LGALS8

General Information

Gene Name : LGALS8
Gene ID : ENSG00000116977.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: LGALS8)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	LGALS8	ENSG00000116977.18	13.63	13.88	13.76	ENCSR000AEF
HepG2	LGALS8	ENSG00000116977.18	40.82	64.95	52.89	ENCSR985KAT
K562	LGALS8	ENSG00000116977.18	50.12	53.70	51.91	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for LGALS8 is not avaliable on ENCORE database.

Proteins bound to RNA

LGALS8 RNA is bound by 19 proteins.

CanvasJS.com

eCLIP assay for LGALS8 is not avaliable on ENCORE database.

19 proteins are bound to LGALS8 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	236706012	236706070	+	3'-UTR,CDS,intron-Proximal	5.63308	27.21800	K562	SF3B4
chr1	236706816	236706867	+	CDS,intron-Proximal	4.19401	23.35685	HepG2	SF3A3
chr1	236706070	236706110	+	3'-UTR,CDS,intron-Proximal	5.10439	18.60679	K562	SF3B4
chr1	236702365	236702467	+	3'-UTR,CDS,intron-Proximal	5.90399	18.53372	HepG2	PRPF8
chr1	236702364	236702462	+	3'-UTR,CDS,intron-Proximal	5.06027	14.64978	K562	PRPF8
chr1	236706807	236706870	+	CDS,intron-Proximal	5.69872	13.06855	HepG2	SF3B4
chr1	236711309	236711393	+	CDS,intron-Proximal	3.26360	12.94085	HepG2	BCLAF1
chr1	236706021	236706128	+	3'-UTR,CDS,intron-Proximal	3.75833	10.58329	K562	EFTUD2
chr1	236708056	236708136	+	CDS	3.34203	10.35084	HepG2	BCLAF1
chr1	236706030	236706172	+	3'-UTR,CDS,intron-Proximal	4.94556	10.24966	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 44 entries

eCLIP assay for LGALS8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for LGALS8 is not available on ENCORE database.
139 RBPs can affect the levels of LGALS8.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for LGALS8 is not available on ENCORE database.

139 RBPs can affect the gene expression of LGALS8 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
LGALS8	ENSG00000116977.14	1757.24020	4643.76570	-1.40200	87.02020	85.06710	HepG2	NELFE
LGALS8	ENSG00000116977.14	1355.80610	3417.35250	-1.33370	76.04010	74.30080	HepG2	SSB
LGALS8	ENSG00000116977.14	1415.54130	3451.49630	-1.28590	71.94460	69.57990	HepG2	UTP3
LGALS8	ENSG00000116977.14	852.45660	2690.09770	-1.65800	68.78080	66.90950	HepG2	TIAL1
LGALS8	ENSG00000116977.14	2112.19850	4534.48350	-1.10220	62.49330	60.91500	HepG2	SRSF1
LGALS8	ENSG00000116977.14	777.65730	2548.83230	-1.71260	62.85920	60.62100	HepG2	RPS19
LGALS8	ENSG00000116977.14	766.53630	2505.48760	-1.70870	56.47200	54.34750	HepG2	HNRNPA1
LGALS8	ENSG00000116977.14	1495.89140	3484.67860	-1.22000	51.46810	49.78260	HepG2	RBM22
LGALS8	ENSG00000116977.14	1350.01650	4579.19800	-1.76210	50.54770	48.00170	HepG2	MAGOH
LGALS8	ENSG00000116977.14	1233.82280	4537.06760	-1.87860	48.87090	46.26650	HepG2	EIF4A3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 164 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for LGALS8 is not available on ENCORE database.

23 RBPs can affect the splicing of LGALS8 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	LGALS8	ENSG00000116977.14	chr1	+	236706214	236706340	236706060	236706087	236706859	236706948	-0.37200	0.00000	0.00000	excluded	HepG2	U2AF1
SE	LGALS8	ENSG00000116977.14	chr1	+	236688723	236688845	236687269	236687361	236689267	236689415	0.05200	0.00000	0.00009	included	K562	XRCC6
SE	LGALS8	ENSG00000116977.14	chr1	+	236703863	236703983	236702178	236702389	236706060	236706909	-0.14800	0.00000	0.00003	excluded	K562	AQR
SE	LGALS8	ENSG00000116977.14	chr1	+	236703863	236703983	236702178	236702389	236704953	236705010	-0.13900	0.00000	0.00014	excluded	K562	PUS1
SE	LGALS8	ENSG00000116977.14	chr1	+	236706214	236706340	236706060	236706087	236706859	236706948	-0.35300	0.00000	0.00001	excluded	K562	SRSF7
SE	LGALS8	ENSG00000116977.14	chr1	+	236688723	236688845	236687269	236687361	236689267	236689415	0.06000	0.00000	0.00015	included	HepG2	HNRNPC
SE	LGALS8	ENSG00000116977.14	chr1	+	236688723	236688845	236687269	236687361	236689267	236689415	0.20000	0.00000	0.00000	included	K562	HNRNPC
SE	LGALS8	ENSG00000116977.14	chr1	+	236706214	236706340	236706060	236706087	236706859	236706948	-0.30000	0.00001	0.00201	excluded	HepG2	SRSF7
SE	LGALS8	ENSG00000116977.14	chr1	+	236708461	236708593	236708049	236708215	236711311	236712302	0.05200	0.00001	0.00115	included	K562	HNRNPU
SE	LGALS8	ENSG00000116977.14	chr1	+	236703863	236703983	236702178	236702389	236704953	236705010	-0.17500	0.00002	0.00091	excluded	K562	SF3B4

Showing 1 to 10 of 31 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

LGALS8

General Information

Functions

Localization

Domains (AlphaFold: LGALS8)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for LGALS8 is not avaliable on ENCORE database.

19 proteins are bound to LGALS8 RNA:

eCLIP assay for LGALS8 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for LGALS8 is not available on ENCORE database.

139 RBPs can affect the gene expression of LGALS8 :

The Knockdown/knockout RNA-Seq assay for LGALS8 is not available on ENCORE database.

23 RBPs can affect the splicing of LGALS8 :

The Knockdown/knockout RNA-Seq assay for LGALS8 is not avaliable on ENCORE database.