RANBP3

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RANBP3	ENSG00000031823.14	23.94	41.24	32.59	ENCSR000AEF
HepG2	RANBP3	ENSG00000031823.14	94.86	49.67	72.27	ENCSR985KAT
K562	RANBP3	ENSG00000031823.14	59.19	46.32	52.75	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RANBP3 is not avaliable on ENCORE database.

Proteins bound to RNA

RANBP3 RNA is bound by 43 proteins.

eCLIP assay for RANBP3 is not avaliable on ENCORE database.

43 proteins are bound to RANBP3 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	5917841	5917992	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.66277	9.22328	HepG2	PABPN1
chr19	5951315	5951425	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.54886	5.62745	HepG2	HNRNPK
chr19	5931514	5931589	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.45624	3.67894	HepG2	AQR
chr19	5933450	5933510	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.05167	14.19213	HepG2	BUD13
chr19	5933423	5933453	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.24449	3.00343	HepG2	GRWD1
chr19	5923827	5923919	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.95282	6.43352	HepG2	PABPN1
chr19	5916935	5917015	-	3'-UTR,intron-Distal	3.59052	5.18546	HepG2	UPF1
chr19	5933510	5933564	-	3'-UTR,intron-Distal,intron-Proximal	4.12475	5.56912	HepG2	AQR
chr19	5941600	5941671	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.02502	7.22448	HepG2	GRWD1
chr19	5928085	5928166	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37951	3.37120	HepG2	SF3B4
chr19	5932498	5932575	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.28036	5.85044	HepG2	AQR
chr19	5941811	5941860	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.17754	7.20932	HepG2	EFTUD2
chr19	5918597	5918707	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.26951	6.38747	HepG2	AQR
chr19	5917260	5917341	-	3'-UTR,intron-Distal,intron-Proximal,polyA_site	4.84914	6.52213	HepG2	UPF1
chr19	5918608	5918651	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.81638	4.68902	HepG2	PPIG
chr19	5916218	5916300	-	3'-UTR,intron-Distal	4.46362	4.56348	K562	UPF1
chr19	5924765	5924850	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.78958	8.30573	K562	AQR
chr19	5927954	5928011	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.24127	5.43815	HepG2	PRPF8
chr19	5917463	5917550	-	3'-UTR,intron-Distal	3.14649	5.65018	K562	IGF2BP2
chr19	5916766	5916890	-	3'-UTR,intron-Distal	5.22017	8.28148	HepG2	UPF1
chr19	5941792	5941877	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.18456	7.99161	HepG2	PRPF8
chr19	5931380	5931434	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.14126	4.50321	HepG2	PRPF8
chr19	5932423	5932498	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.53376	3.90373	HepG2	AQR
chr19	5950806	5950864	-	3'-UTR,CDS,intron-Distal	3.97515	3.48187	K562	RBM15
chr19	5941563	5941644	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.02731	4.86944	K562	AQR
chr19	5916584	5916659	-	3'-UTR,intron-Distal	4.80272	6.23064	HepG2	UPF1
chr19	5918513	5918575	-	3'-UTR,CDS,intron-Distal	3.32774	5.58370	HepG2	PPIG
chr19	5925681	5925770	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.56731	3.90373	HepG2	AQR
chr19	5933414	5933450	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.23351	4.40435	HepG2	BUD13
