AC007277.3

General Information

Gene Name       : AC007277.3
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AC007277.3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AC007277.3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AC007277.3 RNA is bound by 3 proteins.  







eCLIP assay for AC007277.3 is not avaliable on ENCORE database.





3 proteins are bound to AC007277.3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2171517585171517703-intron-Distal4.427725.04227HepG2HNRNPL
chr2171500230171500296-intron-Distal4.359824.34038HepG2BCLAF1
chr2171500235171500449-intron-Distal3.365244.71371HepG2GRWD1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AC007277.3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AC007277.3 is not available on ENCORE database.

  • 52 RBPs can affect the levels of AC007277.3.  








The Knockdown/knockout RNA-Seq assay for AC007277.3 is not available on ENCORE database.





52 RBPs can affect the gene expression of AC007277.3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AC007277.3ENSG00000213981.411.4540053.56310-2.225403.350002.77260HepG2AKAP1
AC007277.3ENSG00000213981.493.5011044.325901.076703.213002.36640HepG2ASCC1
AC007277.3ENSG00000213981.44.8347044.32430-3.196606.923206.02420HepG2BOP1
AC007277.3ENSG00000213981.426.0220061.37430-1.237902.806302.02920HepG2CALR
AC007277.3ENSG00000213981.4151.9506070.872001.100203.110802.07340HepG2CCAR1
AC007277.3ENSG00000213981.462.2153033.743200.882602.050801.46600HepG2CKAP4
AC007277.3ENSG00000213981.482.2404040.693401.015002.800202.10960HepG2CPSF6
AC007277.3ENSG00000213981.477.6045021.128301.876907.243805.62240HepG2CSTF2
AC007277.3ENSG00000213981.411.5574060.22380-2.381507.405406.44940HepG2CELF1
AC007277.3ENSG00000213981.433.1155064.77660-0.968002.487401.77870HepG2DAZAP1
AC007277.3ENSG00000213981.473.5133031.213201.235804.241303.23420HepG2DDX19B
AC007277.3ENSG00000213981.48.6240051.32420-2.573203.855103.12770HepG2DDX3X
AC007277.3ENSG00000213981.468.6069032.288301.087202.741802.06730HepG2DKC1
AC007277.3ENSG00000213981.4126.6084042.560801.572705.623004.11710HepG2ESF1
AC007277.3ENSG00000213981.45.1331049.62590-3.273207.434806.23820HepG2FIP1L1
AC007277.3ENSG00000213981.490.3850036.433801.310704.496803.50960HepG2FUBP3
AC007277.3ENSG00000213981.4103.6074046.502001.155703.860202.79780HepG2G3BP2
AC007277.3ENSG00000213981.413.6573042.87700-1.650503.156802.06610HepG2GNB2L1
AC007277.3ENSG00000213981.4102.4568046.132801.151103.584302.86490HepG2GPKOW
AC007277.3ENSG00000213981.492.0261034.506501.415102.621401.99020HepG2HNRNPA1
AC007277.3ENSG00000213981.4325.7554038.382103.0852037.0805034.89020HepG2HNRNPC
AC007277.3ENSG00000213981.490.1810044.325001.024602.800402.09800HepG2HNRNPK
AC007277.3ENSG00000213981.418.4624059.01300-1.676404.743903.87840HepG2HNRNPL
AC007277.3ENSG00000213981.463.9944030.851501.052502.456701.49510HepG2KIF1C
AC007277.3ENSG00000213981.414.8945046.37860-1.638703.377901.78990HepG2NKRF
AC007277.3ENSG00000213981.4117.3399039.034001.587806.472305.35280HepG2NSUN2
AC007277.3ENSG00000213981.468.5514037.282700.878602.227401.72610HepG2PTBP1
AC007277.3ENSG00000213981.419.4743061.30840-1.654504.454103.71840HepG2PUF60
AC007277.3ENSG00000213981.432.9824065.07470-0.980402.674402.08910HepG2PUM1
AC007277.3ENSG00000213981.496.5554034.374801.489906.265205.40540HepG2PUS1
AC007277.3ENSG00000213981.49.5354060.40710-2.663306.158005.13230HepG2RAVER1
AC007277.3ENSG00000213981.413.1236036.64020-1.481302.364201.73530HepG2RBM25
AC007277.3ENSG00000213981.4129.8399041.488001.645908.045007.20840HepG2NELFE
AC007277.3ENSG00000213981.496.5674038.647801.321004.821004.03700HepG2RECQL
AC007277.3ENSG00000213981.415.6774044.45220-1.503602.930302.10800HepG2RPS3A
AC007277.3ENSG00000213981.414.1221036.64220-1.375502.155201.32140HepG2SERBP1
AC007277.3ENSG00000213981.46.5352048.18120-2.882204.649602.70030HepG2SFPQ
AC007277.3ENSG00000213981.4397.1967048.487603.0341032.4571029.83670HepG2SNRNP70
AC007277.3ENSG00000213981.420.0359077.51940-1.952002.097701.64250HepG2SRFBP1
AC007277.3ENSG00000213981.4106.5036040.510001.394505.398704.79360HepG2SRSF1
AC007277.3ENSG00000213981.457.3025032.960200.797801.789901.32880HepG2SRSF9
AC007277.3ENSG00000213981.4146.7714036.422002.0106013.1283012.04290HepG2TAF15
AC007277.3ENSG00000213981.471.2489037.048600.943402.447601.97210HepG2TIAL1
AC007277.3ENSG00000213981.4140.9420059.884401.234705.542504.25360HepG2TUFM
AC007277.3ENSG00000213981.46.2792042.43790-2.756705.776404.88600HepG2U2AF1
AC007277.3ENSG00000213981.413.3277051.71990-1.956302.882301.87340HepG2U2AF2
AC007277.3ENSG00000213981.426.0605063.37930-1.282102.395501.62030HepG2UBE2L3
AC007277.3ENSG00000213981.4116.8541058.133301.007204.149303.32110HepG2UPF1
AC007277.3ENSG00000213981.413.5520056.12580-2.050205.255304.47440HepG2UTP3
AC007277.3ENSG00000213981.4116.8486032.928701.827107.907006.69250HepG2XRN2
AC007277.3ENSG00000213981.437.8130066.82980-0.821601.969001.38710HepG2ZC3H8
AC007277.3ENSG00000213981.415.0275063.93580-2.089007.080306.31050HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AC007277.3 is not available on ENCORE database.





1 RBPs can affect the splicing of AC007277.3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEAC007277.3ENSG00000213981.4chr2-1714951321714952501714948781714950021714953881714955540.139000.001610.05615includedHepG2HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for AC007277.3 is not avaliable on ENCORE database.