URGCP-MRPS24

General Information

Gene Name : URGCP-MRPS24
Gene ID : ENSG00000270617.1
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: URGCP-MRPS24)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Average TPM	Experiment ID
Gm12878	URGCP-MRPS24	ENSG00000270617.1	0.00	0.00	ENCSR000AEF
HepG2	URGCP-MRPS24	ENSG00000270617.1	0.00	0.00	ENCSR985KAT
K562	URGCP-MRPS24	ENSG00000270617.1	0.41	0.20	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for URGCP-MRPS24 is not avaliable on ENCORE database.

Proteins bound to RNA

URGCP-MRPS24 RNA is bound by 24 proteins.

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eCLIP assay for URGCP-MRPS24 is not avaliable on ENCORE database.

24 proteins are bound to URGCP-MRPS24 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	43941599	43941754	-	intron-Distal	6.30274	56.61401	HepG2	PCBP2
chr7	43908919	43908975	-	5'-UTR,CDS,intron-Distal	6.13065	28.29077	HepG2	DDX3X
chr7	43909053	43909099	-	5'-UTR,CDS,intron-Distal,intron-Proximal	6.87743	28.13197	HepG2	DDX3X
chr7	43906258	43906354	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.08732	26.17131	K562	PUM2
chr7	43909054	43909105	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.34111	23.44921	K562	DDX3X
chr7	43908927	43908976	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.17120	18.47713	K562	DDX3X
chr7	43906310	43906369	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.21241	13.33740	HepG2	LARP4
chr7	43906236	43906310	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.59194	13.09540	HepG2	LARP4
chr7	43906181	43906236	-	3'-UTR,intron-Distal	4.21795	11.06468	HepG2	LARP4
chr7	43908906	43908976	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.57243	10.82619	HepG2	RPS3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 51 entries

eCLIP assay for URGCP-MRPS24 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for URGCP-MRPS24 is not available on ENCORE database.
18 RBPs can affect the levels of URGCP-MRPS24.

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The Knockdown/knockout RNA-Seq assay for URGCP-MRPS24 is not available on ENCORE database.

18 RBPs can affect the gene expression of URGCP-MRPS24 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
URGCP-MRPS24	ENSG00000270617.1	18.40700	0.00000	99999.99990	3.90790	2.93430	K562	RPS19
URGCP-MRPS24	ENSG00000270617.1	0.00000	12.98650	-99999.99999	3.82770	2.77490	K562	DKC1
URGCP-MRPS24	ENSG00000270617.1	0.00000	12.80800	-99999.99999	3.59290	2.63790	K562	KIF1C
URGCP-MRPS24	ENSG00000270617.1	13.10980	0.00000	99999.99990	3.33330	2.50740	K562	PRPF8
URGCP-MRPS24	ENSG00000270617.1	0.00000	11.66220	-99999.99999	3.07150	2.45230	K562	RBM15
URGCP-MRPS24	ENSG00000270617.1	11.07250	0.00000	99999.99990	3.05680	2.23340	HepG2	FUBP3
URGCP-MRPS24	ENSG00000270617.1	9.51910	0.00000	99999.99990	2.65710	2.03010	HepG2	EIF4A3
URGCP-MRPS24	ENSG00000270617.1	9.69380	0.00000	99999.99990	2.60090	2.00150	HepG2	DDX6
URGCP-MRPS24	ENSG00000270617.1	15.73240	0.00000	99999.99990	3.50040	1.93120	HepG2	SF1
URGCP-MRPS24	ENSG00000270617.1	7.42410	0.00000	99999.99990	2.50280	1.83090	HepG2	SLBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 18 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for URGCP-MRPS24 is not available on ENCORE database.

2 RBPs can affect the splicing of URGCP-MRPS24 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	URGCP-MRPS24	ENSG00000270617.1	chr7	-	43927388	43927415			43927013	43927084	43946160	43946188	-0.50700	0.00003	0.00303	excluded	HepG2	SF3B4
SE	URGCP-MRPS24	ENSG00000270617.1	chr7	-	43927388	43927415			43927013	43927084	43946160	43946188	-0.38300	0.00037	0.01759	excluded	K562	HNRNPU

Showing 1 to 2 of 2 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

URGCP-MRPS24

General Information

Functions

Localization

Domains (AlphaFold: URGCP-MRPS24)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for URGCP-MRPS24 is not avaliable on ENCORE database.

24 proteins are bound to URGCP-MRPS24 RNA:

eCLIP assay for URGCP-MRPS24 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for URGCP-MRPS24 is not available on ENCORE database.

18 RBPs can affect the gene expression of URGCP-MRPS24 :

The Knockdown/knockout RNA-Seq assay for URGCP-MRPS24 is not available on ENCORE database.

2 RBPs can affect the splicing of URGCP-MRPS24 :

The Knockdown/knockout RNA-Seq assay for URGCP-MRPS24 is not avaliable on ENCORE database.