ACTR8

General Information

Gene Name       : ACTR8
Gene ID             : ENSG00000113812.13
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ACTR8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ACTR8ENSG00000113812.1318.6516.9417.80ENCSR000AEF
HepG2ACTR8ENSG00000113812.1322.0225.5223.77ENCSR985KAT
K562ACTR8ENSG00000113812.1310.089.259.66ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ACTR8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ACTR8 RNA is bound by 8 proteins.  







eCLIP assay for ACTR8 is not avaliable on ENCORE database.





8 proteins are bound to ACTR8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr35391241753912533-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.624755.68078HepG2AQR
chr35391120253911264-5'-UTR,CDS,intron-Distal,intron-Proximal5.230264.02817HepG2PRPF8
chr35391061753910671-CDS,intron-Distal,intron-Proximal4.541813.56873HepG2PRPF8
chr35391007253910100-CDS,intron-Distal3.258693.46851HepG2U2AF1
chr35391007353910132-CDS,intron-Distal,intron-Proximal4.309434.49756K562BUD13
chr35390997253910028-CDS,intron-Distal,intron-Proximal4.073673.79199HepG2PPIG
chr35391007053910158-CDS,intron-Distal,intron-Proximal3.606984.77481HepG2BUD13
chr35390641753906518-CDS,intron-Distal3.305334.45064HepG2GRWD1
chr35391006653910126-CDS,intron-Distal,intron-Proximal3.726288.36543HepG2U2AF2
chr35391010053910122-CDS,intron-Distal,intron-Proximal4.167923.88027HepG2U2AF1
chr35390997553910016-CDS,intron-Distal4.165303.45943HepG2BCLAF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ACTR8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ACTR8 is not available on ENCORE database.

  • 25 RBPs can affect the levels of ACTR8.  








The Knockdown/knockout RNA-Seq assay for ACTR8 is not available on ENCORE database.





25 RBPs can affect the gene expression of ACTR8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ACTR8ENSG00000113812.91060.23460700.688200.597404.468703.81430HepG2AKAP1
ACTR8ENSG00000113812.9390.74380504.79730-0.369502.247101.54830HepG2AKAP8L
ACTR8ENSG00000113812.9218.15940389.69530-0.837006.042905.06180HepG2CPSF6
ACTR8ENSG00000113812.9547.17640421.432900.376602.311401.48430HepG2DDX24
ACTR8ENSG00000113812.9387.18530280.767600.463502.164601.35570HepG2EIF3D
ACTR8ENSG00000113812.9901.64530596.398100.596203.676702.88960HepG2EIF4B
ACTR8ENSG00000113812.9447.55890591.60120-0.402503.137702.37770HepG2HNRNPF
ACTR8ENSG00000113812.9833.72040669.167400.317103.089902.47180HepG2PUM1
ACTR8ENSG00000113812.9734.83110456.469200.686803.495002.70500HepG2RAVER1
ACTR8ENSG00000113812.9982.08260792.296700.309702.806302.28540HepG2RBM22
ACTR8ENSG00000113812.9306.40280400.65250-0.386902.544301.92230HepG2SAFB2
ACTR8ENSG00000113812.9492.32400894.87930-0.8621015.8345014.89460HepG2SRFBP1
ACTR8ENSG00000113812.9793.03190595.085600.414204.168603.61720HepG2SRSF1
ACTR8ENSG00000113812.9348.30900441.05540-0.340602.180601.66810HepG2TRIM56
ACTR8ENSG00000113812.9675.21320412.820000.709706.403305.46550HepG2U2AF1
ACTR8ENSG00000113812.9635.84480482.205500.398903.465002.80840HepG2UTP3
ACTR8ENSG00000113812.9351.03260496.19590-0.499302.586901.88510HepG2XRN2
ACTR8ENSG00000113812.9676.28440549.306600.299902.609502.07440HepG2ZNF622
ACTR8ENSG00000113812.9201.02510284.30690-0.500102.388101.78110K562AKAP8L
ACTR8ENSG00000113812.9373.14960494.93600-0.407502.081901.55860K562AQR
ACTR8ENSG00000113812.9234.92450326.53130-0.475002.603401.47100K562CCDC124
ACTR8ENSG00000113812.9708.26370377.669100.9071013.4255012.10060K562DDX47
ACTR8ENSG00000113812.9212.86260132.235700.686702.258101.36020K562EIF3A
ACTR8ENSG00000113812.9403.03550273.964200.556804.301003.31960K562EIF3G
ACTR8ENSG00000113812.9333.02890245.782300.438202.377701.80900K562FXR1
ACTR8ENSG00000113812.9528.27610272.869700.953008.099006.68510K562RPS19
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ACTR8 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ACTR8 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ACTR8 is not avaliable on ENCORE database.