CTD-2314B22.3

General Information

Gene Name : CTD-2314B22.3
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CTD-2314B22.3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CTD-2314B22.3 is not avaliable on ENCORE database.

Proteins bound to RNA

CTD-2314B22.3 RNA is bound by 30 proteins.

eCLIP assay for CTD-2314B22.3 is not avaliable on ENCORE database.

30 proteins are bound to CTD-2314B22.3 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr14	19888608	19888675	-	intron-Distal	3.02884	7.45803	HepG2	SFPQ
chr14	19890254	19890287	-	intron-Distal	3.50275	4.34872	K562	SLTM
chr14	19890668	19890725	-	intron-Distal	4.12967	4.86595	HepG2	CSTF2
chr14	19890343	19890363	-	intron-Distal	3.03210	7.74079	HepG2	SLTM
chr14	19889761	19889796	-	intron-Distal	3.42606	50.45943	HepG2	CSTF2T
chr14	19890305	19890343	-	intron-Distal	3.00599	13.01932	HepG2	SLTM
chr14	19889744	19889833	-	intron-Distal	4.89968	4.84473	K562	LSM11
chr14	19891012	19891088	-	intron-Distal,intron-Proximal	4.85823	8.22132	K562	FUS
chr14	19890968	19891005	-	intron-Distal,intron-Proximal	3.39972	3.92145	HepG2	TAF15
chr14	19889745	19889798	-	intron-Distal	4.07820	10.90782	K562	NONO
chr14	19889738	19889813	-	intron-Distal	3.33712	6.92561	K562	CSTF2T
chr14	19904613	19904664	-	intron-Distal	3.72101	4.74894	HepG2	HLTF
chr14	19890164	19890232	-	intron-Distal	3.96684	13.19417	HepG2	SLTM
chr14	19888132	19888196	-	intron-Distal	3.40589	18.03155	HepG2	CSTF2T
chr14	19890933	19891016	-	intron-Distal,intron-Proximal	4.47318	7.89119	K562	UPF1
chr14	19890843	19890883	-	intron-Distal	3.25860	6.38521	HepG2	SLTM
chr14	19888611	19888691	-	intron-Distal	3.36925	4.38394	K562	DROSHA
chr14	19889740	19889796	-	intron-Distal	4.51614	9.41677	HepG2	GTF2F1
chr14	19871937	19871983	-	intron-Distal	5.37482	8.42544	K562	PTBP1
chr14	19891044	19891107	-	intron-Distal,intron-Proximal	3.04593	11.02112	HepG2	IGF2BP1
chr14	19890946	19891012	-	intron-Distal,intron-Proximal	3.65665	5.42955	K562	FUS
chr14	19890299	19890362	-	intron-Distal	4.65372	4.98766	K562	EWSR1
chr14	19891018	19891100	-	intron-Distal,intron-Proximal	4.02966	6.68220	K562	TARDBP
chr14	19890070	19890110	-	intron-Distal	4.09010	3.27601	HepG2	RBM5
chr14	19891049	19891099	-	intron-Distal,intron-Proximal	3.28250	5.87304	HepG2	GTF2F1
chr14	19888135	19888195	-	intron-Distal	3.00147	7.51841	HepG2	XRN2
chr14	19888725	19888763	-	intron-Distal	3.80193	3.30664	K562	NONO
chr14	19861441	19861519	-	intron-Distal	3.06151	5.79030	HepG2	SUGP2
chr14	19861587	19861634	-	intron-Distal	3.36967	4.86332	HepG2	SUGP2
chr14	19871995	19872060	-	intron-Distal	4.24013	8.21761	HepG2	PTBP1
chr14	19861147	19861178	-	intron-Distal	3.97753	3.54208	HepG2	SUGP2
chr14	19878045	19878096	-	intron-Distal	3.22101	3.08145	HepG2	HLTF
chr14	19920521	19920610	-	intron-Distal	4.28813	8.25342	HepG2	HNRNPM
chr14	19886290	19886369	-	intron-Distal	4.10113	8.60427	HepG2	CSTF2
chr14	19889734	19889807	-	intron-Distal	3.33283	3.67625	K562	XRN2
chr14	19890238	19890295	-	intron-Distal	3.10748	6.77765	HepG2	DGCR8
chr14	19915994	19916079	-	intron-Distal	4.82067	5.33445	HepG2	HLTF
chr14	19891028	19891099	-	intron-Distal,intron-Proximal	4.10553	10.59710	K562	EIF4G2
chr14	19859299	19859347	-	intron-Distal	4.16021	8.31041	HepG2	SUGP2
chr14	19889222	19889259	-	intron-Distal	3.12915	3.88827	HepG2	SLTM
chr14	19890248	19890283	-	intron-Distal	3.00659	3.13903	HepG2	CSTF2
chr14	19888613	19888680	-	intron-Distal	4.62139	6.47842	K562	SLTM
chr14	19861329	19861343	-	intron-Distal	3.64647	6.79980	HepG2	SUGP2
chr14	19889718	19889765	-	intron-Distal	4.97519	46.37728	HepG2	SLTM
chr14	19889746	19889815	-	intron-Distal	3.33775	4.15366	K562	DROSHA
