NDUFB6

General Information

Gene Name       : NDUFB6
Gene ID             : ENSG00000165264.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NDUFB6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NDUFB6ENSG00000165264.109.2917.8713.58ENCSR000AEF
HepG2NDUFB6ENSG00000165264.1027.9123.3725.64ENCSR985KAT
K562NDUFB6ENSG00000165264.1031.5017.8424.67ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NDUFB6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NDUFB6 RNA is bound by 10 proteins.  







eCLIP assay for NDUFB6 is not avaliable on ENCORE database.





10 proteins are bound to NDUFB6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr93255377132553831-3'-UTR,intron-Distal4.5898618.24449K562PABPC4
chr93255379732553898-3'-UTR,CDS,intron-Distal4.6105719.11994K562PUM2
chr93255379832553870-3'-UTR,intron-Distal5.7231812.66607HepG2LARP4
chr93257303932573133-5'-UTR,CDS,intron-Distal3.267735.32728HepG2DDX3X
chr93257303532573088-5'-UTR,CDS,intron-Distal3.768434.34275K562RPS3
chr93257302032573094-5'-UTR,CDS,intron-Distal3.220645.44144HepG2RPS3
chr93257298232573082-5'-UTR,CDS,intron-Distal4.4242568.35251K562DDX3X
chr93257311032573155-5'-UTR,intron-Distal5.0173321.08310K562DDX3X
chr93257301432573096-5'-UTR,CDS,intron-Distal4.8274812.43794K562GEMIN5
chr93257302132573095-5'-UTR,CDS,intron-Distal4.445256.34856K562DROSHA
chr93257308232573110-5'-UTR,intron-Distal5.0192831.12798K562DDX3X
chr93257284332572972-CDS,intron-Distal4.533784.37348HepG2BCLAF1
chr93257295432572990-CDS,intron-Distal5.440765.25850K562RPS3
chr93257294532573020-CDS,intron-Distal3.347436.65960HepG2RPS3
chr93257293232572982-CDS,intron-Distal4.5537213.31121K562DDX3X
chr93257292532573032-CDS,intron-Distal3.384183.24162HepG2G3BP1
chr93257286632572917-CDS,intron-Distal3.416744.06757K562UCHL5
chr93257293632573014-CDS,intron-Distal3.956264.41402K562DROSHA
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NDUFB6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NDUFB6 is not available on ENCORE database.

  • 53 RBPs can affect the levels of NDUFB6.  








The Knockdown/knockout RNA-Seq assay for NDUFB6 is not available on ENCORE database.