chr19	5921142	5921215	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.99204	7.02967	HepG2	PRPF8
chr19	5933438	5933513	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.51109	8.77060	K562	AQR
chr19	5941715	5941778	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.01943	6.86590	K562	SF3B4
chr19	5941679	5941769	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.64533	9.43339	K562	EFTUD2
chr19	5932506	5932565	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.19651	7.35930	HepG2	BUD13
chr19	5941595	5941666	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.72053	3.70131	HepG2	PRPF8
chr19	5933422	5933505	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.57774	6.45164	K562	BUD13
chr19	5917260	5917333	-	3'-UTR,intron-Distal,intron-Proximal	3.57597	4.51064	HepG2	AKAP1
chr19	5941671	5941720	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.09938	5.24980	HepG2	GRWD1
chr19	5932459	5932503	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.43894	5.58370	HepG2	PPIG
chr19	5941620	5941663	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.13450	5.77687	HepG2	PPIG
chr19	5917802	5917868	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.01817	3.84771	K562	ZNF622
chr19	5950766	5950813	-	3'-UTR,intron-Distal	3.81005	4.93978	HepG2	BCLAF1
chr19	5916809	5916867	-	3'-UTR,intron-Distal	4.46041	4.85237	K562	UPF1
chr19	5933505	5933553	-	3'-UTR,intron-Distal,intron-Proximal	4.11993	8.99330	HepG2	RBM5
chr19	5917637	5917665	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.13093	3.47879	HepG2	PPIG
chr19	5935726	5935806	-	3'-UTR,intron-Distal	3.75698	6.34658	K562	NONO
chr19	5933368	5933510	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.37127	11.15919	HepG2	AQR
chr19	5918611	5918653	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.57477	5.19978	HepG2	BUD13
chr19	5923902	5923993	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.28732	7.09786	HepG2	AQR
chr19	5916322	5916400	-	3'-UTR,intron-Distal	4.57488	5.35992	HepG2	UPF1
chr19	5927978	5928099	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.06725	4.70577	HepG2	G3BP1
chr19	5932511	5932566	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.50705	5.62662	K562	BUD13
chr19	5941574	5941683	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.28919	10.96605	HepG2	BUD13
chr19	5917142	5917235	-	3'-UTR,intron-Distal,intron-Proximal	3.34353	4.92291	HepG2	UPF1
chr19	5923155	5923241	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.42805	10.26986	HepG2	PRPF8
chr19	5924745	5924864	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.02432	14.36606	HepG2	PRPF8
chr19	5941792	5941845	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.86583	5.84589	K562	EFTUD2
chr19	5933362	5933497	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.47746	14.64138	HepG2	PRPF8
chr19	5978019	5978077	-	5'-UTR,CDS,intron-Distal	3.25002	7.13280	HepG2	PRPF8
chr19	5978023	5978102	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.18968	12.58458	HepG2	EFTUD2
chr19	5978024	5978089	-	5'-UTR,CDS,intron-Distal	5.40103	7.09786	HepG2	AQR
chr19	5957891	5957931	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.04806	6.23016	HepG2	PRPF8
chr19	5931329	5931424	-	CDS,intron-Distal,intron-Proximal	3.29256	4.38107	K562	AQR
