ITGAE

General Information

Gene Name : ITGAE
Gene ID : ENSG00000083457.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ITGAE)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ITGAE	ENSG00000083457.11	12.14	13.19	12.66	ENCSR000AEF
HepG2	ITGAE	ENSG00000083457.11	26.50	27.80	27.15	ENCSR985KAT
K562	ITGAE	ENSG00000083457.11	13.16	12.99	13.07	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ITGAE is not avaliable on ENCORE database.

Proteins bound to RNA

ITGAE RNA is bound by 5 proteins.

eCLIP assay for ITGAE is not avaliable on ENCORE database.

5 proteins are bound to ITGAE RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	3617935	3618023	-	3'-UTR,intron-Distal,intron-Proximal	3.19589	3.64832	HepG2	ZC3H11A
chr17	3626992	3627120	-	CDS,intron-Distal,intron-Proximal	3.71663	3.59926	K562	DDX3X
chr17	3623654	3623735	-	CDS,intron-Distal,intron-Proximal	4.02915	8.55689	HepG2	U2AF2
chr17	3626570	3626669	-	CDS,intron-Distal,intron-Proximal	3.99856	3.56019	HepG2	GRWD1
chr17	3626922	3627032	-	CDS,intron-Distal,intron-Proximal	5.74805	25.05263	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for ITGAE is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ITGAE is not available on ENCORE database.
39 RBPs can affect the levels of ITGAE.

The Knockdown/knockout RNA-Seq assay for ITGAE is not available on ENCORE database.

39 RBPs can affect the gene expression of ITGAE :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ITGAE	ENSG00000083457.7	211.97770	317.02240	-0.58070	2.45490	1.95080	HepG2	AKAP1
ITGAE	ENSG00000083457.7	245.53470	166.19070	0.56300	2.16100	1.33680	HepG2	BCCIP
ITGAE	ENSG00000083457.7	107.42320	165.99400	-0.62780	2.81540	2.14560	HepG2	CKAP4
ITGAE	ENSG00000083457.7	185.54350	102.66910	0.85370	4.22400	2.92530	HepG2	CSTF2
ITGAE	ENSG00000083457.7	40.49450	81.78630	-1.01410	2.33530	1.43870	HepG2	DDX59
ITGAE	ENSG00000083457.7	89.30050	137.30620	-0.62070	2.23150	1.59420	HepG2	DNAJC21
ITGAE	ENSG00000083457.7	111.39040	250.79910	-1.17090	7.29230	6.36350	HepG2	EIF2S1
ITGAE	ENSG00000083457.7	363.05530	281.31640	0.36790	2.22260	1.67400	HepG2	ETF1
ITGAE	ENSG00000083457.7	91.64620	142.22830	-0.63410	2.08630	1.39610	HepG2	FUBP3
ITGAE	ENSG00000083457.7	181.40450	262.58750	-0.53360	2.23160	1.59960	HepG2	HNRNPK
ITGAE	ENSG00000083457.7	148.66310	263.69300	-0.82680	4.36020	3.53000	HepG2	IGF2BP2
ITGAE	ENSG00000083457.7	107.76100	156.46410	-0.53800	2.24200	1.57340	HepG2	ILF2
ITGAE	ENSG00000083457.7	184.84770	255.43040	-0.46660	2.22100	1.53720	HepG2	NOL12
ITGAE	ENSG00000083457.7	154.45000	256.44260	-0.73150	3.67470	2.85010	HepG2	PABPC4
ITGAE	ENSG00000083457.7	150.81590	246.07790	-0.70630	4.33170	3.60180	HepG2	PCBP1
ITGAE	ENSG00000083457.7	162.03940	250.40550	-0.62790	3.43020	2.83470	HepG2	PTBP1
ITGAE	ENSG00000083457.7	106.53750	169.10760	-0.66660	3.11300	2.46770	HepG2	PUS1
ITGAE	ENSG00000083457.7	391.28470	235.13090	0.73470	5.98500	5.29530	HepG2	RBM22
ITGAE	ENSG00000083457.7	145.32230	246.11360	-0.76010	4.18610	3.37210	HepG2	RBM25
ITGAE	ENSG00000083457.7	478.55190	221.37970	1.11210	16.63190	15.48260	HepG2	SRSF9
ITGAE	ENSG00000083457.7	260.08250	162.66520	0.67700	2.95310	2.25770	HepG2	SUPV3L1
ITGAE	ENSG00000083457.7	453.26400	244.60340	0.88980	9.71040	8.76260	HepG2	TAF15
ITGAE	ENSG00000083457.7	144.06940	88.11050	0.70930	2.31560	1.73570	HepG2	U2AF1
ITGAE	ENSG00000083457.7	155.96650	252.14850	-0.69300	2.58920	1.77950	HepG2	UBE2L3
ITGAE	ENSG00000083457.7	142.91720	97.26350	0.55510	1.99070	1.38180	HepG2	UPF1
ITGAE	ENSG00000083457.7	290.43660	148.97310	0.96310	4.80900	3.46870	HepG2	UPF2
ITGAE	ENSG00000083457.7	158.17970	93.90410	0.75220	1.92360	1.40560	HepG2	UTP3
ITGAE	ENSG00000083457.7	255.97660	160.12580	0.67670	3.08740	2.32200	HepG2	XRN2
ITGAE	ENSG00000083457.7	158.99610	106.97120	0.57170	2.38250	1.86400	HepG2	ZNF622
ITGAE	ENSG00000083457.7	174.08950	112.50000	0.62980	2.63310	1.68160	K562	AKAP8
ITGAE	ENSG00000083457.7	359.31930	243.61990	0.56050	3.03010	2.42150	K562	AQR
ITGAE	ENSG00000083457.7	354.05480	207.67900	0.76950	3.09420	2.29790	K562	GRSF1
ITGAE	ENSG00000083457.7	120.20440	62.96110	0.93290	3.20700	2.20010	K562	HNRNPM
ITGAE	ENSG00000083457.7	169.10650	103.76020	0.70460	2.78690	1.98920	K562	HSPD1
ITGAE	ENSG00000083457.7	192.75720	118.26450	0.70470	3.52750	2.57300	K562	MAGOH
ITGAE	ENSG00000083457.7	129.36510	83.36340	0.63390	2.12250	1.40880	K562	MTPAP
ITGAE	ENSG00000083457.7	147.14950	88.77200	0.72900	2.22440	1.45410	K562	NAA15
ITGAE	ENSG00000083457.7	149.04150	92.75470	0.68410	2.22380	1.54730	K562	PRPF8
ITGAE	ENSG00000083457.7	185.58900	114.89380	0.69170	3.39590	2.66890	K562	PTBP1
ITGAE	ENSG00000083457.7	175.77670	105.64660	0.73440	2.94380	2.38690	K562	PUS1
ITGAE	ENSG00000083457.7	162.95280	110.22420	0.56390	2.14230	1.40710	K562	RBM22
ITGAE	ENSG00000083457.7	184.81350	112.62300	0.71450	3.14020	2.39070	K562	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ITGAE is not available on ENCORE database.

