MYH9

General Information

Gene Name : MYH9
Gene ID : ENSG00000100345.21
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MYH9)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MYH9	ENSG00000100345.21	77.67	85.25	81.46	ENCSR000AEF
HepG2	MYH9	ENSG00000100345.21	188.99	89.49	139.24	ENCSR985KAT
K562	MYH9	ENSG00000100345.21	32.12	21.04	26.58	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MYH9 is not avaliable on ENCORE database.

Proteins bound to RNA

MYH9 RNA is bound by 56 proteins.

CanvasJS.com

eCLIP assay for MYH9 is not avaliable on ENCORE database.

56 proteins are bound to MYH9 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	36677370	36677425	-	3'-UTR,intron-Distal	6.52922	400.00000	K562	PABPC4
chr22	36678544	36678614	-	3'-UTR,intron-Distal	5.01754	69.62204	HepG2	PCBP2
chr22	36690171	36690196	-	CDS,intron-Distal	5.64535	39.58988	HepG2	GRWD1
chr22	36684390	36684459	-	CDS,intron-Distal	4.23890	35.34091	HepG2	GRWD1
chr22	36678052	36678113	-	3'-UTR,intron-Distal	4.81104	33.10907	HepG2	PCBP2
chr22	36678464	36678522	-	3'-UTR,intron-Distal	4.52063	31.49057	HepG2	PCBP2
chr22	36690150	36690171	-	CDS,intron-Distal	5.34702	30.84995	HepG2	GRWD1
chr22	36678552	36678647	-	3'-UTR,intron-Distal	4.21325	30.40582	HepG2	PCBP1
chr22	36684318	36684390	-	CDS,intron-Distal	4.42756	30.18303	HepG2	GRWD1
chr22	36678435	36678552	-	3'-UTR,intron-Distal	3.74315	29.50089	HepG2	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 444 entries

eCLIP assay for MYH9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MYH9 is not available on ENCORE database.
123 RBPs can affect the levels of MYH9.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MYH9 is not available on ENCORE database.

123 RBPs can affect the gene expression of MYH9 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MYH9	ENSG00000100345.16	18910.61080	9763.40370	0.95360	60.07760	57.70890	HepG2	SRSF5
MYH9	ENSG00000100345.16	14509.85080	9481.73130	0.61370	36.35730	34.43000	HepG2	SLBP
MYH9	ENSG00000100345.16	12101.13760	7156.93770	0.75760	34.56880	32.85140	HepG2	TRIM56
MYH9	ENSG00000100345.16	21142.70080	9715.78210	1.12170	33.41080	31.67990	HepG2	CELF1
MYH9	ENSG00000100345.16	16134.27700	11103.39180	0.53900	24.57560	23.02100	HepG2	SUCLG1
MYH9	ENSG00000100345.16	11148.84960	16455.54050	-0.56170	23.32310	22.15430	HepG2	SSB
MYH9	ENSG00000100345.16	19450.84460	10749.15780	0.85550	21.49020	20.26390	HepG2	NELFE
MYH9	ENSG00000100345.16	8802.20820	13165.33800	-0.58080	21.20910	18.94380	HepG2	HDGF
MYH9	ENSG00000100345.16	8992.17350	13193.30220	-0.55310	20.19780	18.76020	HepG2	DKC1
MYH9	ENSG00000100345.16	21324.61400	13790.14390	0.62880	18.56570	17.29060	HepG2	ACO1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 147 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MYH9 is not available on ENCORE database.

3 RBPs can affect the splicing of MYH9 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MYH9	ENSG00000100345.16	chr22	-	36722068	36722186	36718473	36718566	36722612	36722706	0.06200	0.00000	0.00000	included	HepG2	U2AF1
SE	MYH9	ENSG00000100345.16	chr22	-	36722068	36722186	36718473	36718566	36722612	36722706	0.15300	0.00000	0.00000	included	HepG2	U2AF2
A3SS	MYH9	ENSG00000100345.16	chr22	-	36702459	36702697	36702459	36702653	36705326	36705441	0.07200	0.00000	0.00000	longer	HepG2	U2AF1
A3SS	MYH9	ENSG00000100345.16	chr22	-	36681910	36682024	36681910	36681999	36682763	36682892	0.06300	0.00015	0.00125	longer	K562	AQR
SE	MYH9	ENSG00000100345.16	chr22	-	36701556	36701799	36701078	36701148	36701975	36702097	0.22400	0.00633	0.08655	included	K562	U2AF2

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MYH9

General Information

Functions

Localization

Domains (AlphaFold: MYH9)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MYH9 is not avaliable on ENCORE database.

56 proteins are bound to MYH9 RNA:

eCLIP assay for MYH9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MYH9 is not available on ENCORE database.

123 RBPs can affect the gene expression of MYH9 :

The Knockdown/knockout RNA-Seq assay for MYH9 is not available on ENCORE database.

3 RBPs can affect the splicing of MYH9 :

The Knockdown/knockout RNA-Seq assay for MYH9 is not avaliable on ENCORE database.