chr19	5977748	5977828	-	intron-Distal	3.87386	7.00469	K562	NONO
chr19	5969097	5969167	-	intron-Distal	4.04262	4.07750	HepG2	HNRNPK
chr19	5976033	5976113	-	intron-Distal	3.39702	4.51091	HepG2	HNRNPL
chr19	5957449	5957541	-	intron-Distal	4.65835	6.32269	K562	CSTF2T
chr19	5975555	5975597	-	intron-Distal	3.94683	3.54208	HepG2	SUGP2
chr19	5957328	5957419	-	intron-Distal	3.14658	7.14149	K562	NONO
chr19	5962536	5962612	-	intron-Distal	3.77851	6.59396	K562	NONO
chr19	5937920	5937983	-	intron-Distal	3.07988	5.28375	HepG2	HNRNPM
chr19	5956095	5956125	-	intron-Distal	4.08449	4.02766	HepG2	HNRNPC
chr19	5959864	5959896	-	intron-Distal	3.75216	3.06347	K562	NONO
chr19	5964606	5964677	-	intron-Distal	5.03632	8.50262	HepG2	HNRNPK
chr19	5972449	5972517	-	intron-Distal	3.33468	3.90822	HepG2	HNRNPM
chr19	5956721	5956746	-	intron-Distal	3.66961	4.28420	HepG2	HNRNPM
chr19	5958138	5958220	-	intron-Distal	3.87678	3.80299	K562	HNRNPL
chr19	5957252	5957402	-	intron-Distal	3.87784	7.92216	HepG2	SFPQ
chr19	5957264	5957338	-	intron-Distal	4.10188	4.27460	K562	HNRNPM
chr19	5953926	5953993	-	intron-Distal	4.73366	5.72853	HepG2	HNRNPM
chr19	5962045	5962137	-	intron-Distal	3.61892	4.94813	HepG2	HNRNPM
chr19	5957484	5957548	-	intron-Distal	5.21225	8.11443	HepG2	FAM120A
chr19	5956685	5956721	-	intron-Distal	4.07622	6.98528	HepG2	HNRNPM
chr19	5977923	5978063	-	intron-Distal	4.12086	13.28529	K562	AKAP8L
chr19	5977945	5978059	-	intron-Distal	3.00371	3.53327	HepG2	FAM120A
chr19	5977905	5978023	-	intron-Distal	3.10277	15.40921	HepG2	EFTUD2
chr19	5938811	5938870	-	intron-Distal	3.64328	5.85078	HepG2	HNRNPK
chr19	5957477	5957548	-	intron-Distal	5.03041	4.06667	K562	GTF2F1
chr19	5957132	5957195	-	intron-Distal	3.89462	4.61500	HepG2	HNRNPM
chr19	5959752	5959807	-	intron-Distal	4.36336	4.96496	K562	NONO
chr19	5974666	5974766	-	intron-Distal	3.52450	12.63404	HepG2	HNRNPM
chr19	5959238	5959321	-	intron-Distal	4.21737	3.83943	K562	HNRNPK
chr19	5977925	5978042	-	intron-Distal	3.25643	5.08123	K562	DDX52
chr19	5941849	5941922	-	intron-Distal,intron-Proximal	4.96706	15.60614	HepG2	SF3B4
chr19	5956605	5956682	-	intron-Distal	3.30193	3.38183	K562	NONO
chr19	5934960	5935035	-	intron-Distal	3.69981	3.59783	HepG2	HNRNPK
chr19	5957804	5957879	-	intron-Distal,intron-Proximal	3.56946	5.55825	HepG2	U2AF2
chr19	5964757	5964833	-	intron-Distal	4.11506	3.33442	K562	HNRNPK
chr19	5941871	5941969	-	intron-Distal,intron-Proximal	3.80296	5.55843	HepG2	RBFOX2
chr19	5975464	5975537	-	intron-Distal	3.48668	4.38938	K562	TARDBP
chr19	5927819	5927915	-	intron-Distal,intron-Proximal	4.29667	4.48529	K562	TIA1
chr19	5977982	5978056	-	intron-Distal	4.06635	3.19625	HepG2	NCBP2
chr19	5928570	5928657	-	intron-Distal	4.36280	13.02795	HepG2	HNRNPL
chr19	5952077	5952120	-	intron-Distal	4.08628	3.53509	HepG2	HLTF
chr19	5924282	5924345	-	intron-Distal	3.81529	5.02960	HepG2	SUPV3L1
chr19	5931300	5931407	-	intron-Distal,intron-Proximal	5.57301	12.50172	HepG2	RBFOX2
chr19	5966873	5966920	-	intron-Distal	4.30563	3.45799	HepG2	U2AF2
chr19	5940950	5941080	-	intron-Distal	3.45138	4.32964	K562	HNRNPM
chr19	5974677	5974733	-	intron-Distal	3.43234	3.12686	HepG2	SFPQ
chr19	5977622	5977660	-	intron-Distal	3.82737	3.19904	K562	TIA1
