URGCP-MRPS24

General Information

Gene Name : URGCP-MRPS24
Gene ID : ENSG00000270617.1
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: URGCP-MRPS24)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Average TPM	Experiment ID
Gm12878	URGCP-MRPS24	ENSG00000270617.1	0.00	0.00	ENCSR000AEF
HepG2	URGCP-MRPS24	ENSG00000270617.1	0.00	0.00	ENCSR985KAT
K562	URGCP-MRPS24	ENSG00000270617.1	0.41	0.20	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for URGCP-MRPS24 is not avaliable on ENCORE database.

Proteins bound to RNA

URGCP-MRPS24 RNA is bound by 24 proteins.

eCLIP assay for URGCP-MRPS24 is not avaliable on ENCORE database.

24 proteins are bound to URGCP-MRPS24 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	43906181	43906236	-	3'-UTR,intron-Distal	4.21795	11.06468	HepG2	LARP4
chr7	43906310	43906369	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.21241	13.33740	HepG2	LARP4
chr7	43906416	43906545	-	3'-UTR,CDS,intron-Distal	4.02047	4.67506	HepG2	DDX55
chr7	43906420	43906463	-	3'-UTR,CDS,intron-Distal	4.51079	10.68247	K562	PABPC4
chr7	43906236	43906310	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.59194	13.09540	HepG2	LARP4
chr7	43906385	43906454	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.78461	10.60800	HepG2	LARP4
chr7	43906174	43906242	-	3'-UTR,intron-Distal	6.34982	10.19274	K562	PABPC4
chr7	43906258	43906354	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.08732	26.17131	K562	PUM2
chr7	43946115	43946179	-	5'-UTR,CDS,intron-Distal	3.82658	5.73990	HepG2	PRPF8
chr7	43908909	43908921	-	5'-UTR,CDS,intron-Distal	4.07506	7.73893	K562	DDX3X
chr7	43908614	43908643	-	3'-UTR,5'-UTR,CDS,intron-Distal	3.46150	5.97131	K562	DDX3X
chr7	43908927	43908976	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.17120	18.47713	K562	DDX3X
chr7	43908935	43908955	-	5'-UTR,CDS,intron-Distal	3.14824	4.22050	HepG2	LARP4
chr7	43908919	43908975	-	5'-UTR,CDS,intron-Distal	6.13065	28.29077	HepG2	DDX3X
chr7	43908653	43908674	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.67508	7.18289	K562	YBX3
chr7	43908643	43908673	-	3'-UTR,5'-UTR,CDS,intron-Distal	4.03172	10.05151	K562	DDX3X
chr7	43926952	43927038	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.12747	5.34978	HepG2	PRPF8
chr7	43908602	43908653	-	3'-UTR,5'-UTR,CDS,intron-Distal	4.12449	6.57313	K562	PABPC4
chr7	43921181	43921314	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.36955	6.48405	K562	AQR
chr7	43927047	43927093	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.09811	3.35169	HepG2	U2AF2
chr7	43908955	43908976	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.91993	4.63830	HepG2	LARP4
chr7	43908906	43908909	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.99442	6.73521	K562	DDX3X
chr7	43908906	43908976	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.57243	10.82619	HepG2	RPS3
chr7	43941599	43941754	-	intron-Distal	6.30274	56.61401	HepG2	PCBP2
chr7	43915871	43915998	-	3'-UTR,intron-Distal,intron-Proximal	3.59806	5.09017	HepG2	UPF1
chr7	43915845	43916017	-	3'-UTR,intron-Distal,intron-Proximal	4.70360	5.58306	HepG2	AKAP1
chr7	43945777	43945929	-	intron-Distal,intron-Proximal	3.92234	7.90441	HepG2	XRN2
chr7	43916189	43916255	-	3'-UTR,intron-Distal	4.31063	3.87930	K562	UPF1
chr7	43935754	43935804	-	intron-Distal	4.97871	5.77028	HepG2	PCBP2
chr7	43909053	43909099	-	5'-UTR,CDS,intron-Distal,intron-Proximal	6.87743	28.13197	HepG2	DDX3X
chr7	43909054	43909105	-	5'-UTR,CDS,intron-Distal,intron-Proximal	5.34111	23.44921	K562	DDX3X
chr7	43915667	43915750	-	3'-UTR,intron-Distal	3.05673	4.14964	K562	UPF1
chr7	43915769	43915883	-	3'-UTR,intron-Distal	4.87685	5.94928	K562	UPF1
chr7	43941615	43941730	-	intron-Distal	3.60535	7.09496	K562	ILF3
chr7	43941618	43941744	-	intron-Distal	3.62582	7.95978	HepG2	PTBP1
chr7	43927367	43927426	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.15831	4.75425	K562	EFTUD2
chr7	43933786	43933919	-	intron-Distal	4.20730	8.98664	K562	KHSRP
chr7	43941840	43941920	-	intron-Distal	4.38233	4.75225	K562	ILF3
chr7	43917304	43917376	-	CDS,intron-Distal	5.04747	5.26450	HepG2	EIF3H
chr7	43941754	43941796	-	intron-Distal	3.56545	5.19200	HepG2	PCBP2
chr7	43915536	43915628	-	3'-UTR,intron-Distal	5.42061	10.24308	K562	PUM2
chr7	43938269	43938346	-	intron-Distal	3.88143	3.82697	HepG2	HNRNPC
chr7	43945824	43945955	-	intron-Distal,intron-Proximal	3.03471	8.03523	HepG2	NKRF
chr7	43909055	43909089	-	CDS,intron-Distal,intron-Proximal	3.57545	3.01032	HepG2	LARP4
chr7	43937697	43937770	-	intron-Distal	4.99565	5.02084	HepG2	HNRNPM
chr7	43934000	43934086	-	intron-Distal	4.63253	4.36866	HepG2	ILF3
chr7	43941620	43941745	-	intron-Distal	4.10851	3.89149	HepG2	HNRNPK
chr7	43945772	43945824	-	intron-Distal	3.90097	5.34741	HepG2	NKRF
chr7	43936893	43936957	-	intron-Distal	4.63634	3.30440	HepG2	QKI
chr7	43934157	43934211	-	intron-Distal	4.30154	4.38124	HepG2	ILF3
chr7	43945806	43945912	-	intron-Distal,intron-Proximal	3.97194	9.56233	HepG2	EFTUD2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for URGCP-MRPS24 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for URGCP-MRPS24 is not available on ENCORE database.
18 RBPs can affect the levels of URGCP-MRPS24.

