DYX1C1-CCPG1

General Information

Gene Name : DYX1C1-CCPG1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DYX1C1-CCPG1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DYX1C1-CCPG1 is not avaliable on ENCORE database.

Proteins bound to RNA

DYX1C1-CCPG1 RNA is bound by 16 proteins.

eCLIP assay for DYX1C1-CCPG1 is not avaliable on ENCORE database.

16 proteins are bound to DYX1C1-CCPG1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	55664311	55664362	-	intron-Distal,intron-Proximal	4.25180	3.45805	K562	KHSRP
chr15	55665616	55665678	-	intron-Distal	3.75180	6.18396	K562	KHSRP
chr15	55700415	55700440	-	5'-UTR,intron-Distal	4.80143	4.03170	HepG2	DDX3X
chr15	55652426	55652497	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.98818	5.28221	K562	SND1
chr15	55651602	55651659	-	3'-UTR,intron-Distal,intron-Proximal	3.79122	4.86893	HepG2	SUB1
chr15	55652210	55652264	-	3'-UTR,CDS,intron-Distal	3.78000	3.61371	K562	SND1
chr15	55700342	55700432	-	5'-UTR,intron-Distal,intron-Proximal	4.62363	4.09264	K562	AQR
chr15	55669318	55669350	-	CDS,intron-Distal,intron-Proximal	3.15233	3.07653	K562	ZNF622
chr15	55657198	55657348	-	intron-Distal,intron-Proximal	4.40891	8.66247	K562	EFTUD2
chr15	55666016	55666078	-	intron-Distal	3.21491	3.07751	K562	KHSRP
chr15	55700439	55700503	-	5'-UTR,intron-Distal,intron-Proximal	4.53395	5.47892	K562	DDX3X
chr15	55648328	55648435	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.57742	5.83959	K562	KHSRP
chr15	55652532	55652636	-	3'-UTR,CDS,intron-Distal	3.96330	6.40330	K562	UCHL5
chr15	55665678	55665720	-	intron-Distal	3.40657	4.74253	K562	KHSRP
chr15	55671347	55671407	-	intron-Distal	3.17815	3.81590	K562	HNRNPL
chr15	55700440	55700511	-	5'-UTR,intron-Distal,intron-Proximal	3.89775	6.30673	HepG2	DDX3X
chr15	55681563	55681635	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	5.70347	7.49422	HepG2	DDX3X
chr15	55677837	55677897	-	CDS,intron-Distal	3.97119	7.22925	K562	DDX3X
chr15	55677797	55677868	-	CDS,intron-Distal,intron-Proximal	4.42810	5.01312	K562	UCHL5
chr15	55665147	55665203	-	intron-Distal,intron-Proximal	4.88366	5.83868	K562	DGCR8
chr15	55700418	55700439	-	5'-UTR,intron-Distal	3.52949	4.08283	K562	DDX3X
chr15	55663466	55663530	-	intron-Distal	5.24678	5.62258	K562	KHSRP
chr15	55652796	55652884	-	3'-UTR,CDS,intron-Distal	4.49134	4.34038	HepG2	BCLAF1
chr15	55664064	55664225	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.14916	4.84084	K562	ZNF800
chr15	55665796	55665878	-	intron-Distal	4.68772	6.35380	K562	U2AF2
chr15	55663988	55664044	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.03366	3.24816	K562	YBX3
chr15	55652321	55652418	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.35068	6.50691	K562	SND1
chr15	55652629	55652677	-	3'-UTR,CDS,intron-Distal	3.02875	3.50543	K562	SND1
chr15	55681562	55681632	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.20593	3.09975	K562	FTO
chr15	55664098	55664209	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.11055	6.21592	K562	PUM1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for DYX1C1-CCPG1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DYX1C1-CCPG1 is not available on ENCORE database.
14 RBPs can affect the levels of DYX1C1-CCPG1.

The Knockdown/knockout RNA-Seq assay for DYX1C1-CCPG1 is not available on ENCORE database.

