RPL3

General Information

Gene Name : RPL3
Gene ID : ENSG00000100316.15
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RPL3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RPL3	ENSG00000100316.15	1475.09	2705.92	2090.51	ENCSR000AEF
HepG2	RPL3	ENSG00000100316.15	2791.28	1709.17	2250.23	ENCSR985KAT
K562	RPL3	ENSG00000100316.15	1984.34	1725.54	1854.94	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RPL3 is not avaliable on ENCORE database.

Proteins bound to RNA

RPL3 RNA is bound by 26 proteins.

CanvasJS.com

eCLIP assay for RPL3 is not avaliable on ENCORE database.

26 proteins are bound to RPL3 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	39715070	39715094	-	CDS,intron-Distal	5.79600	400.00000	K562	AATF
chr22	39715066	39715094	-	CDS,intron-Distal	5.65286	400.00000	HepG2	NOLC1
chr22	39711275	39711309	-	intron-Distal,intron-Proximal	3.18381	400.00000	HepG2	NIP7
chr22	39709855	39709869	-	intron-Distal,intron-Proximal	3.14385	400.00000	HepG2	NOLC1
chr22	39711239	39711248	-	intron-Distal	3.74154	400.00000	HepG2	NOLC1
chr22	39709886	39709894	-	intron-Distal,intron-Proximal	3.15756	400.00000	HepG2	NOLC1
chr22	39711248	39711264	-	intron-Distal	3.32144	400.00000	HepG2	NOLC1
chr22	39711222	39711272	-	intron-Distal,intron-Proximal	3.21589	400.00000	HepG2	NIP7
chr22	39709823	39709854	-	intron-Distal,intron-Proximal	3.32912	400.00000	K562	AATF
chr22	39711217	39711245	-	intron-Distal	4.15232	400.00000	K562	SMNDC1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 157 entries

eCLIP assay for RPL3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RPL3 is not available on ENCORE database.
140 RBPs can affect the levels of RPL3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RPL3 is not available on ENCORE database.

140 RBPs can affect the gene expression of RPL3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RPL3	ENSG00000100316.11	27494.03530	70130.30590	-1.35090	155.46570	153.33910	HepG2	SRSF1
RPL3	ENSG00000100316.11	22474.31400	64533.77210	-1.52180	151.81210	149.35480	HepG2	PTBP1
RPL3	ENSG00000100316.11	6041.04940	20286.15640	-1.74760	112.45570	110.18170	HepG2	TIAL1
RPL3	ENSG00000100316.11	24697.06140	69892.77950	-1.50080	102.17520	99.32740	HepG2	QKI
RPL3	ENSG00000100316.11	31897.07050	71820.32550	-1.17100	98.95810	96.91810	HepG2	NELFE
RPL3	ENSG00000100316.11	31439.95000	67188.92120	-1.09560	88.75140	86.32850	HepG2	SF3B4
RPL3	ENSG00000100316.11	6497.73430	19158.16310	-1.56000	75.90430	73.50280	HepG2	RPS19
RPL3	ENSG00000100316.11	31699.01370	63422.03620	-1.00050	70.98700	68.66550	HepG2	PCBP1
RPL3	ENSG00000100316.11	17218.56530	67614.70930	-1.97340	69.74540	66.82850	HepG2	NCBP2
RPL3	ENSG00000100316.11	19066.36860	35326.94970	-0.88970	67.02570	64.24610	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 169 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RPL3 is not available on ENCORE database.

29 RBPs can affect the splicing of RPL3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	RPL3	ENSG00000100316.11	chr22	-	39709629	39709734	39709195	39709315	39710111	39710213	-0.08900	0.00000	excluded	HepG2	U2AF1
A3SS	RPL3	ENSG00000100316.11	chr22	-	39711373	39711536	39711373	39711533	39712710	39712846	-0.29900	0.00000	shorter	K562	SF3B4
A3SS	RPL3	ENSG00000100316.11	chr22	-	39714404	39714589	39714404	39714571	39715599	39715776	-0.06200	0.00000	shorter	K562	TRA2A
A3SS	RPL3	ENSG00000100316.11	chr22	-	39711373	39711536	39711373	39711533	39712710	39712846	-0.39400	0.00000	shorter	HepG2	RBM22
A3SS	RPL3	ENSG00000100316.11	chr22	-	39710154	39710413	39710154	39710238	39710690	39710870	-0.69600	0.00000	shorter	K562	AQR
A3SS	RPL3	ENSG00000100316.11	chr22	-	39711373	39711536	39711373	39711533	39712710	39712846	-0.29000	0.00000	shorter	HepG2	SF3B4
RI	RPL3	ENSG00000100316.11	chr22	-	39709195	39710213	39709195	39709315	39710111	39710213	0.36400	0.00000	included	K562	PUS1
RI	RPL3	ENSG00000100316.11	chr22	-	39709195	39710213	39709195	39709315	39710111	39710213	0.32700	0.00001	included	K562	AGGF1
RI	RPL3	ENSG00000100316.11	chr22	-	39709195	39710213	39709195	39709315	39710111	39710213	0.51000	0.00002	included	HepG2	IGF2BP3
RI	RPL3	ENSG00000100316.11	chr22	-	39709195	39710213	39709195	39709315	39710111	39710213	0.33600	0.00000	included	K562	AKAP8L

Showing 1 to 10 of 35 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RPL3

General Information

Functions

Localization

Domains (AlphaFold: RPL3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RPL3 is not avaliable on ENCORE database.

26 proteins are bound to RPL3 RNA:

eCLIP assay for RPL3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RPL3 is not available on ENCORE database.

140 RBPs can affect the gene expression of RPL3 :

The Knockdown/knockout RNA-Seq assay for RPL3 is not available on ENCORE database.

29 RBPs can affect the splicing of RPL3 :

The Knockdown/knockout RNA-Seq assay for RPL3 is not avaliable on ENCORE database.