chr14	19890232	19890286	-	intron-Distal	3.40717	8.61041	HepG2	SLTM
chr14	19871967	19871981	-	intron-Distal	5.15570	11.56570	HepG2	PTBP1
chr14	19888612	19888692	-	intron-Distal	3.38784	10.50814	HepG2	CSTF2
chr14	19888711	19888795	-	intron-Distal	3.50965	6.45801	K562	XRN2
chr14	19888702	19888772	-	intron-Distal	4.03082	23.13568	HepG2	SLTM
chr14	19903477	19903559	-	intron-Distal	3.60883	5.74289	HepG2	HLTF
chr14	19859654	19859714	-	intron-Distal	4.86821	7.14375	HepG2	SUGP2
chr14	19888619	19888678	-	intron-Distal	3.88910	3.21586	K562	DDX52
chr14	19888617	19888681	-	intron-Distal	4.44047	21.44737	HepG2	SLTM
chr14	19888610	19888693	-	intron-Distal	3.03868	7.68696	HepG2	DROSHA
chr14	19890914	19890961	-	intron-Distal	3.29962	4.25110	K562	CSTF2T
chr14	19889808	19889851	-	intron-Distal	3.08219	4.14882	HepG2	FKBP4
chr14	19888887	19888935	-	intron-Distal	3.73087	3.17740	K562	CSTF2T
chr14	19890954	19890989	-	intron-Distal	3.87510	5.92215	HepG2	DROSHA
chr14	19889738	19889806	-	intron-Distal	3.19278	5.29946	K562	AATF
chr14	19863154	19863231	-	intron-Distal	3.18192	5.68399	HepG2	SUGP2
chr14	19890233	19890369	-	intron-Distal	3.93344	6.91543	K562	FUS
chr14	19890570	19890665	-	intron-Distal	3.36812	4.31701	K562	FUS
chr14	19890081	19890125	-	intron-Distal	3.01230	3.07097	K562	SLTM
chr14	19888612	19888703	-	intron-Distal	3.01900	19.45388	HepG2	NKRF
chr14	19861308	19861329	-	intron-Distal	3.16473	5.36060	HepG2	SUGP2
chr14	19889798	19889827	-	intron-Distal	3.22593	3.77567	K562	NONO
chr14	19886546	19886624	-	intron-Distal	3.91002	3.60521	K562	FUS
chr14	19890293	19890367	-	intron-Distal	3.22286	6.62472	K562	DROSHA
chr14	19861343	19861389	-	intron-Distal	3.17942	6.05827	HepG2	SUGP2
chr14	19889721	19889761	-	intron-Distal	3.44804	40.78709	HepG2	CSTF2T
chr14	19888133	19888192	-	intron-Distal	4.18727	13.21996	HepG2	SLTM
chr14	19889218	19889263	-	intron-Distal	3.43585	3.40562	HepG2	SRSF9
chr14	19890176	19890239	-	intron-Distal	3.69896	14.41283	HepG2	XRN2
chr14	19890227	19890285	-	intron-Distal	3.53054	21.26026	HepG2	CSTF2T
chr14	19889765	19889836	-	intron-Distal	4.26507	40.14762	HepG2	SLTM
chr14	19888769	19888818	-	intron-Distal	3.66794	5.06168	K562	SLTM
chr14	19888711	19888773	-	intron-Distal	3.31652	4.49566	K562	FUS
chr14	19890920	19891020	-	intron-Distal,intron-Proximal	3.80554	5.77244	K562	UCHL5
chr14	19889796	19889833	-	intron-Distal	3.58736	22.62401	HepG2	CSTF2T
chr14	19888772	19888817	-	intron-Distal	4.06198	10.69925	HepG2	SLTM
chr14	19888779	19888818	-	intron-Distal	4.17999	3.05053	K562	DROSHA
chr14	19889752	19889799	-	intron-Distal	3.40942	3.45982	K562	DDX52
chr14	19915865	19915933	-	intron-Distal	3.33854	9.91797	HepG2	HLTF
chr14	19891016	19891089	-	intron-Distal,intron-Proximal	3.37141	5.78757	K562	UPF1
chr14	19859433	19859505	-	intron-Distal	3.99973	6.26907	HepG2	SUGP2
chr14	19890923	19891013	-	intron-Distal,intron-Proximal	3.44613	11.04384	HepG2	CDC40
chr14	19890576	19890632	-	intron-Distal	3.79788	6.15336	K562	SLTM
chr14	19871936	19871967	-	intron-Distal	5.23701	12.58145	HepG2	PTBP1
chr14	19888611	19888685	-	intron-Distal	3.05546	9.80452	HepG2	FAM120A
chr14	19920464	19920523	-	intron-Distal	3.22019	6.35394	HepG2	SUGP2
chr14	19891013	19891078	-	intron-Distal,intron-Proximal	4.61722	14.67781	HepG2	CDC40
chr14	19889718	19889829	-	intron-Distal	5.34207	18.96596	K562	SLTM
chr14	19889727	19889825	-	intron-Distal	3.14343	23.75235	HepG2	XRN2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CTD-2314B22.3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CTD-2314B22.3 is not available on ENCORE database.
69 RBPs can affect the levels of CTD-2314B22.3.

