AC007277.3

General Information

Gene Name : AC007277.3
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: AC007277.3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for AC007277.3 is not avaliable on ENCORE database.

Proteins bound to RNA

AC007277.3 RNA is bound by 3 proteins.

CanvasJS.com

eCLIP assay for AC007277.3 is not avaliable on ENCORE database.

3 proteins are bound to AC007277.3 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	171517585	171517703	-	intron-Distal	4.42772	5.04227	HepG2	HNRNPL
chr2	171500235	171500449	-	intron-Distal	3.36524	4.71371	HepG2	GRWD1
chr2	171500230	171500296	-	intron-Distal	4.35982	4.34038	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 3 of 3 entries

eCLIP assay for AC007277.3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for AC007277.3 is not available on ENCORE database.
52 RBPs can affect the levels of AC007277.3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for AC007277.3 is not available on ENCORE database.

52 RBPs can affect the gene expression of AC007277.3 :

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Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
AC007277.3	ENSG00000213981.4	325.75540	38.38210	3.08520	37.08050	34.89020	HepG2	HNRNPC
AC007277.3	ENSG00000213981.4	397.19670	48.48760	3.03410	32.45710	29.83670	HepG2	SNRNP70
AC007277.3	ENSG00000213981.4	146.77140	36.42200	2.01060	13.12830	12.04290	HepG2	TAF15
AC007277.3	ENSG00000213981.4	129.83990	41.48800	1.64590	8.04500	7.20840	HepG2	NELFE
AC007277.3	ENSG00000213981.4	116.84860	32.92870	1.82710	7.90700	6.69250	HepG2	XRN2
AC007277.3	ENSG00000213981.4	11.55740	60.22380	-2.38150	7.40540	6.44940	HepG2	CELF1
AC007277.3	ENSG00000213981.4	15.02750	63.93580	-2.08900	7.08030	6.31050	HepG2	ZNF622
AC007277.3	ENSG00000213981.4	5.13310	49.62590	-3.27320	7.43480	6.23820	HepG2	FIP1L1
AC007277.3	ENSG00000213981.4	4.83470	44.32430	-3.19660	6.92320	6.02420	HepG2	BOP1
AC007277.3	ENSG00000213981.4	77.60450	21.12830	1.87690	7.24380	5.62240	HepG2	CSTF2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 52 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for AC007277.3 is not available on ENCORE database.

1 RBPs can affect the splicing of AC007277.3 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	AC007277.3	ENSG00000213981.4	chr2	-	171495132	171495250			171494878	171495002	171495388	171495554	0.13900	0.00161	0.05615	included	HepG2	HNRNPC

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

AC007277.3

General Information

Functions

Localization

Domains (AlphaFold: AC007277.3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for AC007277.3 is not avaliable on ENCORE database.

3 proteins are bound to AC007277.3 RNA:

eCLIP assay for AC007277.3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for AC007277.3 is not available on ENCORE database.

52 RBPs can affect the gene expression of AC007277.3 :

The Knockdown/knockout RNA-Seq assay for AC007277.3 is not available on ENCORE database.

1 RBPs can affect the splicing of AC007277.3 :

The Knockdown/knockout RNA-Seq assay for AC007277.3 is not avaliable on ENCORE database.