HNF1B

General Information

Gene Name       : HNF1B
Gene ID             : ENSG00000275410.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HNF1B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HNF1BENSG00000275410.41.001.491.25ENCSR000AEF
HepG2HNF1BENSG00000275410.45.604.475.04ENCSR985KAT
K562HNF1BENSG00000275410.40.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HNF1B is not avaliable on ENCORE database.



Proteins bound to RNA
  • HNF1B RNA is bound by 1 proteins.  







eCLIP assay for HNF1B is not avaliable on ENCORE database.





1 proteins are bound to HNF1B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr173609169636091822-CDS,intron-Distal,intron-Proximal3.517934.13746HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HNF1B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HNF1B is not available on ENCORE database.

  • 51 RBPs can affect the levels of HNF1B.  








The Knockdown/knockout RNA-Seq assay for HNF1B is not available on ENCORE database.





51 RBPs can affect the gene expression of HNF1B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HNF1BENSG00000108753.8172.72470383.30050-1.150008.438707.56510HepG2AKAP1
HNF1BENSG00000108753.8221.88270335.18840-0.595203.139402.50630HepG2BOP1
HNF1BENSG00000108753.8174.91570448.52320-1.3585016.5190014.91630HepG2CALR
HNF1BENSG00000108753.8423.63270301.298800.491502.557601.81130HepG2CIRBP
HNF1BENSG00000108753.8240.90830330.89110-0.457902.969302.28500HepG2CKAP4
HNF1BENSG00000108753.8167.21580327.65590-0.970502.037401.38690HepG2CNOT7
HNF1BENSG00000108753.8394.58200306.124000.366102.525401.72590HepG2DDX19B
HNF1BENSG00000108753.8162.30530367.12310-1.177609.685908.57770HepG2DDX3X
HNF1BENSG00000108753.8648.16770349.429400.891302.909601.90700HepG2DDX59
HNF1BENSG00000108753.8434.74450315.483600.462502.108401.56270HepG2DDX6
HNF1BENSG00000108753.8197.45550316.68780-0.681504.800203.95260HepG2DKC1
HNF1BENSG00000108753.8177.52280273.57220-0.623902.661001.77330HepG2EIF3D
HNF1BENSG00000108753.8349.67420523.03990-0.580903.594201.58110HepG2EIF3H
HNF1BENSG00000108753.8134.16150326.25490-1.282008.349907.18660HepG2EIF4B
HNF1BENSG00000108753.8280.60450390.47860-0.476702.285501.51200HepG2EIF4G1
HNF1BENSG00000108753.8443.49620314.485800.495802.507701.75780HepG2FUBP3
HNF1BENSG00000108753.8228.79200313.59270-0.454901.982401.41550HepG2G3BP1
HNF1BENSG00000108753.8225.60580360.97070-0.678103.229401.52250HepG2GTF2F1
HNF1BENSG00000108753.8208.90590290.51240-0.475702.017801.41540HepG2HNRNPC
HNF1BENSG00000108753.8364.80330241.562000.594604.238303.37180HepG2HNRNPF
HNF1BENSG00000108753.8205.38190389.88370-0.924703.882402.77540HepG2HNRNPM
HNF1BENSG00000108753.8304.25540459.74330-0.595503.265701.92550HepG2HSPD1
HNF1BENSG00000108753.8218.52650318.72820-0.544502.740502.06760HepG2IGF2BP2
HNF1BENSG00000108753.8289.67120459.39400-0.665303.570002.14460HepG2KRR1
HNF1BENSG00000108753.8167.94840338.26730-1.010107.243706.19740HepG2MAGOH
HNF1BENSG00000108753.8248.52020340.13280-0.452701.864601.34140HepG2MATR3
HNF1BENSG00000108753.8282.96940435.67040-0.622603.270901.70650HepG2NKRF
HNF1BENSG00000108753.8590.74250295.157501.000905.285004.26470HepG2NSUN2
HNF1BENSG00000108753.8156.52200285.64170-0.867806.217205.02610HepG2PARN
HNF1BENSG00000108753.8211.34660362.54300-0.778504.248302.97780HepG2PCBP2
HNF1BENSG00000108753.8295.22590446.53150-0.596903.440001.47050HepG2PPIG
HNF1BENSG00000108753.896.78290152.53700-0.656302.251701.52010HepG2PRPF8
HNF1BENSG00000108753.8220.01710397.68180-0.854005.269604.50490HepG2PUM1
HNF1BENSG00000108753.8158.08220349.83330-1.146006.135205.11240HepG2RAVER1
HNF1BENSG00000108753.8145.27960345.96900-1.2518012.7665011.81650HepG2RBM22
HNF1BENSG00000108753.8183.31380298.49120-0.703403.977202.77370HepG2RBM27
HNF1BENSG00000108753.889.35070150.88520-0.755902.643501.87300HepG2RRP9
HNF1BENSG00000108753.8230.25680329.43060-0.516702.592001.90780HepG2SF3B1
HNF1BENSG00000108753.8535.76470359.252500.576502.712402.01620HepG2SLBP
HNF1BENSG00000108753.8241.48990356.85370-0.563402.676201.73620HepG2SMNDC1
HNF1BENSG00000108753.8192.13310367.64980-0.936203.019802.53090HepG2SRSF1
HNF1BENSG00000108753.8179.76600369.89890-1.041007.925306.93800HepG2SRSF5
HNF1BENSG00000108753.8330.41650237.336300.477302.771902.07560HepG2SRSF7
HNF1BENSG00000108753.8194.35940420.63700-1.113809.582708.54360HepG2SUCLG1
HNF1BENSG00000108753.8130.55530196.89850-0.592802.170201.56100HepG2SUPV3L1
HNF1BENSG00000108753.8361.68170482.59420-0.416103.172602.43500HepG2UPF1
HNF1BENSG00000108753.8257.01720465.92570-0.858209.361108.36630HepG2UTP3
HNF1BENSG00000108753.8189.47720384.75250-1.021906.981005.36310HepG2XRCC6
HNF1BENSG00000108753.8239.76070347.68770-0.536203.798603.03360HepG2ZC3H8
HNF1BENSG00000108753.8423.78930530.76120-0.324702.495701.96820HepG2ZNF622
HNF1BENSG00000108753.8227.09950349.56510-0.622203.135001.74910HepG2ZRANB2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HNF1B is not available on ENCORE database.






No RBPs affect the alternative splcing events of HNF1B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HNF1B is not avaliable on ENCORE database.