CD59

General Information

Gene Name : CD59
Gene ID : ENSG00000085063.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CD59)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CD59	ENSG00000085063.15	117.47	126.12	121.80	ENCSR000AEF
HepG2	CD59	ENSG00000085063.15	132.71	152.98	142.84	ENCSR985KAT
K562	CD59	ENSG00000085063.15	166.34	146.47	156.41	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CD59 is not avaliable on ENCORE database.

Proteins bound to RNA

CD59 RNA is bound by 18 proteins.

CanvasJS.com

eCLIP assay for CD59 is not avaliable on ENCORE database.

18 proteins are bound to CD59 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	33730810	33730871	-	3'-UTR,intron-Distal	5.34124	79.34218	K562	PUM2
chr11	33730782	33730810	-	3'-UTR,intron-Distal	5.33645	49.09243	K562	PUM2
chr11	33743940	33743992	-	CDS,intron-Distal	3.76512	26.58943	K562	DDX3X
chr11	33729918	33730001	-	intron-Distal	3.95924	25.67660	K562	UPF1
chr11	33730778	33730862	-	3'-UTR,intron-Distal	4.10311	24.39206	K562	UPF1
chr11	33729925	33730004	-	intron-Distal	4.63474	23.80978	K562	FAM120A
chr11	33743923	33743987	-	CDS,intron-Distal,intron-Proximal	4.62014	22.66486	HepG2	DDX3X
chr11	33738949	33739004	-	CDS,intron-Distal	3.97381	22.55250	K562	DDX3X
chr11	33739004	33739019	-	CDS,intron-Distal,intron-Proximal	3.85489	20.41304	K562	DDX3X
chr11	33731517	33731672	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	4.32911	20.06754	HepG2	LARP4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 76 entries

eCLIP assay for CD59 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CD59 is not available on ENCORE database.
105 RBPs can affect the levels of CD59.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CD59 is not available on ENCORE database.

105 RBPs can affect the gene expression of CD59 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CD59	ENSG00000085063.10	575.61470	2015.30940	-1.80780	104.05890	101.22120	HepG2	SAFB2
CD59	ENSG00000085063.10	4864.48150	2113.30410	1.20270	78.85560	76.77440	HepG2	ACO1
CD59	ENSG00000085063.10	3450.83170	1602.00690	1.10700	70.28770	68.50410	HepG2	ZNF622
CD59	ENSG00000085063.10	6273.10040	3134.30340	1.00090	43.32980	41.75200	HepG2	RBM22
CD59	ENSG00000085063.10	6007.36400	3540.07590	0.76290	37.03120	35.74790	HepG2	SRFBP1
CD59	ENSG00000085063.10	6050.59850	2881.24160	1.07030	30.23300	28.58170	HepG2	CELF1
CD59	ENSG00000085063.10	2545.59590	1601.00600	0.66890	22.33530	20.75830	HepG2	ZC3H8
CD59	ENSG00000085063.10	533.95500	1217.59450	-1.18920	19.70450	17.94450	HepG2	NSUN2
CD59	ENSG00000085063.10	5323.28940	3266.15910	0.70460	18.19080	16.72000	HepG2	AUH
CD59	ENSG00000085063.10	1571.04730	2311.56760	-0.55710	17.35150	15.69650	HepG2	ILF2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 120 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CD59 is not available on ENCORE database.

21 RBPs can affect the splicing of CD59 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	CD59	ENSG00000085063.10	chr11	-	33752969	33753014	33743924	33744009	33757927	33757991	-0.07900	0.00003	excluded	K562	AKAP8L
SE	CD59	ENSG00000085063.10	chr11	-	33752969	33753014	33743924	33744009	33757927	33757991	-0.09700	0.00004	excluded	K562	AQR
SE	CD59	ENSG00000085063.10	chr11	-	33752969	33753014	33743924	33744009	33757927	33757991	-0.07600	0.00001	excluded	K562	PUS1
SE	CD59	ENSG00000085063.10	chr11	-	33732929	33733051	33730378	33731889	33738915	33739017	0.06000	0.00080	included	HepG2	FTO
SE	CD59	ENSG00000085063.10	chr11	-	33752969	33753014	33743924	33744009	33757927	33757991	-0.10800	0.00006	excluded	K562	EFTUD2
SE	CD59	ENSG00000085063.10	chr11	-	33752969	33753014	33743924	33744009	33757927	33757991	-0.08600	0.00001	excluded	K562	U2AF1
SE	CD59	ENSG00000085063.10	chr11	-	33752969	33753014	33743924	33744009	33757927	33757991	-0.11600	0.00009	excluded	K562	HNRNPL
SE	CD59	ENSG00000085063.10	chr11	-	33752969	33753014	33743924	33744009	33757927	33757991	-0.11800	0.00000	excluded	HepG2	SF3A3
SE	CD59	ENSG00000085063.10	chr11	-	33752969	33753014	33743924	33744009	33757927	33757991	-0.08700	0.00001	excluded	K562	U2AF2
SE	CD59	ENSG00000085063.10	chr11	-	33752969	33753014	33743924	33744009	33757927	33757991	-0.07900	0.00009	excluded	K562	RBM15

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CD59

General Information

Functions

Localization

Domains (AlphaFold: CD59)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CD59 is not avaliable on ENCORE database.

18 proteins are bound to CD59 RNA:

eCLIP assay for CD59 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CD59 is not available on ENCORE database.

105 RBPs can affect the gene expression of CD59 :

The Knockdown/knockout RNA-Seq assay for CD59 is not available on ENCORE database.

21 RBPs can affect the splicing of CD59 :

The Knockdown/knockout RNA-Seq assay for CD59 is not avaliable on ENCORE database.