chr19	5941456	5941573	-	intron-Distal,intron-Proximal	3.28161	6.79612	K562	NONO
chr19	5932565	5932624	-	intron-Distal,intron-Proximal	3.47384	4.29246	HepG2	SF3B4
chr19	5927825	5927895	-	intron-Distal,intron-Proximal	3.38889	4.88100	K562	AQR
chr19	5977593	5977700	-	intron-Distal	3.37377	6.76916	HepG2	HNRNPK
chr19	5959270	5959337	-	intron-Distal	4.14207	4.36307	HepG2	HNRNPK
chr19	5958903	5958968	-	intron-Distal	3.76128	13.78585	HepG2	XPO5
chr19	5959846	5959939	-	intron-Distal	4.11967	6.83279	HepG2	NKRF
chr19	5959411	5959454	-	intron-Distal	3.93345	3.57432	K562	NONO
chr19	5977940	5978054	-	intron-Distal	3.06543	4.03654	HepG2	SFPQ
chr19	5957488	5957544	-	intron-Distal	4.22471	3.57264	HepG2	GTF2F1
chr19	5941726	5941770	-	intron-Distal,intron-Proximal	4.64911	6.67793	HepG2	EFTUD2
chr19	5957399	5957490	-	intron-Distal	3.78045	3.20552	HepG2	KHSRP
chr19	5940955	5941016	-	intron-Distal	4.21938	4.28420	HepG2	HNRNPM
chr19	5977481	5977562	-	intron-Distal	4.92354	8.12204	HepG2	HNRNPK
chr19	5975797	5975840	-	intron-Distal	4.62325	5.41525	HepG2	PCBP2
chr19	5959151	5959219	-	intron-Distal	3.68965	4.09699	HepG2	HNRNPK
chr19	5941858	5941922	-	intron-Distal,intron-Proximal	6.37262	14.64025	K562	SF3B4
chr19	5977886	5977971	-	intron-Distal	3.65747	8.12417	K562	NONO
chr19	5975256	5975322	-	intron-Distal	4.12193	3.31905	K562	NONO
chr19	5936311	5936367	-	intron-Distal	3.03508	3.83975	HepG2	RBFOX2
chr19	5977913	5978042	-	intron-Distal	4.21519	5.59743	K562	DROSHA
chr19	5956869	5956951	-	intron-Distal	4.44175	4.84226	K562	NONO
chr19	5965520	5965582	-	intron-Distal	4.20982	3.65412	HepG2	HNRNPK
chr19	5957494	5957565	-	intron-Distal	4.39579	4.61649	HepG2	CSTF2T
chr19	5928563	5928649	-	intron-Distal	4.58987	6.09580	K562	HNRNPL
chr19	5928943	5928993	-	intron-Distal	3.30381	4.23017	HepG2	HNRNPL
chr19	5921134	5921211	-	intron-Distal,intron-Proximal	4.55098	3.93614	HepG2	AQR
chr19	5957344	5957391	-	intron-Distal	3.80966	4.61500	HepG2	HNRNPM
chr19	5975934	5976072	-	intron-Distal	3.43999	8.89060	HepG2	HNRNPK
chr19	5977821	5977981	-	intron-Distal	3.03800	3.51436	HepG2	XRN2
chr19	5945854	5945987	-	intron-Distal	4.26547	6.73715	HepG2	PRPF4
chr19	5974898	5974959	-	intron-Distal	3.30692	4.25264	K562	NONO
chr19	5935872	5935908	-	intron-Distal,intron-Proximal	3.80393	3.07008	K562	NONO
chr19	5933337	5933409	-	intron-Distal,intron-Proximal	4.89579	5.26064	K562	AQR
chr19	5975915	5976036	-	intron-Distal	3.68693	5.25314	K562	HNRNPK
chr19	5977638	5977699	-	intron-Distal	4.61417	6.40241	K562	NONO
chr19	5941374	5941445	-	intron-Distal	3.24865	3.07653	K562	ZNF622
chr19	5941852	5941923	-	intron-Distal,intron-Proximal	5.96318	15.69624	HepG2	SF3A3
chr19	5977977	5978067	-	intron-Distal	5.25404	10.50469	K562	NONO
chr19	5965123	5965180	-	intron-Distal	4.21971	4.33022	HepG2	HNRNPK
chr19	5937893	5938000	-	intron-Distal	3.69819	8.57671	K562	NONO
chr19	5964292	5964338	-	intron-Distal	3.28139	3.23466	HepG2	CSTF2T
chr19	5977366	5977444	-	intron-Distal	4.28392	9.13964	K562	NONO
chr19	5974605	5974666	-	intron-Distal	3.37713	3.33745	HepG2	HNRNPM
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RANBP3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RANBP3 is not available on ENCORE database.
99 RBPs can affect the levels of RANBP3.

