GAD1

General Information

Gene Name       : GAD1
Gene ID             : ENSG00000128683.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GAD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GAD1ENSG00000128683.130.030.150.09ENCSR000AEF
HepG2GAD1ENSG00000128683.130.120.080.10ENCSR985KAT
K562GAD1ENSG00000128683.1310.846.618.72ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GAD1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GAD1 RNA is bound by 2 proteins.  







eCLIP assay for GAD1 is not avaliable on ENCORE database.





2 proteins are bound to GAD1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2171675029171675100+5'-UTR,intron-Proximal4.792564.86944K562AQR
chr2171676364171676368+intron-Distal8.7184979.51811K562LSM11
chr2171676378171676389+intron-Distal8.7184979.51811K562LSM11
chr2171676368171676374+intron-Distal8.7184979.51811K562LSM11
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GAD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GAD1 is not available on ENCORE database.

  • 43 RBPs can affect the levels of GAD1.  








The Knockdown/knockout RNA-Seq assay for GAD1 is not available on ENCORE database.





43 RBPs can affect the gene expression of GAD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GAD1ENSG00000128683.930.639802.417103.664002.923102.37800HepG2AKAP1
GAD1ENSG00000128683.910.456900.873503.581501.966001.49080HepG2PTBP1
GAD1ENSG00000128683.942.442804.715403.170006.112405.12820HepG2PUM2
GAD1ENSG00000128683.976.292703.152204.5970016.8906015.83130HepG2RBM22
GAD1ENSG00000128683.931.002303.559703.122405.151204.52690HepG2SRFBP1
GAD1ENSG00000128683.911.640900.950303.614502.045201.62150HepG2SRSF1
GAD1ENSG00000128683.921.838506.091501.841902.149801.69820HepG2TIAL1
GAD1ENSG00000128683.9312.86450221.654700.497102.782502.21300K562AGGF1
GAD1ENSG00000128683.9604.42940230.639201.3898020.5095018.39240K562AKAP8L
GAD1ENSG00000128683.9171.86740287.33870-0.741504.079403.39420K562AQR
GAD1ENSG00000128683.9386.13900241.991200.674105.408004.08050K562ATP5C1
GAD1ENSG00000128683.9204.40820103.401100.983105.955504.52840K562BCLAF1
GAD1ENSG00000128683.9392.51560264.898000.567203.893102.46430K562CCDC124
GAD1ENSG00000128683.9339.63640240.421100.498302.693301.43380K562CIRBP
GAD1ENSG00000128683.9251.97850166.734500.595603.168001.97820K562CPEB4
GAD1ENSG00000128683.9195.82930112.728800.796603.819402.89850K562CPSF6
GAD1ENSG00000128683.9165.32810100.681100.715402.642001.75300K562EFTUD2
GAD1ENSG00000128683.9320.63690164.686700.961108.520707.36160K562EIF2S2
GAD1ENSG00000128683.958.69610107.78780-0.876902.656201.64300K562EIF3D
GAD1ENSG00000128683.981.69050151.69560-0.892902.883402.07270K562EIF3G
GAD1ENSG00000128683.9125.25000204.07910-0.704303.431302.52170K562EIF4A3
GAD1ENSG00000128683.9113.39640183.78310-0.696603.502602.17740K562EIF4B
GAD1ENSG00000128683.9210.9537089.635501.234707.313804.69370K562FAM120A
GAD1ENSG00000128683.9118.78020212.23340-0.837404.835504.06570K562FXR1
GAD1ENSG00000128683.9140.26950214.46960-0.612602.814701.36870K562G3BP1
GAD1ENSG00000128683.9180.02310100.940700.834603.510701.87670K562GEMIN5
GAD1ENSG00000128683.9301.15930148.530701.019704.983902.32920K562HLTF
GAD1ENSG00000128683.9313.18730228.195200.456702.397801.31070K562IGF2BP3
GAD1ENSG00000128683.9360.18460234.302500.620303.192002.01320K562MAK16
GAD1ENSG00000128683.9123.29450235.27060-0.932206.273904.80180K562MATR3
GAD1ENSG00000128683.9373.36020274.208500.445202.251101.44510K562MBNL1
GAD1ENSG00000128683.9304.64000192.199500.664402.907201.99900K562NAA15
GAD1ENSG00000128683.9156.1487089.188700.807902.837601.39470K562NUSAP1
GAD1ENSG00000128683.9294.84650164.994700.837405.357303.06350K562PKM
GAD1ENSG00000128683.9191.4679081.142101.238506.618705.12090K562PSIP1
GAD1ENSG00000128683.9168.03450229.05540-0.446901.995701.41500K562PTBP1
GAD1ENSG00000128683.9483.78400303.433600.672904.465903.43450K562PUF60
GAD1ENSG00000128683.9379.82210228.749300.731504.626603.94770K562PUS1
GAD1ENSG00000128683.9348.78450184.308400.920103.338501.61400K562RBM39
GAD1ENSG00000128683.9207.06200143.888000.525002.359501.60070K562SF3A3
GAD1ENSG00000128683.9113.62650224.55610-0.982805.999304.96740K562SRSF1
GAD1ENSG00000128683.9190.52070100.390200.924204.389203.07730K562UCHL5
GAD1ENSG00000128683.9248.70880159.800600.638103.671801.74230K562UPF2
GAD1ENSG00000128683.9524.67950340.482400.623805.171703.40710K562WRN
GAD1ENSG00000128683.9226.71140323.67740-0.513702.810401.93890K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GAD1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of GAD1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GAD1 is not avaliable on ENCORE database.