The Knockdown/knockout RNA-Seq assay for URGCP-MRPS24 is not available on ENCORE database.

18 RBPs can affect the gene expression of URGCP-MRPS24 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
URGCP-MRPS24	ENSG00000270617.1	9.69380	0.00000	99999.99990	2.60090	2.00150	HepG2	DDX6
URGCP-MRPS24	ENSG00000270617.1	9.51910	0.00000	99999.99990	2.65710	2.03010	HepG2	EIF4A3
URGCP-MRPS24	ENSG00000270617.1	11.07250	0.00000	99999.99990	3.05680	2.23340	HepG2	FUBP3
URGCP-MRPS24	ENSG00000270617.1	8.93130	0.00000	99999.99990	2.09490	1.48130	HepG2	HNRNPK
URGCP-MRPS24	ENSG00000270617.1	0.00000	8.46340	-99999.99999	2.11900	1.43410	HepG2	PRPF4
URGCP-MRPS24	ENSG00000270617.1	15.73240	0.00000	99999.99990	3.50040	1.93120	HepG2	SF1
URGCP-MRPS24	ENSG00000270617.1	13.89180	2.98540	2.21810	1.79810	1.30400	HepG2	SF3B4
URGCP-MRPS24	ENSG00000270617.1	7.42410	0.00000	99999.99990	2.50280	1.83090	HepG2	SLBP
URGCP-MRPS24	ENSG00000270617.1	0.00000	8.34900	-99999.99999	2.10250	1.50480	HepG2	ZC3H8
URGCP-MRPS24	ENSG00000270617.1	1.78040	12.66370	-2.83040	2.10530	1.31620	K562	ATP5C1
URGCP-MRPS24	ENSG00000270617.1	0.00000	12.98650	-99999.99999	3.82770	2.77490	K562	DKC1
URGCP-MRPS24	ENSG00000270617.1	0.00000	12.80800	-99999.99999	3.59290	2.63790	K562	KIF1C
URGCP-MRPS24	ENSG00000270617.1	0.00000	10.05710	-99999.99999	2.20400	1.43700	K562	NAA15
URGCP-MRPS24	ENSG00000270617.1	13.10980	0.00000	99999.99990	3.33330	2.50740	K562	PRPF8
URGCP-MRPS24	ENSG00000270617.1	7.92570	0.00000	99999.99990	2.42370	1.79560	K562	PTBP1
URGCP-MRPS24	ENSG00000270617.1	0.00000	11.66220	-99999.99999	3.07150	2.45230	K562	RBM15
URGCP-MRPS24	ENSG00000270617.1	18.40700	0.00000	99999.99990	3.90790	2.93430	K562	RPS19
URGCP-MRPS24	ENSG00000270617.1	7.19510	0.00000	99999.99990	2.02770	1.41190	K562	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for URGCP-MRPS24 is not available on ENCORE database.

2 RBPs can affect the splicing of URGCP-MRPS24 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	URGCP-MRPS24	ENSG00000270617.1	chr7	-	43927388	43927415			43927013	43927084	43946160	43946188	-0.50700	0.00003	0.00303	excluded	HepG2	SF3B4
SE	URGCP-MRPS24	ENSG00000270617.1	chr7	-	43927388	43927415			43927013	43927084	43946160	43946188	-0.38300	0.00037	0.01759	excluded	K562	HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

URGCP-MRPS24

General Information

Functions

Localization

Domains (AlphaFold: URGCP-MRPS24)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for URGCP-MRPS24 is not avaliable on ENCORE database.

24 proteins are bound to URGCP-MRPS24 RNA:

eCLIP assay for URGCP-MRPS24 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for URGCP-MRPS24 is not available on ENCORE database.

18 RBPs can affect the gene expression of URGCP-MRPS24 :

The Knockdown/knockout RNA-Seq assay for URGCP-MRPS24 is not available on ENCORE database.

2 RBPs can affect the splicing of URGCP-MRPS24 :

The Knockdown/knockout RNA-Seq assay for URGCP-MRPS24 is not avaliable on ENCORE database.