The Knockdown/knockout RNA-Seq assay for CTD-2314B22.3 is not available on ENCORE database.

69 RBPs can affect the gene expression of CTD-2314B22.3 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CTD-2314B22.3	ENSG00000244306.5	2335.32940	1687.54130	0.46860	8.53070	7.58340	HepG2	ACO1
CTD-2314B22.3	ENSG00000244306.5	3456.91640	1839.89740	0.90980	18.86670	17.51060	HepG2	BOP1
CTD-2314B22.3	ENSG00000244306.5	2199.08930	1689.13460	0.38050	3.54500	2.77710	HepG2	CPSF6
CTD-2314B22.3	ENSG00000244306.5	1446.07610	1745.06840	-0.27110	2.85320	1.67640	HepG2	DDX1
CTD-2314B22.3	ENSG00000244306.5	1265.61850	1590.04980	-0.32920	2.70620	2.03500	HepG2	DDX21
CTD-2314B22.3	ENSG00000244306.5	1076.44790	1684.20670	-0.64580	6.09070	5.20300	HepG2	DDX6
CTD-2314B22.3	ENSG00000244306.5	1371.71910	1614.51140	-0.23510	2.40000	1.76170	HepG2	DKC1
CTD-2314B22.3	ENSG00000244306.5	1238.94900	1711.16620	-0.46590	7.15880	6.07040	HepG2	DNAJC21
CTD-2314B22.3	ENSG00000244306.5	1475.36240	1695.92700	-0.20100	2.33520	1.72600	HepG2	DNAJC2
CTD-2314B22.3	ENSG00000244306.5	1263.61770	1706.99960	-0.43390	2.38480	1.52610	HepG2	EEF2
CTD-2314B22.3	ENSG00000244306.5	3110.29140	1742.06460	0.83620	6.01430	5.02890	HepG2	EIF4B
CTD-2314B22.3	ENSG00000244306.5	2072.98470	2465.87460	-0.25040	3.36280	2.45570	HepG2	EIF4G1
CTD-2314B22.3	ENSG00000244306.5	3698.67230	2947.10070	0.32760	6.13320	5.29820	HepG2	ETF1
CTD-2314B22.3	ENSG00000244306.5	3553.31400	2144.45020	0.72850	8.55840	7.29080	HepG2	FIP1L1
CTD-2314B22.3	ENSG00000244306.5	1061.21610	1692.01200	-0.67300	2.67450	1.67570	HepG2	FTO
CTD-2314B22.3	ENSG00000244306.5	1458.66290	987.81150	0.56220	6.61110	5.42530	HepG2	FUBP3
CTD-2314B22.3	ENSG00000244306.5	1287.04840	1914.78910	-0.57310	5.38550	4.51170	HepG2	GPKOW
CTD-2314B22.3	ENSG00000244306.5	1297.78920	1727.55820	-0.41270	4.18740	3.41480	HepG2	HNRNPA1
CTD-2314B22.3	ENSG00000244306.5	1330.14860	1860.49640	-0.48410	3.14580	1.53010	HepG2	HNRNPD
CTD-2314B22.3	ENSG00000244306.5	1683.42200	2030.63430	-0.27050	2.51090	1.82050	HepG2	IGF2BP1
CTD-2314B22.3	ENSG00000244306.5	2571.19530	1597.50290	0.68650	2.65390	1.69170	HepG2	IGF2BP3
CTD-2314B22.3	ENSG00000244306.5	2222.18580	1949.82960	0.18850	2.39710	1.70830	HepG2	ILF2
CTD-2314B22.3	ENSG00000244306.5	1530.18060	2093.83770	-0.45240	2.64870	1.36420	HepG2	ILF3
CTD-2314B22.3	ENSG00000244306.5	1487.66370	2045.52930	-0.45940	3.26670	1.94740	HepG2	KHDRBS1
CTD-2314B22.3	ENSG00000244306.5	1415.55450	1858.77530	-0.39300	2.85840	2.21550	HepG2	NCBP2
CTD-2314B22.3	ENSG00000244306.5	1211.09860	1620.24840	-0.41990	3.64180	2.78440	HepG2	NSUN2
CTD-2314B22.3	ENSG00000244306.5	1349.06240	1962.88550	-0.54100	2.84340	1.94050	HepG2	PABPC1