The Knockdown/knockout RNA-Seq assay for RANBP3 is not available on ENCORE database.

99 RBPs can affect the gene expression of RANBP3 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RANBP3	ENSG00000031823.10	412.18260	945.88890	-1.19840	19.76310	17.33090	HepG2	AATF
RANBP3	ENSG00000031823.10	1556.69700	2291.46720	-0.55780	4.70440	3.50310	HepG2	ABCF1
RANBP3	ENSG00000031823.10	1343.57320	1828.88510	-0.44490	2.11490	1.64310	HepG2	AKAP1
RANBP3	ENSG00000031823.10	1389.61140	1681.77300	-0.27530	3.20190	2.38340	HepG2	AKAP8L
RANBP3	ENSG00000031823.10	749.41100	1437.61110	-0.93980	6.06320	4.95000	HepG2	CIRBP
RANBP3	ENSG00000031823.10	1071.22560	1441.28520	-0.42810	3.66980	2.88870	HepG2	CPSF6
RANBP3	ENSG00000031823.10	2698.88040	1886.33550	0.51670	6.57560	4.93150	HepG2	CPSF7
RANBP3	ENSG00000031823.10	1116.66790	857.41190	0.38100	3.13440	2.04980	HepG2	YBX3
RANBP3	ENSG00000031823.10	1788.18620	1362.36590	0.39230	5.63430	4.77860	HepG2	CELF1
RANBP3	ENSG00000031823.10	1698.75410	1464.82960	0.21360	2.55140	1.83410	HepG2	DAZAP1
RANBP3	ENSG00000031823.10	1233.79690	1548.14850	-0.32740	4.81550	3.75490	HepG2	DDX19B
RANBP3	ENSG00000031823.10	572.64930	1042.84630	-0.86480	12.03690	10.73960	HepG2	DDX21
RANBP3	ENSG00000031823.10	600.78800	1021.13210	-0.76520	10.56910	8.82930	HepG2	DDX24
RANBP3	ENSG00000031823.10	924.19470	1751.66140	-0.92250	5.77330	4.90060	HepG2	DDX3X
RANBP3	ENSG00000031823.10	3940.26120	2932.67990	0.42600	3.23760	1.84040	HepG2	DDX47
RANBP3	ENSG00000031823.10	1334.09080	1819.42480	-0.44760	4.15000	2.91960	HepG2	DDX5
RANBP3	ENSG00000031823.10	2197.78960	1505.35440	0.54590	4.69940	3.91300	HepG2	DDX6
RANBP3	ENSG00000031823.10	937.26250	1601.51680	-0.77290	18.53630	17.13930	HepG2	DKC1
RANBP3	ENSG00000031823.10	1258.08220	834.48460	0.59220	12.49370	11.21390	HepG2	DNAJC2
RANBP3	ENSG00000031823.10	660.19210	960.83760	-0.54140	3.60330	2.32860	HepG2	AGO1
RANBP3	ENSG00000031823.10	773.88410	1050.28120	-0.44060	3.24290	2.27030	HepG2	EIF3D
RANBP3	ENSG00000031823.10	751.33950	985.21800	-0.39100	3.34300	2.17080	HepG2	EIF3G
RANBP3	ENSG00000031823.10	1453.22510	1984.51860	-0.44950	4.54360	3.17890	HepG2	ESF1
RANBP3	ENSG00000031823.10	1947.36510	2363.26220	-0.27930	3.63970	2.96500	HepG2	ETF1
RANBP3	ENSG00000031823.10	941.30280	1443.77290	-0.61710	2.29060	1.37380	HepG2	FTO
RANBP3	ENSG00000031823.10	1096.22650	1633.78640	-0.57570	5.23990	4.37760	HepG2	GPKOW
RANBP3	ENSG00000031823.10	1644.38060	1175.41520	0.48430	3.04210	1.60700	HepG2	HNRNPA0
RANBP3	ENSG00000031823.10	1686.55040	1404.91990	0.26350	2.88800	2.15680	HepG2	HNRNPF
RANBP3	ENSG00000031823.10	1638.67670	1334.33300	0.29630	4.35970	3.52720	HepG2	HNRNPL
RANBP3	ENSG00000031823.10	1274.83530	1559.15450	-0.29050	1.90750	1.37620	HepG2	HNRNPLL
RANBP3	ENSG00000031823.10	1269.79890	1595.91370	-0.32980	2.79550	1.83990	HepG2	HNRNPM
RANBP3	ENSG00000031823.10	1378.20800	939.18830	0.55320	10.27310	9.16750	HepG2	HNRNPU
RANBP3	ENSG00000031823.10	1857.99530	2460.76740	-0.40540	2.74600	1.52570	HepG2	HSPD1
RANBP3	ENSG00000031823.10	1165.28260	959.34890	0.28050	3.44180	2.63090	HepG2	ILF2
RANBP3	ENSG00000031823.10	1116.37330	1614.05790	-0.53190	2.64030	1.99970	HepG2	MAGOH
RANBP3	ENSG00000031823.10	1966.61180	1571.97330	0.32300	2.58010	1.40800	HepG2	NAA15
