CFB

General Information

Gene Name : CFB
Gene ID : ENSG00000243649.8
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CFB)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CFB	ENSG00000243649.8	0.00	0.01	0.01	ENCSR000AEF
HepG2	CFB	ENSG00000243649.8	196.43	229.28	212.86	ENCSR985KAT
K562	CFB	ENSG00000243649.8	0.12	0.00	0.06	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CFB is not avaliable on ENCORE database.

Proteins bound to RNA

CFB RNA is bound by 33 proteins.

CanvasJS.com

eCLIP assay for CFB is not avaliable on ENCORE database.

33 proteins are bound to CFB RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	31915062	31915111	+	intron-Proximal	7.24920	81.42444	HepG2	SF3B4
chr6	31915198	31915254	+	3'-UTR,CDS	4.20913	81.37785	HepG2	SND1
chr6	31916655	31916735	+	CDS	3.92754	72.70615	HepG2	SND1
chr6	31916127	31916181	+	CDS,intron-Proximal	4.52905	62.33685	HepG2	U2AF2
chr6	31913293	31913356	+	3'-UTR,intron-Distal	4.45839	57.33569	HepG2	PCBP2
chr6	31913065	31913116	+	3'-UTR,CDS,intron-Distal	4.86267	56.49052	HepG2	SND1
chr6	31901484	31901559	+	5'-UTR,CDS,intron-Distal	3.93392	55.21621	HepG2	SND1
chr6	31913184	31913235	+	3'-UTR,intron-Distal,intron-Proximal	3.90262	54.03991	HepG2	LARP4
chr6	31915254	31915298	+	3'-UTR,CDS	3.87136	49.47746	HepG2	SND1
chr6	31913121	31913184	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.78307	47.09983	HepG2	LARP4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 228 entries

eCLIP assay for CFB is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CFB is not available on ENCORE database.
137 RBPs can affect the levels of CFB.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CFB is not available on ENCORE database.

137 RBPs can affect the gene expression of CFB :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CFB	ENSG00000243649.4	2053.24000	10694.94370	-2.38100	207.58220	204.62030	HepG2	RBM22
CFB	ENSG00000243649.4	5104.20050	12079.66690	-1.24280	109.35810	107.35550	HepG2	SRFBP1
CFB	ENSG00000243649.4	24311.06810	10488.22310	1.21270	105.31450	103.38200	HepG2	SSB
CFB	ENSG00000243649.4	12729.26660	6116.76790	1.05720	93.59860	90.92360	HepG2	ZC3H8
CFB	ENSG00000243649.4	9110.67450	18433.28210	-1.01670	79.51530	77.77710	HepG2	SRSF1
CFB	ENSG00000243649.4	16345.06660	4806.26960	1.76580	78.81970	76.37120	HepG2	SRSF7
CFB	ENSG00000243649.4	12892.68870	3006.32690	2.10040	72.21420	69.53860	HepG2	GPKOW
CFB	ENSG00000244255.1	312.22620	5.20100	5.90760	59.96910	56.58980	HepG2	RPS3A
CFB	ENSG00000243649.4	6236.77760	10945.22410	-0.81140	55.94990	53.87960	HepG2	CKAP4
CFB	ENSG00000243649.4	11402.50820	4891.80690	1.22080	54.95530	52.59090	HepG2	HNRNPF
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 155 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CFB is not available on ENCORE database.

44 RBPs can affect the splicing of CFB :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	CFB	ENSG00000243649.4	chr6	+	31903699	31903838	31901643	31901742	31905095	31905236	-0.24700	0.00000	excluded	HepG2	U2AF1
SE	CFB	ENSG00000244255.1	chr6	+	31912756	31912806	31912503	31912630	31912954	31912963	-0.30000	0.00000	excluded	HepG2	U2AF1
SE	CFB	ENSG00000243649.4	chr6	+	31918644	31918721	31918062	31918180	31918920	31919021	-0.16500	0.00000	excluded	HepG2	PRPF8
SE	CFB	ENSG00000243649.4	chr6	+	31912756	31912806	31912503	31912630	31912954	31912963	-0.13600	0.00000	excluded	HepG2	PRPF8
SE	CFB	ENSG00000243649.4	chr6	+	31917826	31917924	31917235	31917334	31918395	31918549	-0.10000	0.00000	excluded	HepG2	U2AF2
SE	CFB	ENSG00000243649.4	chr6	+	31903699	31903838	31901643	31901742	31905095	31905236	-0.10700	0.00000	excluded	HepG2	U2AF2
SE	CFB	ENSG00000244255.1	chr6	+	31912756	31912806	31912503	31912630	31912954	31912963	-0.38700	0.00000	excluded	HepG2	U2AF2
SE	CFB	ENSG00000243649.4	chr6	+	31903699	31903838	31901643	31901742	31905095	31905236	-0.12400	0.00000	excluded	HepG2	SRSF7
SE	CFB	ENSG00000243649.4	chr6	+	31895731	31895941	31895474	31895575	31901386	31901560	0.08800	0.00000	included	HepG2	PTBP1
SE	CFB	ENSG00000243649.4	chr6	+	31903699	31903838	31901643	31901742	31905095	31905236	-0.06800	0.00001	excluded	HepG2	SRSF1

Showing 1 to 10 of 113 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CFB

General Information

Functions

Localization

Domains (AlphaFold: CFB)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CFB is not avaliable on ENCORE database.

33 proteins are bound to CFB RNA:

eCLIP assay for CFB is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CFB is not available on ENCORE database.

137 RBPs can affect the gene expression of CFB :

The Knockdown/knockout RNA-Seq assay for CFB is not available on ENCORE database.

44 RBPs can affect the splicing of CFB :

The Knockdown/knockout RNA-Seq assay for CFB is not avaliable on ENCORE database.