20 RBPs can affect the splicing of ITGAE :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.19000	0.00000	0.00016	excluded	HepG2	G3BP1
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.20600	0.00000	0.00000	excluded	K562	SF3B4
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.10200	0.00205	0.06331	excluded	K562	PRPF8
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.07900	0.00118	0.06807	excluded	HepG2	RBM22
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	0.18600	0.00003	0.02081	included	HepG2	DHX30
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.28600	0.00019	0.00345	excluded	HepG2	U2AF2
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.20900	0.00000	0.00000	excluded	HepG2	AKAP1
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623452	3623696	3626981	3627038	0.08200	0.00234	0.02502	included	K562	AQR
SE	ITGAE	ENSG00000083457.7	chr17	-	3623600	3623696			3619981	3620092	3626981	3627131	-0.06500	0.00655	0.05805	excluded	K562	AQR
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627148	-0.19200	0.00000	0.00004	excluded	HepG2	DDX3X
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.20000	0.00000	0.00005	excluded	HepG2	NCBP2
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.19200	0.00000	0.00015	excluded	HepG2	MATR3
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.20400	0.00000	0.00005	excluded	K562	U2AF1
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.16300	0.00000	0.00000	excluded	HepG2	SRSF1
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	0.15600	0.00008	0.01472	included	HepG2	SSB
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.21100	0.00001	0.00190	excluded	HepG2	IGF2BP3
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	0.16400	0.00002	0.00269	included	HepG2	TIAL1
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627148	-0.10700	0.00244	0.08998	excluded	HepG2	SF3B4
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.19700	0.00001	0.00047	excluded	K562	U2AF2
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.21700	0.00000	0.00016	excluded	K562	QKI
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627148	0.40300	0.00001	0.00097	included	HepG2	SRSF9
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	-0.15400	0.00001	0.00460	excluded	K562	SERBP1
SE	ITGAE	ENSG00000083457.7	chr17	-	3626581	3626677			3623600	3623696	3626981	3627038	0.16400	0.00106	0.02028	included	K562	HNRNPC
MXE	ITGAE	ENSG00000083457.7	chr17	-	3623600	3623696	3626981	3627038	3619981	3620092	3631212	3631320	0.41800	0.00001	0.00065	1included	HepG2	SRSF9

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ITGAE

General Information

Functions

Localization

Domains (AlphaFold: ITGAE)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ITGAE is not avaliable on ENCORE database.

5 proteins are bound to ITGAE RNA:

eCLIP assay for ITGAE is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ITGAE is not available on ENCORE database.

39 RBPs can affect the gene expression of ITGAE :

The Knockdown/knockout RNA-Seq assay for ITGAE is not available on ENCORE database.

20 RBPs can affect the splicing of ITGAE :

The Knockdown/knockout RNA-Seq assay for ITGAE is not avaliable on ENCORE database.