RNASE1

General Information

Gene Name       : RNASE1
Gene ID             : ENSG00000129538.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RNASE1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RNASE1ENSG00000129538.130.000.000.00ENCSR000AEF
HepG2RNASE1ENSG00000129538.130.330.120.23ENCSR985KAT
K562RNASE1ENSG00000129538.138.4213.0310.72ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RNASE1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RNASE1 RNA is bound by 6 proteins.  







eCLIP assay for RNASE1 is not avaliable on ENCORE database.





6 proteins are bound to RNASE1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr142126954921269655-3'-UTR,intron-Distal,intron-Proximal3.639573.01207K562IGF2BP2
chr142126966321269759-3'-UTR,intron-Distal3.650495.44885K562PCBP1
chr142127007321270192-3'-UTR,CDS,intron-Distal4.5257210.25818K562RPS3
chr142126968121269749-3'-UTR,intron-Distal4.237663.39506K562IGF2BP2
chr142127013921270182-3'-UTR,CDS,intron-Distal4.280004.13314K562SND1
chr142126973821269796-3'-UTR,CDS,intron-Distal3.497076.65537K562SND1
chr142126957521269653-3'-UTR,intron-Distal,intron-Proximal3.032513.51929K562DDX55
chr142126956321269639-3'-UTR,intron-Distal,intron-Proximal6.0820824.55662K562PABPC4
chr142126958021269640-3'-UTR,intron-Distal,intron-Proximal5.029988.21929K562PCBP1
chr142126997021270013-CDS,intron-Distal4.179125.58116K562SND1
chr142126990621269970-CDS,intron-Distal5.7996213.56126K562SND1
chr142126979621269859-CDS,intron-Distal4.563598.55362K562SND1
chr142126985921269906-CDS,intron-Distal5.017397.99808K562SND1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RNASE1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RNASE1 is not available on ENCORE database.

  • 150 RBPs can affect the levels of RNASE1.  








The Knockdown/knockout RNA-Seq assay for RNASE1 is not available on ENCORE database.





