MALT1

General Information

Gene Name : MALT1
Gene ID : ENSG00000172175.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MALT1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MALT1	ENSG00000172175.13	42.51	36.90	39.70	ENCSR000AEF
HepG2	MALT1	ENSG00000172175.13	17.44	29.44	23.44	ENCSR985KAT
K562	MALT1	ENSG00000172175.13	0.26	0.21	0.23	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MALT1 is not avaliable on ENCORE database.

Proteins bound to RNA

MALT1 RNA is bound by 17 proteins.

CanvasJS.com

eCLIP assay for MALT1 is not avaliable on ENCORE database.

17 proteins are bound to MALT1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr18	56338724	56338863	+	5'-UTR	4.17591	23.92760	HepG2	DDX3X
chr18	56402498	56402549	+	CDS	4.62052	23.78468	HepG2	BCLAF1
chr18	56402241	56402344	+	intron-Distal,intron-Proximal	5.84883	21.85889	HepG2	QKI
chr18	56386557	56386658	+	intron-Distal	4.84351	19.37190	HepG2	PTBP1
chr18	56339138	56339240	+	intron-Distal,intron-Proximal	5.87462	18.95541	HepG2	EFTUD2
chr18	56338873	56338979	+	5'-UTR,CDS	4.19566	18.03390	HepG2	DDX3X
chr18	56390361	56390433	+	CDS	4.24729	18.01246	HepG2	BCLAF1
chr18	56390433	56390483	+	CDS	3.72962	16.60646	HepG2	BCLAF1
chr18	56390278	56390361	+	CDS,intron-Proximal	3.09491	15.53994	HepG2	BCLAF1
chr18	56400626	56400664	+	CDS,intron-Proximal	4.13203	15.02931	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 72 entries

eCLIP assay for MALT1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MALT1 is not available on ENCORE database.
137 RBPs can affect the levels of MALT1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MALT1 is not available on ENCORE database.

137 RBPs can affect the gene expression of MALT1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MALT1	ENSG00000172175.8	596.45560	2198.82510	-1.88220	109.56730	106.58550	HepG2	HNRNPU
MALT1	ENSG00000172175.8	447.60420	2136.71370	-2.25510	105.62300	103.40960	HepG2	TIAL1
MALT1	ENSG00000172175.8	781.94410	2216.74670	-1.50330	81.49250	79.15430	HepG2	PUS1
MALT1	ENSG00000172175.8	943.81660	2873.25890	-1.60610	49.50930	47.63520	HepG2	PUM1
MALT1	ENSG00000172175.8	1213.57510	2283.59960	-0.91200	40.44320	38.50500	HepG2	SMN1
MALT1	ENSG00000172175.8	1128.31400	2175.87470	-0.94740	39.33470	37.50420	HepG2	CKAP4
MALT1	ENSG00000172175.8	714.24270	2304.36680	-1.68990	34.97550	33.36240	HepG2	AKAP1
MALT1	ENSG00000172175.8	480.54930	1373.47750	-1.51510	34.44650	32.75360	HepG2	BOP1
MALT1	ENSG00000172175.8	1259.41430	2246.03360	-0.83460	33.80480	31.62240	HepG2	ILF2
MALT1	ENSG00000172175.8	1060.26000	2082.17130	-0.97370	31.97280	30.32030	HepG2	DKC1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 139 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MALT1 is not available on ENCORE database.

17 RBPs can affect the splicing of MALT1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MALT1	ENSG00000172175.8	chr18	+	56378152	56378185			56377207	56377304	56381314	56381341	-0.40300	0.00000	0.00005	excluded	HepG2	U2AF2
SE	MALT1	ENSG00000172175.8	chr18	+	56378152	56378185			56377207	56377304	56381314	56381341	-0.38900	0.00000	0.00000	excluded	HepG2	SFPQ
SE	MALT1	ENSG00000172175.8	chr18	+	56406304	56406353			56402433	56402561	56409096	56409246	0.11800	0.00000	0.00024	included	HepG2	FTO
SE	MALT1	ENSG00000172175.8	chr18	+	56378152	56378185			56377207	56377304	56381314	56381341	-0.24800	0.00000	0.00006	excluded	HepG2	DDX6
SE	MALT1	ENSG00000172175.8	chr18	+	56378152	56378185			56377207	56377304	56381314	56381341	-0.66500	0.00000	0.00000	excluded	HepG2	RBFOX2
SE	MALT1	ENSG00000172175.8	chr18	+	56401113	56401212			56400628	56400806	56401538	56401613	0.20200	0.00000	0.00001	included	HepG2	HNRNPU
SE	MALT1	ENSG00000172175.8	chr18	+	56378152	56378185			56377207	56377304	56381314	56381341	-0.20100	0.00001	0.00042	excluded	HepG2	HNRNPK
MXE	MALT1	ENSG00000172175.8	chr18	+	56401538	56401613	56401682	56401798	56400628	56400806	56402433	56402561	-0.16900	0.00001	0.00072	2included	HepG2	HNRNPC
MXE	MALT1	ENSG00000172175.8	chr18	+	56401483	56401613	56401682	56401798	56400628	56400806	56402433	56402561	-0.21400	0.00002	0.00950	2included	HepG2	TIA1
SE	MALT1	ENSG00000172175.8	chr18	+	56378152	56378185			56377207	56377304	56381314	56381341	-0.17400	0.00003	0.00471	excluded	HepG2	HNRNPL

Showing 1 to 10 of 22 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MALT1

General Information

Functions

Localization

Domains (AlphaFold: MALT1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MALT1 is not avaliable on ENCORE database.

17 proteins are bound to MALT1 RNA:

eCLIP assay for MALT1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MALT1 is not available on ENCORE database.

137 RBPs can affect the gene expression of MALT1 :

The Knockdown/knockout RNA-Seq assay for MALT1 is not available on ENCORE database.

17 RBPs can affect the splicing of MALT1 :

The Knockdown/knockout RNA-Seq assay for MALT1 is not avaliable on ENCORE database.