508.232.1086070.17150-1.127902.729702.04300HepG2FXR1
SRP14-AS1ENSG00000248508.2110.4849065.083400.763402.219901.62090HepG2G3BP1
SRP14-AS1ENSG00000248508.219.3455047.31110-1.290202.346001.41110HepG2GNB2L1
SRP14-AS1ENSG00000248508.253.2711014.052501.922404.157903.38500HepG2GPKOW
SRP14-AS1ENSG00000248508.256.0429026.045201.105402.191001.61080HepG2HNRNPA1
SRP14-AS1ENSG00000248508.275.6217026.453401.515204.942804.01930HepG2HNRNPF
SRP14-AS1ENSG00000248508.251.9467013.411001.953504.275303.50770HepG2HNRNPLL
SRP14-AS1ENSG00000248508.224.5888072.24550-1.554904.268103.48770HepG2NCBP2
SRP14-AS1ENSG00000248508.241.6663011.895501.808402.978902.20330HepG2NSUN2
SRP14-AS1ENSG00000248508.243.1340081.34190-0.915202.136101.37200HepG2PABPC1
SRP14-AS1ENSG00000248508.2106.7895058.073200.878702.884602.27750HepG2PUF60
SRP14-AS1ENSG00000248508.298.7952058.659200.752002.142801.67180HepG2RBM22
SRP14-AS1ENSG00000248508.226.7326058.85580-1.138602.538001.88940HepG2RBM25
SRP14-AS1ENSG00000248508.264.0490028.507301.167702.476801.82510HepG2RPLP0
SRP14-AS1ENSG00000248508.2102.8224014.767502.7996010.636809.11300HepG2SNRNP70
SRP14-AS1ENSG00000248508.2128.3008052.938001.277106.611105.82380HepG2SRSF9
SRP14-AS1ENSG00000248508.266.2177027.958101.243803.325602.78610HepG2TIAL1
SRP14-AS1ENSG00000248508.289.12610137.60220-0.626602.164501.65170K562AGGF1
SRP14-AS1ENSG00000248508.2100.03650151.19150-0.595902.214701.34580K562AKAP8
SRP14-AS1ENSG00000248508.286.25550143.17820-0.731102.730602.08200K562AKAP8L
SRP14-AS1ENSG00000248508.294.95200150.22260-0.661802.677501.78000K562ATP5C1
SRP14-AS1ENSG00000248508.2104.40770154.08920-0.561502.157101.39430K562DKC1
SRP14-AS1ENSG00000248508.255.43610102.12550-0.881402.639201.39170K562EEF2
SRP14-AS1ENSG00000248508.2222.32070141.533800.651402.694801.94710K562GRSF1
SRP14-AS1ENSG00000248508.2129.7305078.898900.717302.249201.70300K562HNRNPC
SRP14-AS1ENSG00000248508.276.35040121.16810-0.666302.270001.46050K562HNRNPU
SRP14-AS1ENSG00000248508.290.38160170.23050-0.913404.155903.00440K562MBNL1
SRP14-AS1ENSG00000248508.2151.2090092.172000.714003.027502.18390K562MTPAP
SRP14-AS1ENSG00000248508.2160.43090102.408600.647502.651401.91800K562NSUN2
SRP14-AS1ENSG00000248508.2168.33640109.333100.622502.068701.34990K562PCBP3
SRP14-AS1ENSG00000248508.227.6828096.01810-1.794306.441205.29740K562PRPF8
SRP14-AS1ENSG00000248508.2349.17120198.042100.818005.721504.55280K562PUF60
SRP14-AS1ENSG00000248508.286.53290142.01540-0.714702.256601.75640K562PUS1
SRP14-AS1ENSG00000248508.274.16560138.35450-0.899503.670903.00160K562RBM15
SRP14-AS1ENSG00000248508.2170.10070108.586300.647402.444001.76760K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SRP14-AS1 is not available on ENCORE database.





4 RBPs can affect the splicing of SRP14-AS1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESRP14-AS1ENSG00000248508.2chr15+4035666140356802403381614033827040357421403579060.341000.000430.01056includedK562SRSF1
SESRP14-AS1ENSG00000248508.2chr15+403566614035680240338161403382704035742140357906-0.282000.001390.02238excludedK562PUS1
SESRP14-AS1ENSG00000248508.2chr15+4035666140356802403381614033827040357421403579060.469000.002780.09922includedHepG2SF3B4
SESRP14-AS1ENSG00000248508.2chr15+403566614035680240338161403382704035742140357906-0.434000.000080.00505excludedK562HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SRP14-AS1 is not avaliable on ENCORE database.