RANBP3	ENSG00000031823.10	1178.53870	1661.04630	-0.49510	2.57110	1.95860	HepG2	NCBP2
RANBP3	ENSG00000031823.10	734.65150	1382.50510	-0.91220	13.56640	12.04020	HepG2	NSUN2
RANBP3	ENSG00000031823.10	1846.94420	1269.68660	0.54060	2.83020	1.92930	HepG2	PABPC1
RANBP3	ENSG00000031823.10	2038.03790	1530.88830	0.41270	4.77260	4.01080	HepG2	PCBP1
RANBP3	ENSG00000031823.10	1239.65190	837.68000	0.56540	7.28790	6.13310	HepG2	PPIL4
RANBP3	ENSG00000031823.10	1241.27430	1600.86090	-0.36700	5.06400	4.05070	HepG2	PRPF4
RANBP3	ENSG00000031823.10	918.77790	1386.57510	-0.59370	7.24950	6.34300	HepG2	PUF60
RANBP3	ENSG00000031823.10	2003.45620	1471.92630	0.44470	10.22180	9.23200	HepG2	PUM1
RANBP3	ENSG00000031823.10	1345.86950	1705.03660	-0.34130	5.18990	4.39450	HepG2	PUS1
RANBP3	ENSG00000031823.10	2320.27640	1686.92130	0.45980	2.68880	2.07200	HepG2	QKI
RANBP3	ENSG00000031823.10	1386.20370	1975.22260	-0.51090	8.67060	7.87200	HepG2	RBM22
RANBP3	ENSG00000031823.10	2020.09740	1341.67890	0.59030	4.30930	2.41480	HepG2	RBM47
RANBP3	ENSG00000031823.10	1152.29730	1733.64980	-0.58930	5.25110	4.54430	HepG2	NELFE
RANBP3	ENSG00000031823.10	1252.40810	1513.47600	-0.27320	1.88350	1.30800	HepG2	RPLP0
RANBP3	ENSG00000031823.10	1078.38620	662.96710	0.70180	4.60130	3.61730	HepG2	RRP9
RANBP3	ENSG00000031823.10	1233.31720	836.38580	0.56020	10.39280	9.26680	HepG2	SAFB2
RANBP3	ENSG00000031823.10	1857.72850	1314.14600	0.49930	3.64740	2.15140	HepG2	SART3
RANBP3	ENSG00000031823.10	803.53890	1025.63460	-0.35210	2.45690	1.56840	HepG2	SERBP1
RANBP3	ENSG00000031823.10	1887.71050	1543.24180	0.29060	2.14100	1.51470	HepG2	SF3B1
RANBP3	ENSG00000031823.10	1849.13580	1329.54140	0.47580	10.51610	9.29080	HepG2	SLBP
RANBP3	ENSG00000031823.10	647.26510	1717.13180	-1.40760	14.89330	13.09690	HepG2	SNRNP70
RANBP3	ENSG00000031823.10	915.26940	1692.80520	-0.88710	9.17640	8.42730	HepG2	SRSF1
RANBP3	ENSG00000031823.10	1597.93980	1380.29500	0.21110	1.96620	1.36860	HepG2	SRSF7
RANBP3	ENSG00000031823.10	1395.37320	1936.85920	-0.47310	9.46250	8.62470	HepG2	SSB
RANBP3	ENSG00000031823.10	453.25940	865.35430	-0.93300	5.24290	4.35880	HepG2	SUPV3L1
RANBP3	ENSG00000031823.10	723.87970	1521.84090	-1.07200	12.13120	11.08570	HepG2	TAF15
RANBP3	ENSG00000031823.10	1592.21720	2408.69490	-0.59720	2.67940	1.62760	HepG2	TBRG4
RANBP3	ENSG00000031823.10	821.17430	579.94020	0.50170	2.46320	1.51590	HepG2	TFIP11
RANBP3	ENSG00000031823.10	528.16720	912.57840	-0.78900	11.59630	10.69790	HepG2	TIAL1
RANBP3	ENSG00000031823.10	1643.17380	920.75600	0.83550	23.33890	21.89930	HepG2	TRIM56
RANBP3	ENSG00000031823.10	2679.45050	1978.81700	0.43720	3.90840	3.16670	HepG2	U2AF1
RANBP3	ENSG00000031823.10	2109.66550	1433.89310	0.55700	5.34680	4.16530	HepG2	UBE2L3
RANBP3	ENSG00000031823.10	949.20540	511.10570	0.89300	9.63440	8.22140	HepG2	UCHL5
RANBP3	ENSG00000031823.10	1419.94550	1836.42500	-0.37110	5.98930	5.02490	HepG2	UPF1
RANBP3	ENSG00000031823.10	1004.00850	1579.84290	-0.65400	16.25670	14.85340	HepG2	ZC3H8
RANBP3	ENSG00000031823.10	2359.66850	2019.71140	0.22430	3.41080	2.82150	HepG2	ZNF622
RANBP3	ENSG00000031823.10	1745.35100	1258.69990	0.47150	8.37730	7.46330	K562	AGGF1
RANBP3	ENSG00000031823.10	1673.92710	1383.15640	0.27520	2.16460	1.30800	K562	AKAP8