53 RBPs can affect the gene expression of NDUFB6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NDUFB6ENSG00000165264.6962.54280736.948000.385202.063501.59690HepG2AKAP1
NDUFB6ENSG00000165264.689.55890148.98290-0.734202.815902.03770HepG2CALR
NDUFB6ENSG00000165264.6227.34470157.135700.532802.873302.21080HepG2DNAJC2
NDUFB6ENSG00000165264.6336.68410582.89160-0.791806.569805.67960HepG2EIF2S1
NDUFB6ENSG00000165264.6384.46950627.26860-0.706204.324203.47650HepG2EIF4B
NDUFB6ENSG00000165264.6425.12780686.40820-0.691208.647307.68570HepG2ETF1
NDUFB6ENSG00000165264.6494.04610640.28120-0.374102.082301.31740HepG2G3BP2
NDUFB6ENSG00000165264.6479.76320610.86330-0.348501.894001.31030HepG2HNRNPK
NDUFB6ENSG00000165264.6244.14460176.870700.464902.332101.77160HepG2HNRNPU
NDUFB6ENSG00000165264.6407.61100612.81840-0.588304.254803.43390HepG2IGF2BP2
NDUFB6ENSG00000165264.6451.06360616.48680-0.450702.184001.30590HepG2KHSRP
NDUFB6ENSG00000165264.6248.04270328.92560-0.407202.510901.53720HepG2KIF1C
NDUFB6ENSG00000165264.6274.45110595.89580-1.1185012.1952010.70900HepG2PABPC4
NDUFB6ENSG00000165264.6471.48710583.63420-0.307802.147501.60150HepG2PCBP1
NDUFB6ENSG00000165264.6406.50530593.87980-0.546905.312404.60490HepG2PTBP1
NDUFB6ENSG00000165264.6439.64330562.51020-0.355502.320301.70430HepG2PUM2
NDUFB6ENSG00000165264.6420.24720643.16480-0.614005.979005.10940HepG2QKI
NDUFB6ENSG00000165264.6437.44330583.72160-0.416202.784402.10750HepG2RBM25
NDUFB6ENSG00000165264.6476.51580660.92280-0.472004.291803.64460HepG2NELFE
NDUFB6ENSG00000165264.6393.86050615.57510-0.644307.067306.14940HepG2RECQL
NDUFB6ENSG00000165264.6490.15940618.28730-0.335002.411201.85340HepG2SF3B4
NDUFB6ENSG00000165264.6801.15640645.365500.311902.546402.08760HepG2SRSF1
NDUFB6ENSG00000165264.6354.09600525.04570-0.568305.749105.00480HepG2SRSF9
NDUFB6ENSG00000165264.6248.06890580.10040-1.2256019.1000017.81740HepG2TAF15
NDUFB6ENSG00000165264.6334.35810533.01130-0.672806.255705.00410HepG2TIA1
NDUFB6ENSG00000165264.6293.84890194.812700.592903.635102.96460HepG2UTP3
NDUFB6ENSG00000165264.6493.66890387.826400.348001.954601.33750HepG2XRN2
NDUFB6ENSG00000165264.6599.10030403.527200.570005.526604.76750K562AGGF1
NDUFB6ENSG00000165264.6608.03370419.879700.534103.964703.18190K562AKAP8L
NDUFB6ENSG00000165264.6136.36840211.09880-0.630402.885602.08630K562CPSF6
NDUFB6ENSG00000165264.6373.44020464.77140-0.315601.960801.39450K562DDX47
NDUFB6ENSG00000165264.6580.19650451.874900.360502.465701.64480K562DKC1
NDUFB6ENSG00000165264.6401.25360522.94100-0.382102.759101.55400K562EIF2S1
NDUFB6ENSG00000165264.679.75370143.71910-0.849602.448501.50680K562EIF3A
NDUFB6ENSG00000165264.6322.58880447.92140-0.473502.580801.47920K562EIF4B
NDUFB6ENSG00000165264.6328.63430457.36310-0.476903.038801.35490K562FASTKD2
NDUFB6ENSG00000165264.6393.52830274.279800.520703.095002.19480K562FIP1L1
NDUFB6ENSG00000165264.6140.17050214.77840-0.615702.597301.76980K562FMR1
NDUFB6ENSG00000165264.6268.28650370.07220-0.464002.836301.68130K562GLRX3
NDUFB6ENSG00000165264.61057.64150801.633100.399703.397602.56200K562GRSF1
NDUFB6ENSG00000165264.6112.71130238.19270-1.079506.884605.98250K562HNRNPC
NDUFB6ENSG00000165264.6765.59910543.204100.495004.350003.29210K562MAGOH
NDUFB6ENSG00000165264.6304.16010432.27980-0.507104.119603.22890K562NSUN2
NDUFB6ENSG00000165264.6444.46580311.364900.513403.208902.31390K562PPIG
NDUFB6ENSG00000165264.6734.72430350.343601.0683012.9726011.33470K562PRPF8
NDUFB6ENSG00000165264.6663.24290416.467400.671205.489204.75630K562PUS1
NDUFB6ENSG00000165264.6523.11320405.733400.366502.235601.69320K562RBM15
NDUFB6ENSG00000165264.6322.84500426.59800-0.402002.490101.71350K562SF3A3
NDUFB6ENSG00000165264.6322.39710437.06320-0.439003.157002.16250K562SRPK2
NDUFB6ENSG00000165264.6319.19740440.97500-0.466203.340201.91310K562SSB
NDUFB6ENSG00000165264.6117.73020261.69870-1.152405.071402.84860K562TAF15
NDUFB6ENSG00000165264.6181.78950277.96660-0.612602.968901.31950K562TBRG4
NDUFB6ENSG00000165264.6281.88190458.35800-0.701406.751405.68360K562UPF1
NDUFB6ENSG00000165264.6272.21460392.19830-0.526803.373702.41060K562WDR3
NDUFB6ENSG00000165264.6274.06740407.86940-0.573604.869603.77560K562WDR43
NDUFB6ENSG00000165264.6894.525301273.12670-0.509205.383804.11340K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NDUFB6 is not available on ENCORE database.





8 RBPs can affect the splicing of NDUFB6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENDUFB6ENSG00000165264.6chr9-3255890732558952325529963255394232570957325710500.064000.001330.09285includedHepG2G3BP1
SENDUFB6ENSG00000165264.6chr9-325589073255895232552996325539423257095732571050-0.054000.006850.09396excludedK562SF3B4
SENDUFB6ENSG00000165264.6chr9-3255890732558952325529963255394232570957325710500.053000.000370.02844includedHepG2AKAP1
SENDUFB6ENSG00000165264.6chr9-325589073255895232552996325539423257095732571157-0.119000.000000.00000excludedK562AQR
SENDUFB6ENSG00000165264.6chr9-325709573257105032558907325589523257287832573160-0.084000.000530.01339excludedK562U2AF1
SENDUFB6ENSG00000165264.6chr9-325589073255895232552996325539423257095732571050-0.143000.001930.05116excludedHepG2SF3A3
SENDUFB6ENSG00000165264.6chr9-325589073255895232552996325539423257095732571050-0.121000.000000.00000excludedHepG2SF3B4
SENDUFB6ENSG00000165264.6chr9-3255890732558952325529963255394232570957325710500.051000.002150.06033includedK562UTP18
SENDUFB6ENSG00000165264.6chr9-3255890732558952325529963255394232570957325710500.052000.001450.03600includedK562RBM15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NDUFB6 is not avaliable on ENCORE database.