TRADD

General Information

Gene Name       : TRADD
Gene ID             : ENSG00000102871.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TRADD)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRADDENSG00000102871.152.283.062.67ENCSR000AEF
HepG2TRADDENSG00000102871.153.611.482.54ENCSR985KAT
K562TRADDENSG00000102871.153.782.022.90ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRADD is not avaliable on ENCORE database.



Proteins bound to RNA
  • TRADD RNA is bound by 8 proteins.  







eCLIP assay for TRADD is not avaliable on ENCORE database.





8 proteins are bound to TRADD RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr166719054067190617-3'-UTR,CDS,intron-Distal,intron-Proximal4.115487.11359K562CSTF2T
chr166719056267190654-3'-UTR,CDS,intron-Distal,intron-Proximal3.151933.92899HepG2PRPF4
chr166719054767190664-3'-UTR,CDS,intron-Distal,intron-Proximal4.687573.48173K562GTF2F1
chr166718976467189822-5'-UTR,intron-Distal4.097003.15006K562RBM15
chr166719363067193732-intron-Distal3.072003.68924HepG2PRPF4
chr166719365167193718-intron-Distal4.424145.01722K562CSTF2T
chr166719363767193711-intron-Distal4.124695.72723HepG2EFTUD2
chr166719353467193593-intron-Distal4.045393.12843K562PRPF8
chr166719094667191054-intron-Distal3.345033.64784K562EWSR1
chr166719328367193361-intron-Distal3.285243.67595K562EWSR1
chr166719363767193681-intron-Distal3.102383.61506K562NONO
chr166719342867193500-intron-Distal3.263573.50009K562CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TRADD is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRADD is not available on ENCORE database.

  • 26 RBPs can affect the levels of TRADD.  








The Knockdown/knockout RNA-Seq assay for TRADD is not available on ENCORE database.





26 RBPs can affect the gene expression of TRADD :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRADDENSG00000102871.11248.14050159.509300.637403.332202.67450HepG2ACO1
TRADDENSG00000102871.11255.87350162.720500.652902.589702.07400HepG2AKAP1
TRADDENSG00000102871.11171.9138099.525200.788503.223602.10390HepG2AKAP8
TRADDENSG00000102871.11219.06530160.247400.451002.025401.35600HepG2AKAP8L
TRADDENSG00000102871.11266.59230155.861800.774303.925403.19150HepG2DDX3X
TRADDENSG00000102871.11168.85980107.690800.648802.091201.40970HepG2DDX55
TRADDENSG00000102871.11261.11730128.709401.020506.108305.24650HepG2EIF2S1
TRADDENSG00000102871.1184.82290138.50240-0.707401.927601.34690HepG2EIF4B
TRADDENSG00000102871.1166.75210153.67880-1.203006.034505.16180HepG2QKI
TRADDENSG00000102871.1155.02400154.19840-1.486708.052407.34240HepG2SRSF1
TRADDENSG00000102871.11138.6704090.098200.622002.182501.34200HepG2SUPT6H
TRADDENSG00000102871.1154.00920138.59180-1.359606.970406.14940HepG2TAF15
TRADDENSG00000102871.11128.4690074.003600.795702.887202.37850HepG2TIAL1
TRADDENSG00000102871.11129.7247078.731800.720302.773302.07240HepG2UPF1
TRADDENSG00000102871.11232.6876086.589201.4260013.4682012.48920HepG2ZNF622
TRADDENSG00000102871.11172.84060121.618800.507001.983601.42870K562AKAP8L
TRADDENSG00000102871.11138.0572077.687700.829403.253601.84940K562CIRBP
TRADDENSG00000102871.11245.16840115.157901.090108.228907.08820K562EIF2S2
TRADDENSG00000102871.1196.4883052.710200.872202.688201.85210K562FIP1L1
TRADDENSG00000102871.1115.5047050.36900-1.699802.692201.99700K562G3BP2
TRADDENSG00000102871.1149.53440100.21030-1.016503.886301.64940K562HNRNPH1
TRADDENSG00000102871.11130.1897071.453000.865403.133602.28870K562HSPD1
TRADDENSG00000102871.11105.7339059.847700.821002.708401.89830K562PPIG
TRADDENSG00000102871.1181.5103043.161400.917102.396801.47900K562RCC2
TRADDENSG00000102871.1132.2296072.55850-1.170803.164402.41290K562SRSF1
TRADDENSG00000102871.1157.86070105.76970-0.870303.139501.52160K562SRSF9
TRADDENSG00000102871.11161.9426073.433201.140905.631304.60140K562TARDBP
TRADDENSG00000102871.11116.7230070.834800.720502.355801.60790K562TIA1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRADD is not available on ENCORE database.






No RBPs affect the alternative splcing events of TRADD on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TRADD is not avaliable on ENCORE database.