RANBP3	ENSG00000031823.10	1595.71560	1309.74300	0.28480	1.99940	1.44220	K562	AKAP8L
RANBP3	ENSG00000031823.10	927.47170	1162.19190	-0.32550	2.11230	1.35610	K562	BOP1
RANBP3	ENSG00000031823.10	1024.21290	1235.71260	-0.27080	2.16030	1.45870	K562	CPSF6
RANBP3	ENSG00000031823.10	2142.08610	1800.30830	0.25070	2.84340	2.18300	K562	DDX47
RANBP3	ENSG00000031823.10	1795.48780	1409.32250	0.34930	4.65980	3.47730	K562	DKC1
RANBP3	ENSG00000031823.10	1077.96520	678.72460	0.66730	6.16510	4.75900	K562	EFTUD2
RANBP3	ENSG00000031823.10	677.16240	446.29070	0.60140	6.08350	4.91860	K562	EIF3G
RANBP3	ENSG00000031823.10	1015.73200	739.85080	0.45710	4.09850	3.10200	K562	EIF4A3
RANBP3	ENSG00000031823.10	876.65130	666.27790	0.39580	3.86390	2.46090	K562	EIF4B
RANBP3	ENSG00000031823.10	850.00110	645.81580	0.39620	3.66200	2.14680	K562	EWSR1
RANBP3	ENSG00000031823.10	1172.01570	769.41410	0.60710	9.48190	8.44150	K562	FXR1
RANBP3	ENSG00000031823.10	231.26020	409.95770	-0.82600	4.06030	3.16200	K562	G3BP2
RANBP3	ENSG00000031823.10	1366.98050	1058.15560	0.36930	2.37610	1.51610	K562	HNRNPM
RANBP3	ENSG00000031823.10	898.91560	614.91770	0.54770	2.94600	1.87780	K562	IGF2BP2
RANBP3	ENSG00000031823.10	755.11490	1007.44690	-0.41590	2.19260	1.37230	K562	KRR1
RANBP3	ENSG00000031823.10	916.07710	645.97310	0.50390	4.86090	3.73880	K562	MAGOH
RANBP3	ENSG00000031823.10	1643.50840	1330.53370	0.30470	2.62770	1.58860	K562	MAK16
RANBP3	ENSG00000031823.10	815.05870	644.61990	0.33840	2.47040	1.60280	K562	MATR3
RANBP3	ENSG00000031823.10	2093.28500	1557.08150	0.42680	4.94230	3.65690	K562	MBNL1
RANBP3	ENSG00000031823.10	1290.40540	1635.41890	-0.34180	6.04530	5.00190	K562	NSUN2
RANBP3	ENSG00000031823.10	818.53820	631.56950	0.37400	2.99770	1.59040	K562	PCBP1
RANBP3	ENSG00000031823.10	812.85620	574.70480	0.50010	4.25430	3.03620	K562	PCBP2
RANBP3	ENSG00000031823.10	1104.63340	660.48130	0.74190	8.04050	6.75640	K562	PRPF8
RANBP3	ENSG00000031823.10	911.44000	627.62440	0.53810	5.80820	4.87490	K562	PTBP1
RANBP3	ENSG00000031823.10	1576.48060	1298.84330	0.27940	2.08730	1.60310	K562	PUS1
RANBP3	ENSG00000031823.10	1609.09130	1265.57880	0.34630	3.98810	3.29240	K562	RBM15
RANBP3	ENSG00000031823.10	779.71550	601.66320	0.37390	2.59440	1.78210	K562	RBM22
RANBP3	ENSG00000031823.10	943.79320	672.65540	0.48850	3.02190	2.16800	K562	RPS19
RANBP3	ENSG00000031823.10	869.03610	629.76040	0.46450	3.10900	2.04120	K562	RPS3
RANBP3	ENSG00000031823.10	580.17430	425.94100	0.44570	3.43300	2.47620	K562	SF3B4
RANBP3	ENSG00000031823.10	900.42840	615.31270	0.54920	5.61710	4.61590	K562	SRSF1
RANBP3	ENSG00000031823.10	772.34260	607.91220	0.34530	2.24140	1.31250	K562	SRSF4
RANBP3	ENSG00000031823.10	768.98090	581.19460	0.40380	2.87590	1.80230	K562	SRSF5
RANBP3	ENSG00000031823.10	1010.34190	622.66860	0.69820	7.61170	6.37220	K562	TARDBP
RANBP3	ENSG00000031823.10	885.73200	600.65200	0.56020	5.93440	4.66640	K562	TIA1
RANBP3	ENSG00000031823.10	609.57280	837.11840	-0.45760	3.20470	2.19150	K562	TIAL1
RANBP3	ENSG00000031823.10	837.54930	589.57930	0.50640	4.10940	2.73500	K562	TRA2A
RANBP3	ENSG00000031823.10	1228.37380	1483.79040	-0.27250	2.15040	1.38020	K562	WDR3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RANBP3 is not available on ENCORE database.

