RP11-504P24.4

General Information

Gene Name       : RP11-504P24.4
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-504P24.4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-504P24.4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-504P24.4 RNA is bound by 5 proteins.  







eCLIP assay for RP11-504P24.4 is not avaliable on ENCORE database.





5 proteins are bound to RP11-504P24.4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1224185481224185567+intron-Distal3.8659612.80002K562KHSRP
chr1224196379224196505+intron-Distal4.5053611.15582HepG2HNRNPL
chr1224185485224185558+intron-Distal3.362204.06432HepG2KHSRP
chr1224191776224191860+intron-Distal4.101237.70322HepG2KHSRP
chr1224191748224191848+intron-Distal3.413229.90809K562KHSRP
chr1224196442224196569+intron-Distal3.582357.09229K562HNRNPL
chr1224191481224191557+intron-Distal3.120157.89500K562KHSRP
chr1224186880224186961+intron-Distal3.967263.73313HepG2TAF15
chr1224191439224191551+intron-Distal,intron-Proximal5.3770810.31178HepG2KHSRP
chr1224191207224191262+intron-Proximal3.150834.89219HepG2U2AF1
chr1224191210224191264+intron-Proximal5.184139.06910K562U2AF2
chr1224191212224191262+intron-Proximal4.025774.94700K562U2AF1
chr1224191209224191237+intron-Proximal7.2578432.31015HepG2U2AF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-504P24.4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-504P24.4 is not available on ENCORE database.

  • 37 RBPs can affect the levels of RP11-504P24.4.  








The Knockdown/knockout RNA-Seq assay for RP11-504P24.4 is not available on ENCORE database.





37 RBPs can affect the gene expression of RP11-504P24.4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-504P24.4ENSG00000185495.654.71420173.61730-1.665902.128701.58090HepG2ACO1
RP11-504P24.4ENSG00000185495.6122.528805.598204.4519027.1205024.61940HepG2ADAR
RP11-504P24.4ENSG00000185495.623.85710132.61400-2.474708.816207.92760HepG2AKAP1
RP11-504P24.4ENSG00000185495.618.45130160.58830-3.1216029.2583027.26710HepG2DDX19B
RP11-504P24.4ENSG00000185495.625.08080127.04680-2.3407012.2982011.06930HepG2DDX3X
RP11-504P24.4ENSG00000185495.661.51610109.10620-0.826702.289001.72220HepG2DDX6
RP11-504P24.4ENSG00000185495.63.78630166.11430-5.4552041.7281039.92060HepG2DKC1
RP11-504P24.4ENSG00000185495.6143.013705.636004.6652034.4049032.23250HepG2DNAJC21
RP11-504P24.4ENSG00000185495.654.72430169.68830-1.632602.393001.61740HepG2EWSR1
RP11-504P24.4ENSG00000185495.612.11110116.95430-3.2715017.3253015.75990HepG2FXR1
RP11-504P24.4ENSG00000185495.68.53320108.51490-3.6687018.7626017.10550HepG2G3BP1
RP11-504P24.4ENSG00000185495.6223.00350115.172900.953202.905301.98930HepG2G3BP2
RP11-504P24.4ENSG00000185495.623.285505.690102.032802.228701.64390HepG2HNRNPA1
RP11-504P24.4ENSG00000185495.618.52440110.93900-2.5823011.516309.39060HepG2KHSRP
RP11-504P24.4ENSG00000185495.612.53770158.73120-3.6622031.9918029.14060HepG2KIF1C
RP11-504P24.4ENSG00000185495.618.87310176.84590-3.2281031.3833029.73120HepG2PUS1
RP11-504P24.4ENSG00000185495.613.26430106.86810-3.0102015.0802013.78770HepG2QKI
RP11-504P24.4ENSG00000185495.612.17490109.83360-3.1733016.4554015.34780HepG2NELFE
RP11-504P24.4ENSG00000185495.614.31700102.31400-2.8372013.7059012.49390HepG2RECQL
RP11-504P24.4ENSG00000185495.6179.56830107.244600.743503.367702.85930HepG2SRSF1
RP11-504P24.4ENSG00000185495.6219.2315049.579402.1445011.8430010.29060HepG2UCHL5
RP11-504P24.4ENSG00000185495.6223.5434014.082903.9884047.2924045.17410HepG2UPF1
RP11-504P24.4ENSG00000185495.662.01370135.00960-1.122404.779404.06770K562AGGF1
RP11-504P24.4ENSG00000185495.683.87710140.48510-0.744102.616301.98010K562AKAP8L
RP11-504P24.4ENSG00000185495.626.3322076.63600-1.541204.815203.78020K562EIF3G
RP11-504P24.4ENSG00000185495.625.3875080.79310-1.670105.784804.95660K562FXR1
RP11-504P24.4ENSG00000185495.6105.43450506.43780-2.2640031.9822028.31140K562IGF2BP2
RP11-504P24.4ENSG00000185495.6146.79100532.26200-1.858405.887604.64620K562MAGOH
RP11-504P24.4ENSG00000185495.6100.98200167.01310-0.725902.872001.94120K562MBNL1
RP11-504P24.4ENSG00000185495.660.13910117.06450-0.960902.681401.81450K562NAA15
RP11-504P24.4ENSG00000185495.657.53010473.58420-3.0412053.6419049.74010K562PCBP2
RP11-504P24.4ENSG00000185495.657.65340517.12470-3.1650070.8171067.58900K562PTBP1
RP11-504P24.4ENSG00000185495.643.11060139.31200-1.692207.597706.74370K562PUS1
RP11-504P24.4ENSG00000185495.644.27670135.74740-1.616308.223107.23040K562RBM15
RP11-504P24.4ENSG00000185495.648.32630495.86940-3.3591066.9442062.86150K562RBM22
RP11-504P24.4ENSG00000185495.668.96360521.82120-2.9196056.0832052.00750K562NELFE
RP11-504P24.4ENSG00000185495.6329.7387078.514702.070203.846101.71200K562SLTM
RP11-504P24.4ENSG00000185495.6127.00200506.95280-1.997005.447204.46110K562SRSF1
RP11-504P24.4ENSG00000185495.693.69680513.07310-2.4531042.9796039.60270K562TARDBP
RP11-504P24.4ENSG00000185495.6173.35230494.91600-1.513504.064803.04520K562TIA1
RP11-504P24.4ENSG00000185495.685.76680485.65080-2.5014041.9393037.87210K562TRA2A
RP11-504P24.4ENSG00000185495.675.7622036.778401.042502.918002.18010K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-504P24.4 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-504P24.4 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-504P24.4 is not avaliable on ENCORE database.