14 RBPs can affect the gene expression of DYX1C1-CCPG1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DYX1C1-CCPG1	ENSG00000261771.1	13.34930	0.00000	99999.99990	3.76340	2.13150	HepG2	HLTF
DYX1C1-CCPG1	ENSG00000261771.1	4.00890	19.58320	-2.28830	2.42460	1.76400	HepG2	UPF1
DYX1C1-CCPG1	ENSG00000261771.1	0.00000	18.90650	-99999.99999	5.35020	4.56260	HepG2	UTP3
DYX1C1-CCPG1	ENSG00000261771.1	26.61330	0.00000	99999.99990	8.26000	6.52610	HepG2	XRCC6
DYX1C1-CCPG1	ENSG00000261771.1	65.62280	8.09530	3.01890	10.29890	9.14030	HepG2	ZC3H8
DYX1C1-CCPG1	ENSG00000261771.1	1.93430	21.53750	-3.47690	4.48970	3.83680	HepG2	ZNF622
DYX1C1-CCPG1	ENSG00000261771.1	7.54640	0.00000	99999.99990	2.00300	1.32740	K562	CPSF6
DYX1C1-CCPG1	ENSG00000261771.1	0.00000	15.58220	-99999.99999	4.30440	1.96080	K562	DAZAP1
DYX1C1-CCPG1	ENSG00000261771.1	14.53590	0.00000	99999.99990	4.21520	3.06650	K562	FTO
DYX1C1-CCPG1	ENSG00000261771.1	0.00000	13.48120	-99999.99999	3.76530	1.48840	K562	HLTF
DYX1C1-CCPG1	ENSG00000261771.1	10.85610	1.17350	3.20950	2.17380	1.35280	K562	HNRNPM
DYX1C1-CCPG1	ENSG00000261771.1	8.79100	0.00000	99999.99990	2.94500	1.70700	K562	IGF2BP3
DYX1C1-CCPG1	ENSG00000261771.1	0.00000	15.13230	-99999.99999	4.13560	1.88170	K562	PRPF6
DYX1C1-CCPG1	ENSG00000261771.1	0.00000	14.74850	-99999.99999	4.02730	1.61210	K562	SMNDC1
DYX1C1-CCPG1	ENSG00000261771.1	12.96830	1.94080	2.74010	2.07510	1.36350	K562	SYNCRIP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DYX1C1-CCPG1 is not available on ENCORE database.

18 RBPs can affect the splicing of DYX1C1-CCPG1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142			55647445	55648607	55657385	55657507	-0.21300	0.00036	0.01345	excluded	HepG2	SF3A3
SE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142			55647445	55648607	55657385	55657507	0.13600	0.00084	0.07887	included	K562	CPSF6
SE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142			55647445	55648607	55657385	55657507	-0.35700	0.00052	0.09351	excluded	K562	SAFB
SE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142			55647445	55648607	55657385	55657507	-0.12900	0.00162	0.05826	excluded	K562	PTBP1
SE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142			55647445	55648607	55657385	55657507	-0.28400	0.00051	0.01085	excluded	K562	HNRNPC
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142	55663990	55664242	55647445	55648607	55669146	55669348	-0.05900	0.00020	0.02426	2included	K562	LARP4
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142	55657385	55657507	55647445	55648607	55663990	55664242	0.13300	0.00012	0.00625	1included	K562	RBM15
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142	55657385	55657507	55647445	55648607	55663990	55664242	-0.15200	0.00088	0.01661	2included	K562	DROSHA
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142	55657385	55657507	55647445	55648607	55663990	55664242	0.13300	0.00016	0.00481	1included	K562	PUS1
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142	55657385	55657507	55647445	55648607	55663990	55664242	0.12300	0.00053	0.02360	1included	K562	AGGF1
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142	55657385	55657507	55647445	55648607	55663990	55664242	-0.21700	0.00018	0.01230	2included	HepG2	XPO5
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142	55657385	55657507	55647445	55648607	55663990	55664242	-0.10200	0.00605	0.09856	2included	K562	TARDBP
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142	55657385	55657507	55647445	55648607	55663990	55664242	-0.17700	0.00019	0.01332	2included	K562	TAF15
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142	55657385	55657507	55647445	55648607	55663990	55664242	-0.13300	0.00121	0.04691	2included	K562	HNRNPU
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142	55657385	55657507	55647445	55648607	55663990	55664242	0.27400	0.00027	0.05403	1included	K562	HNRNPM
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55657385	55657507	55663990	55664242	55651736	55653142	55669146	55669348	0.10000	0.00279	0.09897	1included	K562	TIA1
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142	55657385	55657507	55647445	55648607	55663990	55664242	0.07600	0.00132	0.06620	1included	K562	HNRNPK
MXE	DYX1C1-CCPG1	ENSG00000261771.1	chr15	-	55651736	55653142	55657385	55657507	55647445	55648607	55663990	55664242	0.11900	0.00087	0.03697	1included	K562	AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DYX1C1-CCPG1

General Information

Functions

Localization

Domains (AlphaFold: DYX1C1-CCPG1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DYX1C1-CCPG1 is not avaliable on ENCORE database.

16 proteins are bound to DYX1C1-CCPG1 RNA:

eCLIP assay for DYX1C1-CCPG1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DYX1C1-CCPG1 is not available on ENCORE database.

14 RBPs can affect the gene expression of DYX1C1-CCPG1 :

The Knockdown/knockout RNA-Seq assay for DYX1C1-CCPG1 is not available on ENCORE database.

18 RBPs can affect the splicing of DYX1C1-CCPG1 :

The Knockdown/knockout RNA-Seq assay for DYX1C1-CCPG1 is not avaliable on ENCORE database.