18 RBPs can affect the splicing of RANBP3 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RANBP3	ENSG00000031823.10	chr19	-	5957928	5957984			5941809	5941846	5978071	5978097	-0.08400	0.00418	0.06458	excluded	K562	SF3B4
SE	RANBP3	ENSG00000031823.10	chr19	-	5941631	5941718			5933430	5933490	5978071	5978104	0.13700	0.00506	0.07681	included	HepG2	U2AF1
SE	RANBP3	ENSG00000031823.10	chr19	-	5957928	5957984			5941809	5941846	5978071	5978097	-0.11000	0.00004	0.00831	excluded	HepG2	HNRNPM
SE	RANBP3	ENSG00000031823.10	chr19	-	5957928	5957984			5941809	5941846	5978071	5978097	-0.08100	0.00174	0.04212	excluded	HepG2	HNRNPK
SE	RANBP3	ENSG00000031823.10	chr19	-	5941631	5941718			5933430	5933490	5978071	5978090	0.21200	0.00001	0.00269	included	HepG2	TBRG4
SE	RANBP3	ENSG00000031823.10	chr19	-	5957917	5957984			5941809	5941846	5978071	5978151	0.05900	0.00001	0.00021	included	HepG2	U2AF2
SE	RANBP3	ENSG00000031823.10	chr19	-	5941631	5941718			5933430	5933490	5978071	5978090	0.18200	0.00003	0.02457	included	HepG2	SUGP2
SE	RANBP3	ENSG00000031823.10	chr19	-	5957928	5957984			5941809	5941846	5978071	5978151	-0.12500	0.00075	0.00959	excluded	K562	AQR
SE	RANBP3	ENSG00000031823.10	chr19	-	5941631	5941718			5933430	5933490	5978071	5978104	-0.16100	0.00413	0.05375	excluded	K562	PUS1
SE	RANBP3	ENSG00000031823.10	chr19	-	5924837	5925748			5920902	5921332	5927978	5928098	-0.06600	0.00152	0.02406	excluded	K562	PUS1
SE	RANBP3	ENSG00000031823.10	chr19	-	5957917	5957984			5941809	5941846	5978071	5978151	0.06200	0.00001	0.00096	included	HepG2	SFPQ
SE	RANBP3	ENSG00000031823.10	chr19	-	5925644	5925748			5921211	5921332	5927978	5928098	-0.06000	0.00210	0.04929	excluded	K562	AGGF1
SE	RANBP3	ENSG00000031823.10	chr19	-	5957928	5957984			5941631	5941718	5978071	5978151	0.08300	0.00028	0.03714	included	K562	CPSF6
SE	RANBP3	ENSG00000031823.10	chr19	-	5931414	5931542			5927978	5928098	5932462	5932555	-0.17700	0.00003	0.00085	excluded	K562	HNRNPC
A3SS	RANBP3	ENSG00000031823.10	chr19	-	5932462	5932656			5932462	5932555	5933424	5933544	0.09200	0.00000	0.00000	longer	K562	AQR
A3SS	RANBP3	ENSG00000031823.10	chr19	-	5933424	5933667			5933424	5933490	5941631	5941718	0.07300	0.01684	0.08249	longer	K562	AQR
MXE	RANBP3	ENSG00000031823.10	chr19	-	5927978	5928098	5957928	5957984	5921211	5921332	5978071	5978151	-0.18600	0.00721	0.09336	2included	HepG2	U2AF1
MXE	RANBP3	ENSG00000031823.10	chr19	-	5931414	5931542	5932462	5932555	5927978	5928098	5933424	5933490	0.23200	0.00219	0.09570	1included	HepG2	XPO5
MXE	RANBP3	ENSG00000031823.10	chr19	-	5927978	5928098	5931414	5931542	5925644	5925748	5932462	5932555	0.11700	0.00000	0.00004	1included	HepG2	SFPQ
MXE	RANBP3	ENSG00000031823.10	chr19	-	5927978	5928098	5931414	5931542	5925644	5925748	5932462	5932555	0.21800	0.00000	0.00000	1included	HepG2	NOL12
MXE	RANBP3	ENSG00000031823.10	chr19	-	5927978	5928098	5931429	5931542	5925644	5925748	5932462	5932555	0.13000	0.00500	0.09434	1included	HepG2	XRN2
MXE	RANBP3	ENSG00000031823.10	chr19	-	5941631	5941718	5957928	5957984	5933484	5933490	5978071	5978104	0.17800	0.00518	0.08443	1included	HepG2	DDX55
MXE	RANBP3	ENSG00000031823.10	chr19	-	5941809	5941846	5957928	5957984	5941631	5941718	5978071	5978104	-0.14300	0.00003	0.00354	2included	HepG2	TBRG4
MXE	RANBP3	ENSG00000031823.10	chr19	-	5941631	5941718	5957928	5957984	5927978	5928098	5978071	5978104	-0.08900	0.00056	0.01264	2included	K562	HNRNPC
MXE	RANBP3	ENSG00000031823.10	chr19	-	5951403	5951607	5957928	5957984	5941809	5941846	5978071	5978096	-0.09100	0.00169	0.03065	2included	K562	HNRNPC
MXE	RANBP3	ENSG00000031823.10	chr19	-	5941631	5941718	5957928	5957984	5933424	5933490	5978071	5978104	0.12500	0.00272	0.07233	1included	K562	TAF15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RANBP3

General Information

Functions

Localization

Domains (AlphaFold: RANBP3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RANBP3 is not avaliable on ENCORE database.

43 proteins are bound to RANBP3 RNA:

eCLIP assay for RANBP3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RANBP3 is not available on ENCORE database.

99 RBPs can affect the gene expression of RANBP3 :

The Knockdown/knockout RNA-Seq assay for RANBP3 is not available on ENCORE database.

18 RBPs can affect the splicing of RANBP3 :

The Knockdown/knockout RNA-Seq assay for RANBP3 is not avaliable on ENCORE database.