CTD-2314B22.3	ENSG00000244306.5	2766.93000	1889.48360	0.55020	13.12350	11.50700	HepG2	PARN
CTD-2314B22.3	ENSG00000244306.5	2359.35880	1639.91960	0.52470	11.55340	10.45190	HepG2	PCBP1
CTD-2314B22.3	ENSG00000244306.5	1330.22850	1702.54500	-0.35600	4.41870	3.50730	HepG2	PPIL4
CTD-2314B22.3	ENSG00000244306.5	1557.65590	2366.04590	-0.60310	9.26760	8.26360	HepG2	PUF60
CTD-2314B22.3	ENSG00000244306.5	1899.48770	2509.79410	-0.40200	5.55990	4.62300	HepG2	PUM2
CTD-2314B22.3	ENSG00000244306.5	1321.97470	1718.86560	-0.37880	6.24080	5.38210	HepG2	PUS1
CTD-2314B22.3	ENSG00000244306.5	6833.49940	2463.22690	1.47200	88.97160	86.84140	HepG2	RBM22
CTD-2314B22.3	ENSG00000244306.5	1705.88660	1086.32850	0.65100	6.56670	5.41140	HepG2	RRP9
CTD-2314B22.3	ENSG00000244306.5	1483.70090	2159.76250	-0.54170	4.12670	3.29480	HepG2	SF3A3
CTD-2314B22.3	ENSG00000244306.5	2015.61730	1737.32170	0.21430	2.22700	1.68900	HepG2	SF3B4
CTD-2314B22.3	ENSG00000244306.5	5382.05920	2782.11720	0.95190	53.45640	51.98120	HepG2	SRFBP1
CTD-2314B22.3	ENSG00000244306.5	1745.95380	1475.26970	0.24290	2.83660	2.27950	HepG2	SRSF9
CTD-2314B22.3	ENSG00000244306.5	1742.15800	2415.52430	-0.47150	10.18780	9.32300	HepG2	SSB
CTD-2314B22.3	ENSG00000244306.5	1276.56530	1781.00550	-0.48040	4.94490	4.01620	HepG2	TARDBP
CTD-2314B22.3	ENSG00000244306.5	1460.01490	1854.96050	-0.34540	3.89120	3.31960	HepG2	TIAL1
CTD-2314B22.3	ENSG00000244306.5	1203.86170	837.09040	0.52410	4.78260	3.77920	HepG2	UCHL5
CTD-2314B22.3	ENSG00000244306.5	1542.57590	1915.37590	-0.31230	4.66240	3.79430	HepG2	UPF1
CTD-2314B22.3	ENSG00000244306.5	1410.89550	1747.15340	-0.30840	4.63220	3.79980	HepG2	ZC3H8
CTD-2314B22.3	ENSG00000244306.5	1609.60530	2106.55150	-0.38820	8.28880	7.47370	HepG2	ZNF622
CTD-2314B22.3	ENSG00000244306.5	576.91740	407.41220	0.50180	3.58810	2.22530	K562	AARS
CTD-2314B22.3	ENSG00000244306.5	717.43590	1040.43510	-0.53630	4.88610	3.24010	K562	ABCF1
CTD-2314B22.3	ENSG00000244306.5	324.43860	509.73760	-0.65180	5.29330	4.54950	K562	AGGF1
CTD-2314B22.3	ENSG00000244306.5	392.91830	560.05720	-0.51130	4.00560	2.77620	K562	AKAP8
CTD-2314B22.3	ENSG00000244306.5	400.57780	530.38850	-0.40500	2.55960	1.93040	K562	AKAP8L
CTD-2314B22.3	ENSG00000244306.5	494.24110	677.44590	-0.45490	1.89060	1.38820	K562	AQR
CTD-2314B22.3	ENSG00000244306.5	398.78040	649.45760	-0.70360	5.93960	4.64990	K562	BOP1
CTD-2314B22.3	ENSG00000244306.5	1070.72970	805.09600	0.41130	2.96360	1.81560	K562	CPEB4
CTD-2314B22.3	ENSG00000244306.5	266.02210	496.85990	-0.90130	6.67960	4.68670	K562	EEF2
CTD-2314B22.3	ENSG00000244306.5	359.15850	480.09930	-0.41870	2.32910	1.49230	K562	EFTUD2
CTD-2314B22.3	ENSG00000244306.5	346.57670	514.09990	-0.56890	3.18620	2.07060	K562	EIF3D
