RPL7

General Information

Gene Name : RPL7
Gene ID : ENSG00000147604.13
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RPL7)

Not Available

Antibody Validation

Bethyl Labs: A300-741A

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RPL7	ENSG00000147604.13	2393.96	2342.40	2368.18	ENCSR000AEF
HepG2	RPL7	ENSG00000147604.13	1387.33	1843.52	1615.42	ENCSR985KAT
K562	RPL7	ENSG00000147604.13	2033.80	1767.81	1900.80	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
RPL7		A300-741A	3					BGKcLV46-65, Submitted, ENCORE2

KD RNA-Seq

GeneName	Cell_Line	Method	Sample_reps	Control_reps	KD%	Status	Project
RPL7	K562	CRISPR	BGKcLV30-55,BGKcLV30-56	BGKcLV30-1,BGKcLV30-2	0.0,0.0	NotSatisfied	ENCODE4
RPL7	K562	CRISPR	BGKcLV35-45,BGKcLV35-46	BGKcLV35-1,BGKcLV35-2	8.9,0.0	NotSatisfied	ENCORE2
RPL7	K562	CRISPR	RPL7-BGKcLV46-65,RPL7-BGKcLV46-66	NT-BGKcLV46-1,NT-BGKcLV46-2	52.6,54.6065	Submitting	ENCORE2
RPL7	K562	CRISPR	BGKcLV46-67,BGHcLV32-53	BGKcLV46-1,BGKcLV46-2	54.6065,0.0	NotSatisfied	ENCORE2
RPL7	HepG2	CRISPR	BGHcLV32-53,BGHcLV32-54	BGHcLV32-1,BGHcLV32-2	0.0,0.0	NotSatisfied	ENCODE4
RPL7	HepG2	CRISPR	BGHcLV47-55,BGHcLV47-56	BGHcLV47-1,BGHcLV47-2	0.0,0.0	NotSatisfied	ENCORE2
RPL7	HepG2	CRISPR	BGHcLV49-89,BGHcLV49-90	BGHcLV49-1,BGHcLV49-2	1.4,25.8	NotSatisfied	ENCORE2
RPL7	HepG2	CRISPR	BGHcLV49-91,BGHcLV49-92	BGHcLV49-1,BGHcLV49-2	0.0,0.0	NotSatisfied	ENCORE2
RPL7	HepG2	CRISPR	BGHcLV49-93,BGHcLV49-94	BGHcLV49-1,BGHcLV49-2	0.0,0.0	NotSatisfied	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela
RPL7	Product_ID: A300-741A Lot_ID: 3 Source: Bethyl Labs Target Name: RPL7-human

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RPL7 is not avaliable on ENCORE database.

Proteins bound to RNA

RPL7 RNA is bound by 10 proteins.

CanvasJS.com

eCLIP assay for RPL7 is not avaliable on ENCORE database.

10 proteins are bound to RPL7 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	74205833	74205864	-	5'-UTR,CDS,intron-Distal	3.05957	24.90060	K562	PABPC4
chr8	74205016	74205032	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.05049	23.19509	K562	PABPC4
chr8	74203236	74203272	-	3'-UTR,intron-Distal,intron-Proximal	6.83676	22.44866	K562	AQR
chr8	74203272	74203278	-	3'-UTR,intron-Distal,intron-Proximal	6.67673	20.80778	K562	AQR
chr8	74203718	74203787	-	intron-Distal,intron-Proximal	5.91923	19.08640	K562	AQR
chr8	74205010	74205033	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.31126	16.75575	HepG2	TRA2A
chr8	74205832	74205864	-	5'-UTR,CDS,intron-Distal	3.21661	16.23869	HepG2	TRA2A
chr8	74204872	74204927	-	CDS,intron-Distal,intron-Proximal	5.30679	15.88168	K562	AQR
chr8	74203100	74203200	-	3'-UTR,intron-Distal,intron-Proximal	4.30764	15.31230	K562	KHSRP
chr8	74203743	74203803	-	CDS,intron-Distal,intron-Proximal	6.10424	15.26945	K562	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 39 entries

eCLIP assay for RPL7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RPL7 is not available on ENCORE database.
143 RBPs can affect the levels of RPL7.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RPL7 is not available on ENCORE database.

143 RBPs can affect the gene expression of RPL7 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RPL7	ENSG00000147604.9	2401.39220	11376.83770	-2.24420	166.17560	163.38880	HepG2	TIAL1
RPL7	ENSG00000147604.9	11979.62310	34087.07600	-1.50860	142.36410	139.97820	HepG2	PTBP1
RPL7	ENSG00000147604.9	15147.77110	37934.85490	-1.32440	119.07600	116.93120	HepG2	NELFE
RPL7	ENSG00000147604.9	16167.83070	37041.79980	-1.19600	117.28380	115.32860	HepG2	SRSF1
RPL7	ENSG00000147604.9	14049.38020	26240.43640	-0.90130	74.18480	71.82940	HepG2	SUCLG1
RPL7	ENSG00000147604.9	15329.37950	36915.12400	-1.26790	71.90430	69.56650	HepG2	QKI
RPL7	ENSG00000147604.9	19061.92640	35487.34540	-0.89660	57.70120	55.69110	HepG2	SF3B4
RPL7	ENSG00000147604.9	4021.95590	10272.31170	-1.35280	54.43410	52.37200	HepG2	RPS19
RPL7	ENSG00000147604.9	10598.28120	32879.48100	-1.63340	42.53040	40.10690	HepG2	EIF4A3
RPL7	ENSG00000147604.9	20962.86370	35332.59110	-0.75320	41.55040	39.73210	HepG2	RECQL
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 177 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RPL7 is not available on ENCORE database.

1 RBPs can affect the splicing of RPL7 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
A3SS	RPL7	ENSG00000147604.9	chr8	-	74204923	74205025			74204923	74205022	74205833	74205868	-0.06000	0.00000	0.00042	shorter	K562	SF3B4

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RPL7

General Information

Functions

Localization

Domains (AlphaFold: RPL7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RPL7 is not avaliable on ENCORE database.

10 proteins are bound to RPL7 RNA:

eCLIP assay for RPL7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RPL7 is not available on ENCORE database.

143 RBPs can affect the gene expression of RPL7 :

The Knockdown/knockout RNA-Seq assay for RPL7 is not available on ENCORE database.

1 RBPs can affect the splicing of RPL7 :

The Knockdown/knockout RNA-Seq assay for RPL7 is not avaliable on ENCORE database.