150 RBPs can affect the gene expression of RNASE1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RNASE1ENSG00000129538.97.299700.0000099999.999902.156401.60520HepG2ACO1
RNASE1ENSG00000129538.932.134204.724102.765904.263803.04030HepG2CCAR1
RNASE1ENSG00000129538.97.912000.0000099999.999902.165601.63370HepG2EIF2S1
RNASE1ENSG00000129538.918.003600.0000099999.999903.687302.80690HepG2FIP1L1
RNASE1ENSG00000129538.955.416600.528706.7117015.2748012.95470HepG2FUS
RNASE1ENSG00000129538.914.905900.0000099999.999904.111103.27900HepG2FXR1
RNASE1ENSG00000129538.921.369402.668003.001603.785702.58920HepG2GNB2L1
RNASE1ENSG00000129538.919.050704.406002.112202.012201.46120HepG2GPKOW
RNASE1ENSG00000129538.915.097801.426603.403602.165501.58810HepG2HNRNPA1
RNASE1ENSG00000129538.918.323000.0000099999.999905.415204.13230HepG2HNRNPM
RNASE1ENSG00000129538.956.251300.0000099999.9999014.9270013.20640HepG2MSI2
RNASE1ENSG00000129538.97.677600.0000099999.999902.241501.67390HepG2PUS1
RNASE1ENSG00000129538.914.888400.623704.577103.309402.80380HepG2SRSF1
RNASE1ENSG00000129538.948.680601.325605.198509.865408.81240HepG2SUCLG1
RNASE1ENSG00000129538.915.114400.0000099999.999903.378102.26370HepG2UPF2
RNASE1ENSG00000129538.947.08010195.04310-2.0506015.0593012.42210K562AARS
RNASE1ENSG00000129538.9775.78490224.953001.7859032.3674028.91450K562ABCF1
RNASE1ENSG00000129538.9588.66880154.684301.9280014.7161011.26340K562ADAR
RNASE1ENSG00000129538.91172.54590284.047402.0453057.7634055.23720K562AGGF1
RNASE1ENSG00000129538.9374.45570244.886600.612604.683902.67950K562AKAP1
RNASE1ENSG00000129538.9768.62120312.189701.2997014.3055011.65550K562AKAP8
RNASE1ENSG00000129538.91272.52070295.580102.1060015.1616013.42340K562AKAP8L
RNASE1ENSG00000129538.9688.85500166.391002.0495029.4833027.77290K562AQR
RNASE1ENSG00000129538.9651.66860310.164701.0710012.3746010.26520K562ATP5C1
RNASE1ENSG00000129538.9343.86980176.250900.964102.860701.52010K562BCCIP
RNASE1ENSG00000129538.9342.95340170.267201.010106.198304.73840K562BCLAF1
RNASE1ENSG00000129538.9989.34250174.727402.5013058.9442055.45760K562BOP1
RNASE1ENSG00000129538.9536.86350156.720501.7763024.5145020.82640K562BUD13
RNASE1ENSG00000129538.9647.01730151.507802.094303.526402.30500K562CCAR1
RNASE1ENSG00000129538.9564.34810339.400700.733503.837802.41820K562CCDC124
RNASE1ENSG00000129538.9801.08770313.735501.3523025.8431022.14320K562CEBPZ
RNASE1ENSG00000129538.9481.24550201.777801.2539010.913308.61700K562CIRBP
RNASE1ENSG00000129538.9749.82280323.572001.2124012.762709.69610K562CKAP4
RNASE1ENSG00000129538.91188.74830207.770502.5163013.5509011.24780K562CNOT7
RNASE1ENSG00000129538.9398.62640269.730200.563403.998502.65600K562CPEB4
RNASE1ENSG00000129538.91034.33280185.758802.4771073.4573069.76120K562CPSF6
RNASE1ENSG00000129538.9392.16660161.926401.276005.159702.58220K562CPSF7
RNASE1ENSG00000129538.9267.50400129.172901.050207.839405.92940K562CSTF2
RNASE1ENSG00000129538.91064.46160342.240101.6369038.0917035.25490K562CELF1
RNASE1ENSG00000129538.9573.68960333.266600.783503.853002.11290K562DDX19B
RNASE1ENSG00000129538.91050.72800360.622201.5427041.0303037.32420K562DDX21
RNASE1ENSG00000129538.9570.41730248.178901.200508.290406.40590K562DDX3X
RNASE1ENSG00000129538.9391.31280251.635900.636903.837202.22270K562DDX6
RNASE1ENSG00000129538.9495.16050169.661001.545109.912507.27590K562DHX30
RNASE1ENSG00000129538.9414.67760162.902601.347906.484204.45860K562DNAJC21
RNASE1ENSG00000129538.9321.89730156.914901.036506.259904.31700K562EEF2
RNASE1ENSG00000129538.9445.65020151.559801.555905.223403.94720K562EFTUD2
RNASE1ENSG00000129538.9510.48410272.668700.9046010.997108.53080K562EIF2S1
RNASE1ENSG00000129538.961.05990151.06270-1.306905.448504.48890K562EIF2S2
RNASE1ENSG00000129538.9298.62030162.188900.880503.899602.64610K562EIF3D
RNASE1ENSG00000129538.9387.76710278.296900.478502.913601.95100K562EIF4G2
RNASE1ENSG00000129538.9519.49250172.022501.594404.085902.05920K562ESF1
RNASE1ENSG00000129538.9368.58240226.366900.703202.958801.61360K562EWSR1
RNASE1ENSG00000129538.9799.74680402.479800.990506.676804.66010K562EXOSC5
RNASE1ENSG00000129538.9264.94670135.000300.972605.430203.07050K562FAM120A
RNASE1ENSG00000129538.9803.32350161.748502.3121054.3137050.84010K562FIP1L1
