TIMM17A

General Information

Gene Name : TIMM17A
Gene ID : ENSG00000134375.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TIMM17A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TIMM17A	ENSG00000134375.10	52.50	48.70	50.60	ENCSR000AEF
HepG2	TIMM17A	ENSG00000134375.10	43.85	61.62	52.73	ENCSR985KAT
K562	TIMM17A	ENSG00000134375.10	111.33	97.95	104.64	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TIMM17A is not avaliable on ENCORE database.

Proteins bound to RNA

TIMM17A RNA is bound by 17 proteins.

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eCLIP assay for TIMM17A is not avaliable on ENCORE database.

17 proteins are bound to TIMM17A RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	201924680	201924725	+	intron-Proximal	4.76298	19.25239	K562	AQR
chr1	201938743	201938811	+	3'-UTR	4.17278	14.39260	HepG2	SUB1
chr1	201932561	201932702	+	intron-Distal,intron-Proximal	3.00736	12.36947	K562	KHSRP
chr1	201924710	201924809	+	intron-Distal,intron-Proximal	3.73895	10.03905	K562	TIA1
chr1	201934605	201934665	+	CDS	3.80768	9.36842	K562	LIN28B
chr1	201926372	201926454	+	CDS,intron-Proximal	3.54316	9.30654	K562	AQR
chr1	201924681	201924769	+	intron-Proximal	4.28811	7.44508	K562	PRPF8
chr1	201938982	201939032	+	3'-UTR	3.09802	7.24994	K562	YBX3
chr1	201932777	201932869	+	CDS	4.23324	7.23394	K562	RPS3
chr1	201939105	201939176	+	3'-UTR	4.23670	6.99270	K562	IGF2BP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 30 entries

eCLIP assay for TIMM17A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TIMM17A is not available on ENCORE database.
109 RBPs can affect the levels of TIMM17A.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TIMM17A is not available on ENCORE database.

109 RBPs can affect the gene expression of TIMM17A :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TIMM17A	ENSG00000134375.6	267.05750	1294.75140	-2.27750	50.44850	47.79830	HepG2	EIF4A3
TIMM17A	ENSG00000134375.6	331.58600	881.76230	-1.41100	42.21180	40.73510	HepG2	ZNF622
TIMM17A	ENSG00000134375.6	504.91920	2332.53380	-2.20780	38.81530	36.65590	K562	HNRNPC
TIMM17A	ENSG00000134375.6	193.01970	734.40610	-1.92780	35.98230	33.81610	HepG2	HNRNPC
TIMM17A	ENSG00000134375.6	181.10190	768.65410	-2.08550	35.13130	33.15480	HepG2	GPKOW
TIMM17A	ENSG00000134375.6	554.67910	2085.62250	-1.91080	24.46130	21.92790	K562	GPKOW
TIMM17A	ENSG00000134375.6	434.22700	803.15500	-0.88720	18.04420	15.73520	HepG2	KIF1C
TIMM17A	ENSG00000134375.6	1998.47470	1256.90280	0.66890	16.45720	15.50930	HepG2	SRSF1
TIMM17A	ENSG00000134375.6	1276.71540	2414.74730	-0.91940	17.65630	15.43300	K562	EIF4A3
TIMM17A	ENSG00000134375.6	2191.82150	3082.04640	-0.49180	16.99190	15.35180	K562	NSUN2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 130 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TIMM17A is not available on ENCORE database.

6 RBPs can affect the splicing of TIMM17A :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	is_included	Cell Line	Affected by RBP
SE	TIMM17A	ENSG00000134375.6	chr1	+	201926408	201926508			201924633	201924680	201926638	201926702	-0.07500	excluded	K562	AQR
SE	TIMM17A	ENSG00000134375.6	chr1	+	201927966	201928036			201926638	201926702	201932743	201932872	0.05200	included	K562	EIF3G
A3SS	TIMM17A	ENSG00000134375.6	chr1	+	201932696	201932872			201932743	201932872	201926638	201926702	0.05600	longer	K562	AQR
A5SS	TIMM17A	ENSG00000134375.6	chr1	+	201924618	201924800			201924618	201924680	201926408	201926508	0.05400	longer	K562	AQR
MXE	TIMM17A	ENSG00000134375.6	chr1	+	201926638	201926702	201934560	201934671	201924618	201924680	201938596	201939789	0.09000	1included	K562	AQR
MXE	TIMM17A	ENSG00000134375.6	chr1	+	201932712	201932872	201934511	201934671	201926638	201926702	201938596	201939479	0.05800	1included	K562	AQR
MXE	TIMM17A	ENSG00000134375.6	chr1	+	201932712	201932872	201934560	201934671	201926638	201926702	201938596	201938845	0.05800	1included	K562	AQR
MXE	TIMM17A	ENSG00000134375.6	chr1	+	201932696	201932872	201934511	201934671	201926638	201926702	201938596	201939479	0.06000	1included	K562	AQR
MXE	TIMM17A	ENSG00000134375.6	chr1	+	201932696	201932872	201934560	201934671	201926638	201926702	201938596	201938845	0.05900	1included	K562	AQR
MXE	TIMM17A	ENSG00000134375.6	chr1	+	201926638	201926702	201932743	201932872	201924633	201924680	201934560	201934671	0.08000	1included	K562	SF3B4

Showing 1 to 10 of 16 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TIMM17A

General Information

Functions

Localization

Domains (AlphaFold: TIMM17A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TIMM17A is not avaliable on ENCORE database.

17 proteins are bound to TIMM17A RNA:

eCLIP assay for TIMM17A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TIMM17A is not available on ENCORE database.

109 RBPs can affect the gene expression of TIMM17A :

The Knockdown/knockout RNA-Seq assay for TIMM17A is not available on ENCORE database.

6 RBPs can affect the splicing of TIMM17A :

The Knockdown/knockout RNA-Seq assay for TIMM17A is not avaliable on ENCORE database.