CTD-2314B22.3	ENSG00000244306.5	1189.02820	903.35480	0.39630	2.73840	1.80470	K562	EIF4G2
CTD-2314B22.3	ENSG00000244306.5	447.14490	595.63520	-0.41370	2.34940	1.51200	K562	FTO
CTD-2314B22.3	ENSG00000244306.5	522.62370	337.74670	0.62970	5.76980	4.94270	K562	FXR1
CTD-2314B22.3	ENSG00000244306.5	586.40520	445.71060	0.39570	2.48760	1.91780	K562	HNRNPC
CTD-2314B22.3	ENSG00000244306.5	293.56670	615.18370	-1.06730	10.72190	8.60390	K562	HNRNPM
CTD-2314B22.3	ENSG00000244306.5	1271.72180	962.95470	0.40110	2.96370	1.79070	K562	MSI2
CTD-2314B22.3	ENSG00000244306.5	254.17650	417.95530	-0.71750	2.61820	1.66210	K562	PABPN1
CTD-2314B22.3	ENSG00000244306.5	557.75070	423.04370	0.39870	2.77030	1.42070	K562	PCBP1
CTD-2314B22.3	ENSG00000244306.5	566.16370	385.11580	0.55580	3.70660	2.57570	K562	PCBP2
CTD-2314B22.3	ENSG00000244306.5	653.28830	849.04990	-0.37810	2.66390	1.86290	K562	PPIG
CTD-2314B22.3	ENSG00000244306.5	591.41050	420.50530	0.49190	4.07210	3.28140	K562	PTBP1
CTD-2314B22.3	ENSG00000244306.5	870.70050	587.05570	0.56860	3.84600	1.68250	K562	SAFB2
CTD-2314B22.3	ENSG00000244306.5	744.07860	561.44630	0.40620	3.25530	2.36500	K562	SYNCRIP
CTD-2314B22.3	ENSG00000244306.5	533.95800	408.40400	0.38660	2.17100	1.34820	K562	TRIM56
CTD-2314B22.3	ENSG00000244306.5	270.20650	412.72790	-0.61110	3.41150	2.52150	K562	U2AF2
CTD-2314B22.3	ENSG00000244306.5	1047.30730	802.39210	0.38420	2.92570	1.59410	K562	WRN
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CTD-2314B22.3 is not available on ENCORE database.

2 RBPs can affect the splicing of CTD-2314B22.3 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	CTD-2314B22.3	ENSG00000244306.5	chr14	-	19923012	19923123			19921590	19921738	19925239	19925346	0.49200	0.00005	0.01047	included	HepG2	PCBP2
SE	CTD-2314B22.3	ENSG00000244306.5	chr14	-	19891876	19892052			19854097	19857070	19894699	19894794	-0.06800	0.00261	0.08784	excluded	HepG2	HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CTD-2314B22.3

General Information

Functions

Localization

Domains (AlphaFold: CTD-2314B22.3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CTD-2314B22.3 is not avaliable on ENCORE database.

30 proteins are bound to CTD-2314B22.3 RNA:

eCLIP assay for CTD-2314B22.3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CTD-2314B22.3 is not available on ENCORE database.

69 RBPs can affect the gene expression of CTD-2314B22.3 :

The Knockdown/knockout RNA-Seq assay for CTD-2314B22.3 is not available on ENCORE database.

2 RBPs can affect the splicing of CTD-2314B22.3 :

The Knockdown/knockout RNA-Seq assay for CTD-2314B22.3 is not avaliable on ENCORE database.