TMPO

General Information

Gene Name : TMPO
Gene ID : ENSG00000120802.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TMPO)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TMPO	ENSG00000120802.13	143.32	135.79	139.56	ENCSR000AEF
HepG2	TMPO	ENSG00000120802.13	43.56	80.61	62.09	ENCSR985KAT
K562	TMPO	ENSG00000120802.13	129.38	123.92	126.65	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TMPO is not avaliable on ENCORE database.

Proteins bound to RNA

TMPO RNA is bound by 43 proteins.

CanvasJS.com

eCLIP assay for TMPO is not avaliable on ENCORE database.

43 proteins are bound to TMPO RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	98943117	98943213	+	3'-UTR	4.20940	69.47645	K562	AKAP1
chr12	98909384	98909455	+	5'-UTR	3.97714	27.75427	K562	DDX3X
chr12	98909455	98909508	+	5'-UTR	3.27594	23.68941	K562	DDX3X
chr12	98943629	98943648	+	3'-UTR	6.58010	22.46708	K562	LIN28B
chr12	98909485	98909618	+	5'-UTR,intron-Proximal	3.78354	22.04902	K562	GEMIN5
chr12	98941757	98941781	+	3'-UTR	6.41842	22.04411	K562	IGF2BP1
chr12	98941781	98941823	+	3'-UTR	6.40688	21.60343	K562	IGF2BP1
chr12	98928618	98928730	+	3'-UTR,intron-Distal	4.69677	21.30458	K562	IGF2BP1
chr12	98929350	98929418	+	3'-UTR,intron-Distal,polyA_signal	4.75060	20.99464	K562	KHSRP
chr12	98943216	98943257	+	3'-UTR	3.78690	20.16727	K562	AKAP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 122 entries

eCLIP assay for TMPO is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TMPO is not available on ENCORE database.
151 RBPs can affect the levels of TMPO.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TMPO is not available on ENCORE database.

151 RBPs can affect the gene expression of TMPO :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TMPO	ENSG00000120802.9	988.65850	3540.40350	-1.84040	117.98490	115.94360	HepG2	SRFBP1
TMPO	ENSG00000120802.9	1032.73680	2559.64240	-1.30950	79.95340	78.07960	HepG2	ZNF622
TMPO	ENSG00000120802.9	976.36970	3465.00370	-1.82740	63.07950	60.51660	HepG2	TARDBP
TMPO	ENSG00000120802.9	1095.65650	3579.54120	-1.70800	58.80580	56.77400	HepG2	BOP1
TMPO	ENSG00000120802.9	723.55180	2392.46150	-1.72530	53.53910	51.48890	HepG2	RPLP0
TMPO	ENSG00000120802.9	1460.38680	3278.23830	-1.16660	50.18870	48.15380	HepG2	CELF1
TMPO	ENSG00000120802.9	1081.43340	2256.44020	-1.06110	49.01940	47.03720	HepG2	CKAP4
TMPO	ENSG00000120802.9	1176.04410	3555.03190	-1.59590	44.77250	42.73570	HepG2	HNRNPLL
TMPO	ENSG00000120802.9	1158.80210	3725.20700	-1.68470	42.54630	40.41240	HepG2	GPKOW
TMPO	ENSG00000120802.9	1171.88440	2327.34940	-0.98990	38.64830	36.67450	HepG2	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 183 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TMPO is not available on ENCORE database.

29 RBPs can affect the splicing of TMPO :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	TMPO	ENSG00000120802.9	chr12	+	98938728	98938839	98931252	98931350	98940136	98940225	0.12200	0.00008	included	K562	SRSF1
SE	TMPO	ENSG00000120802.9	chr12	+	98938007	98938127	98931252	98931350	98938219	98938315	-0.17200	0.00000	excluded	K562	SRSF1
SE	TMPO	ENSG00000120802.9	chr12	+	98926600	98926696	98925457	98925616	98931252	98931350	0.16000	0.00000	included	K562	PRPF8
SE	TMPO	ENSG00000120802.9	chr12	+	98938728	98938839	98931252	98931350	98940136	98940225	-0.37000	0.00000	excluded	HepG2	U2AF1
SE	TMPO	ENSG00000120802.9	chr12	+	98926600	98926696	98925457	98925616	98931252	98931350	0.14500	0.00000	included	K562	AQR
SE	TMPO	ENSG00000120802.9	chr12	+	98926600	98926696	98925457	98925616	98931252	98931352	0.22200	0.00000	included	K562	PUS1
SE	TMPO	ENSG00000120802.9	chr12	+	98938728	98938839	98931252	98931350	98940136	98940225	-0.25900	0.00000	excluded	K562	PUS1
SE	TMPO	ENSG00000120802.9	chr12	+	98926600	98926696	98925457	98925616	98931252	98931352	0.10600	0.00000	included	HepG2	SFPQ
SE	TMPO	ENSG00000120802.9	chr12	+	98926600	98926696	98925457	98925616	98931252	98931350	0.11900	0.00004	included	K562	EFTUD2
SE	TMPO	ENSG00000120802.9	chr12	+	98938728	98938839	98931252	98931350	98940136	98940225	-0.22200	0.00001	excluded	K562	EFTUD2

Showing 1 to 10 of 50 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TMPO

General Information

Functions

Localization

Domains (AlphaFold: TMPO)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TMPO is not avaliable on ENCORE database.

43 proteins are bound to TMPO RNA:

eCLIP assay for TMPO is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TMPO is not available on ENCORE database.

151 RBPs can affect the gene expression of TMPO :

The Knockdown/knockout RNA-Seq assay for TMPO is not available on ENCORE database.

29 RBPs can affect the splicing of TMPO :

The Knockdown/knockout RNA-Seq assay for TMPO is not avaliable on ENCORE database.