RNASE1ENSG00000129538.9883.12980189.056502.2237048.5807045.33180K562FMR1
RNASE1ENSG00000129538.9548.63730160.264701.775304.727503.50160K562FTO
RNASE1ENSG00000129538.9378.16420244.641700.628204.640902.25680K562FUBP3
RNASE1ENSG00000129538.9198.9208094.766101.069704.096602.42810K562FUS
RNASE1ENSG00000129538.998.08650269.67590-1.459106.105005.25900K562FXR1
RNASE1ENSG00000129538.9349.32750180.002300.956508.264305.69140K562G3BP1
RNASE1ENSG00000129538.9141.37890229.32520-0.697802.779602.06960K562G3BP2
RNASE1ENSG00000129538.9375.08840151.957601.3035011.095108.24820K562GEMIN5
RNASE1ENSG00000129538.9473.53630181.711901.3817020.6277018.08640K562GLRX3
RNASE1ENSG00000129538.9898.55030177.332802.3410056.7397053.12530K562GPKOW
RNASE1ENSG00000129538.91180.91540201.258402.5527072.5085068.92360K562GRSF1
RNASE1ENSG00000129538.9361.30380185.466800.962008.144204.95980K562GRWD1
RNASE1ENSG00000129538.9356.94750116.864701.6108011.183907.39200K562HLTF
RNASE1ENSG00000129538.9648.94270186.571401.7983012.823609.26230K562HNRNPA0
RNASE1ENSG00000129538.9440.62850228.241300.948909.940608.06130K562HNRNPA1
RNASE1ENSG00000129538.91009.10190227.848802.1468020.1801016.27450K562HNRNPA2B1
RNASE1ENSG00000129538.9788.36720194.546402.0187024.7120021.21040K562HNRNPAB
RNASE1ENSG00000129538.9354.07780213.320100.730904.829604.06170K562HNRNPC
RNASE1ENSG00000129538.9408.96340190.537501.1018010.611708.35700K562HNRNPF
RNASE1ENSG00000129538.9492.25620252.182100.964808.799006.83620K562HNRNPL
RNASE1ENSG00000129538.9200.37770133.064800.590502.292801.44910K562HNRNPM
RNASE1ENSG00000129538.9580.88030244.796101.246604.838301.93940K562HNRNPUL1
RNASE1ENSG00000129538.9864.20480360.806201.260003.453401.35010K562IGF2BP1
RNASE1ENSG00000129538.9422.10590188.370501.163909.829907.47710K562IGF2BP2
RNASE1ENSG00000129538.9611.13100189.995701.6854014.6351011.40500K562ILF2
RNASE1ENSG00000129538.9377.93670158.334401.255104.738202.79830K562ILF3
RNASE1ENSG00000129538.9450.67550152.888801.559503.545001.86890K562KHDRBS1
RNASE1ENSG00000129538.9858.64520313.628701.452907.159105.68240K562KIF1C
RNASE1ENSG00000129538.9747.08320151.475602.302106.063804.62020K562KRR1
RNASE1ENSG00000129538.9439.96150216.445301.023309.328606.49680K562LIN28B
RNASE1ENSG00000129538.9721.18140300.265001.264003.670402.37300K562MAK16
RNASE1ENSG00000129538.9559.73880173.105501.6930026.2790023.58950K562METAP2
RNASE1ENSG00000129538.9699.32170296.628201.2372016.1789013.70140K562MSI2
RNASE1ENSG00000129538.9936.60470191.043702.2934079.8472076.76390K562MTPAP
RNASE1ENSG00000129538.9802.11040246.276601.7034023.9699020.57960K562NAA15
RNASE1ENSG00000129538.9433.31320258.903400.742906.611004.74500K562NCBP2
RNASE1ENSG00000129538.9293.95170122.116401.267206.557003.42280K562NFX1
RNASE1ENSG00000129538.9243.54290149.545400.703503.081801.69660K562NONO
RNASE1ENSG00000129538.9585.50070240.758401.282005.703802.16170K562NPM1
RNASE1ENSG00000129538.91055.19790212.281802.3134097.9335094.82650K562NSUN2
RNASE1ENSG00000129538.9300.47300159.019600.917905.371702.85750K562PA2G4
RNASE1ENSG00000129538.9888.53470199.609302.1541027.6520024.09060K562PABPC1
RNASE1ENSG00000129538.9460.08860242.103100.926207.718004.79550K562PABPC4
RNASE1ENSG00000129538.91522.08140199.150502.9340015.7753012.79560K562PABPN1
RNASE1ENSG00000129538.9378.99600151.948001.318504.706101.99140K562PARN
RNASE1ENSG00000129538.9336.54830143.647001.228209.547406.29530K562PES1
RNASE1ENSG00000129538.9426.84660208.299201.035009.664406.92750K562PHF6
RNASE1ENSG00000129538.9575.61250183.651701.6480025.6148022.07290K562PPIG
RNASE1ENSG00000129538.9519.95360185.023301.490607.794504.74270K562PPIL4
RNASE1ENSG00000129538.9819.82770236.617801.7927013.026409.48560K562PPP1R8
RNASE1ENSG00000129538.9433.79710191.275601.1813011.360709.25730K562PSIP1
RNASE1ENSG00000129538.990.04450192.24580-1.094207.124806.09680K562PTBP1
RNASE1ENSG00000129538.9552.79600323.014000.775107.209405.42340K562PUM1
RNASE1ENSG00000129538.9776.29230316.439201.2946023.6936021.10460K562PUM2
RNASE1ENSG00000129538.92423.02990293.020803.0476020.8354019.37650K562PUS1
RNASE1ENSG00000129538.9384.23370161.717601.248404.426201.95240K562RBFOX2
RNASE1ENSG00000129538.91130.00820285.598801.9842016.7918015.31530K562RBM15
RNASE1ENSG00000129538.9425.03720217.245300.968203.924102.29740K562RBM25
