RASSF4

General Information

Gene Name : RASSF4
Gene ID : ENSG00000107551.20
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RASSF4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RASSF4	ENSG00000107551.20	3.95	7.29	5.62	ENCSR000AEF
HepG2	RASSF4	ENSG00000107551.20	38.89	24.80	31.84	ENCSR985KAT
K562	RASSF4	ENSG00000107551.20	0.06	0.07	0.07	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RASSF4 is not avaliable on ENCORE database.

Proteins bound to RNA

RASSF4 RNA is bound by 18 proteins.

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eCLIP assay for RASSF4 is not avaliable on ENCORE database.

18 proteins are bound to RASSF4 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	45465710	45465912	+	CDS,intron-Distal,intron-Proximal	3.96046	38.55054	HepG2	EFTUD2
chr10	45470945	45471062	+	intron-Distal	5.72189	25.77519	HepG2	DDX59
chr10	45465654	45465775	+	CDS,intron-Proximal	4.17980	20.89980	HepG2	GRWD1
chr10	45465667	45465765	+	CDS,intron-Proximal	3.96972	19.87657	HepG2	PRPF8
chr10	45470973	45471054	+	intron-Distal	5.33239	18.83078	HepG2	PCBP2
chr10	45484813	45484863	+	3'-UTR,CDS,intron-Proximal	5.21726	16.83003	HepG2	PRPF8
chr10	45465673	45465759	+	CDS,intron-Proximal	3.17251	13.72927	HepG2	PPIG
chr10	45465674	45465752	+	CDS,intron-Proximal	3.17201	12.65150	HepG2	BUD13
chr10	45485131	45485200	+	3'-UTR,CDS,intron-Proximal	4.35843	11.83008	HepG2	PRPF8
chr10	45471128	45471170	+	intron-Distal	4.23646	10.23922	HepG2	DDX59
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 50 entries

eCLIP assay for RASSF4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RASSF4 is not available on ENCORE database.
86 RBPs can affect the levels of RASSF4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RASSF4 is not available on ENCORE database.

86 RBPs can affect the gene expression of RASSF4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RASSF4	ENSG00000107551.16	3051.81620	982.24620	1.63540	38.75060	36.67920	HepG2	GPKOW
RASSF4	ENSG00000107551.16	1025.74880	2051.86670	-1.00030	37.08410	35.79890	HepG2	SRFBP1
RASSF4	ENSG00000107551.16	2843.52650	1143.31650	1.31440	37.39290	35.55940	HepG2	HNRNPA1
RASSF4	ENSG00000107551.16	868.64060	1816.67480	-1.06450	29.92750	28.58750	HepG2	RBM22
RASSF4	ENSG00000107551.16	2217.25850	937.38060	1.24200	25.48920	23.89620	HepG2	HNRNPLL
RASSF4	ENSG00000107551.16	798.29440	2141.64440	-1.42370	25.27660	23.85370	HepG2	AKAP1
RASSF4	ENSG00000107551.16	2180.65540	831.20690	1.39140	24.34830	22.45340	HepG2	NSUN2
RASSF4	ENSG00000107551.16	2811.52000	1394.17890	1.01180	22.47150	20.78930	HepG2	DDX21
RASSF4	ENSG00000107551.16	2714.80970	1193.04770	1.18610	22.46820	20.49080	HepG2	XRN2
RASSF4	ENSG00000107551.16	2158.21700	1343.67520	0.68360	21.25720	19.46480	HepG2	DDX19B
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 86 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RASSF4 is not available on ENCORE database.

23 RBPs can affect the splicing of RASSF4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	RASSF4	ENSG00000107551.16	chr10	+	45465612	45467296	45465612	45465712	45467220	45467296	0.11100	0.00000	0.00021	included	HepG2	TIA1
RI	RASSF4	ENSG00000107551.16	chr10	+	45465612	45467296	45465612	45465712	45467220	45467296	0.15700	0.00000	0.00010	included	HepG2	PRPF8
RI	RASSF4	ENSG00000107551.16	chr10	+	45465612	45467296	45465612	45465712	45467220	45467296	0.12900	0.00000	0.00000	included	HepG2	QKI
RI	RASSF4	ENSG00000107551.16	chr10	+	45465612	45467296	45465612	45465712	45467220	45467296	0.12300	0.00000	0.00002	included	HepG2	G3BP1
RI	RASSF4	ENSG00000107551.16	chr10	+	45465612	45467296	45465612	45465712	45467220	45467296	0.14500	0.00000	0.00000	included	HepG2	KHSRP
RI	RASSF4	ENSG00000107551.16	chr10	+	45465612	45467296	45465612	45465712	45467220	45467296	0.23900	0.00000	0.00000	included	HepG2	FUBP3
RI	RASSF4	ENSG00000107551.16	chr10	+	45465612	45467296	45465612	45465712	45467220	45467296	0.23200	0.00000	0.00000	included	HepG2	HNRNPK
RI	RASSF4	ENSG00000107551.16	chr10	+	45465612	45467296	45465612	45465712	45467220	45467296	0.12100	0.00000	0.00005	included	HepG2	PTBP1
SE	RASSF4	ENSG00000107551.16	chr10	+	45477968	45478111	45465612	45467296	45479469	45479561	-0.11400	0.00005	0.00223	excluded	HepG2	SRSF1
RI	RASSF4	ENSG00000107551.16	chr10	+	45465612	45467296	45465612	45465712	45467220	45467296	0.08600	0.00005	0.00325	included	HepG2	MATR3

Showing 1 to 10 of 31 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RASSF4

General Information

Functions

Localization

Domains (AlphaFold: RASSF4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RASSF4 is not avaliable on ENCORE database.

18 proteins are bound to RASSF4 RNA:

eCLIP assay for RASSF4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RASSF4 is not available on ENCORE database.

86 RBPs can affect the gene expression of RASSF4 :

The Knockdown/knockout RNA-Seq assay for RASSF4 is not available on ENCORE database.

23 RBPs can affect the splicing of RASSF4 :

The Knockdown/knockout RNA-Seq assay for RASSF4 is not avaliable on ENCORE database.