RNASE1ENSG00000129538.9877.24980244.989401.840207.492904.65970K562RBM39
RNASE1ENSG00000129538.9412.69720174.571001.2412014.0088011.79110K562RCC2
RNASE1ENSG00000129538.999.79640193.94200-0.958605.383803.79220K562NELFE
RNASE1ENSG00000129538.9392.22750232.502300.754303.987001.87050K562RECQL
RNASE1ENSG00000129538.986.28290150.17020-0.799502.426001.66270K562RPS19
RNASE1ENSG00000129538.9311.031501068.73410-1.7808034.8014031.36290K562RPS3
RNASE1ENSG00000129538.9502.58140150.732001.7373017.5673014.56720K562RRP9
RNASE1ENSG00000129538.9188.55880349.98270-0.892303.219602.05010K562SAFB
RNASE1ENSG00000129538.9572.56230198.444201.528607.046203.58940K562SART3
RNASE1ENSG00000129538.9646.37950189.311101.7715017.9482014.32360K562SBDS
RNASE1ENSG00000129538.9512.00300182.040301.491803.211501.89040K562SF1
RNASE1ENSG00000129538.9994.17960209.445502.2468029.9976027.65130K562SF3A3
RNASE1ENSG00000129538.9450.29510168.727001.416103.946202.77330K562SF3B1
RNASE1ENSG00000129538.9771.90260221.799101.799104.429302.62400K562SFPQ
RNASE1ENSG00000129538.9660.96450166.783801.9865019.3811016.39750K562SLBP
RNASE1ENSG00000129538.9242.18300127.741800.922803.981401.57950K562SMNDC1
RNASE1ENSG00000129538.9868.33220209.198902.0533016.5767012.96980K562SNRNP200
RNASE1ENSG00000129538.9371.24010165.482801.1656010.695008.31950K562SRFBP1
RNASE1ENSG00000129538.9307.88680147.358201.063005.456003.07570K562SRP68
RNASE1ENSG00000129538.9370.64450178.031401.057809.724507.61920K562SRSF5
RNASE1ENSG00000129538.9888.08570321.860701.4642028.9139025.35600K562SRSF7
RNASE1ENSG00000129538.9246.62710110.555801.157504.804403.04820K562SSB
RNASE1ENSG00000129538.9433.03010212.188401.029008.851606.28070K562SSRP1
RNASE1ENSG00000129538.9554.19430194.050801.5139019.4915016.41780K562STAU1
RNASE1ENSG00000129538.9651.55020185.299401.8139014.2085010.92020K562STIP1
RNASE1ENSG00000129538.9479.56530264.921900.856108.301005.90790K562SUCLG1
RNASE1ENSG00000129538.9980.23520256.428201.934504.059101.65640K562SUGP2
RNASE1ENSG00000129538.91320.47530250.140802.4001017.3127013.52440K562SUPT6H
RNASE1ENSG00000129538.9512.03640142.688401.8433017.9138015.34160K562SUPV3L1
RNASE1ENSG00000129538.9128.45340393.88610-1.616506.945705.63000K562SYNCRIP
RNASE1ENSG00000129538.9375.95170130.137101.530404.331202.25110K562TFIP11
RNASE1ENSG00000129538.9792.77060183.968202.1073021.7110018.92450K562TIAL1
RNASE1ENSG00000129538.9499.40310195.505901.352909.495907.49390K562TRIM56
RNASE1ENSG00000129538.9490.76030189.079101.3759011.114008.30940K562TRIP6
RNASE1ENSG00000129538.9683.98970344.392400.989805.526803.71070K562TROVE2
RNASE1ENSG00000129538.9390.89590222.002400.816104.867103.33180K562U2AF1
RNASE1ENSG00000129538.9405.48690229.374500.821907.501706.17730K562U2AF2
RNASE1ENSG00000129538.9795.82430342.384101.2167018.9973015.98610K562UBE2L3
RNASE1ENSG00000129538.9389.23970151.073701.3653010.821708.75750K562UCHL5
RNASE1ENSG00000129538.9802.50730225.085701.8339010.908009.59860K562UPF1
RNASE1ENSG00000129538.91347.38300297.207402.180503.691202.13090K562UTP18
RNASE1ENSG00000129538.9646.80390195.130501.7288025.2497022.32850K562UTP3
RNASE1ENSG00000129538.91078.46770192.600702.4852023.1688020.77190K562WDR3
RNASE1ENSG00000129538.9425.44450197.329001.108305.954004.06390K562WRN
RNASE1ENSG00000129538.9444.56830153.923001.5301017.1406013.98850K562XRN2
RNASE1ENSG00000129538.9916.84620246.094001.8974010.415006.80860K562YTHDC2
RNASE1ENSG00000129538.91163.50520187.353302.6345064.1533060.33690K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RNASE1 is not available on ENCORE database.





4 RBPs can affect the splicing of RNASE1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERNASE1ENSG00000129538.9chr14-212704072127047821269504212702522127095521271014-0.096000.000010.00090excludedK562AKAP8L
SERNASE1ENSG00000129538.9chr14-2127040721270478212695042127025221270955212710140.181000.000110.00182includedK562AQR
SERNASE1ENSG00000129538.9chr14-212704072127047821269504212702522127095521271014-0.065000.005140.06348excludedK562PUS1
SERNASE1ENSG00000129538.9chr14-212704072127047821269504212702522127095521271014-0.086000.000240.00911excludedK562AGGF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RNASE1 is not avaliable on ENCORE database.