SLC25A28

General Information

Gene Name : SLC25A28
Gene ID : ENSG00000155287.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SLC25A28)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SLC25A28	ENSG00000155287.10	31.31	32.56	31.94	ENCSR000AEF
HepG2	SLC25A28	ENSG00000155287.10	22.89	24.56	23.73	ENCSR985KAT
K562	SLC25A28	ENSG00000155287.10	18.73	21.74	20.23	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SLC25A28 is not avaliable on ENCORE database.

Proteins bound to RNA

SLC25A28 RNA is bound by 22 proteins.

eCLIP assay for SLC25A28 is not avaliable on ENCORE database.

22 proteins are bound to SLC25A28 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	101370516	101370703	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.12757	6.89004	HepG2	PABPN1
chr10	101380007	101380160	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.66123	3.82184	K562	NCBP2
chr10	101380097	101380170	-	5'-UTR,intron-Distal,intron-Proximal	3.72536	3.01337	HepG2	GRSF1
chr10	101380008	101380125	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.84055	5.44142	HepG2	PCBP2
chr10	101380002	101380106	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.68163	12.58213	HepG2	GTF2F1
chr10	101380002	101380120	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.47850	12.41531	K562	GTF2F1
chr10	101380010	101380129	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.55296	25.79088	HepG2	PRPF4
chr10	101380000	101380115	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.44016	6.83379	HepG2	CSTF2T
chr10	101380005	101380094	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.05640	4.39734	K562	XRCC6
chr10	101372317	101372418	-	CDS,intron-Distal,intron-Proximal	3.74459	4.09623	HepG2	SF3B4
chr10	101380001	101380079	-	CDS,intron-Distal,intron-Proximal	3.81931	6.07730	K562	CSTF2T
chr10	101372306	101372367	-	CDS,intron-Distal,intron-Proximal	4.45485	5.18202	HepG2	U2AF1
chr10	101379797	101379837	-	CDS,intron-Distal	3.28811	3.18246	K562	PRPF8
chr10	101379951	101379999	-	CDS,intron-Distal,intron-Proximal	4.03979	3.51664	K562	RBM15
chr10	101379933	101380010	-	CDS,intron-Distal,intron-Proximal	3.41366	8.62028	HepG2	PRPF4
chr10	101380005	101380079	-	CDS,intron-Distal,intron-Proximal	3.90502	4.44979	HepG2	GRSF1
chr10	101379872	101379992	-	CDS,intron-Distal,intron-Proximal	3.45421	4.38394	K562	DROSHA
chr10	101379916	101380000	-	CDS,intron-Distal,intron-Proximal	3.59341	5.08839	HepG2	CSTF2T
chr10	101379918	101380001	-	CDS,intron-Distal,intron-Proximal	3.48027	4.76898	K562	CSTF2T
chr10	101379963	101380086	-	CDS,intron-Distal,intron-Proximal	3.53613	3.37274	K562	AKAP8L
chr10	101372321	101372368	-	CDS,intron-Distal,intron-Proximal	4.15045	4.20812	K562	U2AF1
chr10	101379913	101380039	-	CDS,intron-Distal,intron-Proximal	3.80097	6.14054	K562	PRPF8
chr10	101371067	101371122	-	CDS,intron-Distal	3.99766	6.08299	HepG2	PPIG
chr10	101379942	101380002	-	CDS,intron-Distal,intron-Proximal	3.81013	4.13833	K562	GTF2F1
chr10	101379937	101380053	-	CDS,intron-Distal,intron-Proximal	4.46608	5.18476	K562	RBFOX2
chr10	101379757	101379821	-	CDS,intron-Distal	3.16671	4.29223	HepG2	PRPF8
chr10	101379998	101380083	-	CDS,intron-Distal,intron-Proximal	4.52442	16.66674	HepG2	FAM120A
chr10	101379940	101380005	-	CDS,intron-Distal,intron-Proximal	5.28441	9.21240	K562	GEMIN5
chr10	101372232	101372305	-	CDS,intron-Distal,intron-Proximal	5.08240	11.03354	K562	AQR
chr10	101379932	101380087	-	CDS,intron-Distal,intron-Proximal	5.47297	10.23954	K562	SLTM
chr10	101380005	101380078	-	CDS,intron-Distal,intron-Proximal	4.41934	15.20779	K562	GEMIN5
chr10	101379930	101379998	-	CDS,intron-Distal,intron-Proximal	3.93362	10.18863	HepG2	FAM120A
chr10	101379936	101379998	-	CDS,intron-Distal,intron-Proximal	3.30828	3.70236	HepG2	RBM15
chr10	101379812	101379931	-	CDS,intron-Distal,intron-Proximal	4.26691	4.81778	HepG2	SRSF1
chr10	101379992	101380067	-	CDS,intron-Distal,intron-Proximal	5.19881	6.38758	HepG2	SLTM
chr10	101379923	101380002	-	CDS,intron-Distal,intron-Proximal	4.34922	9.73265	HepG2	GTF2F1
chr10	101372324	101372368	-	CDS,intron-Distal,intron-Proximal	3.12126	7.72198	HepG2	U2AF2
chr10	101372313	101372368	-	CDS,intron-Distal,intron-Proximal	4.30614	4.47532	K562	U2AF2
chr10	101372259	101372296	-	intron-Distal,intron-Proximal	4.24566	3.49003	K562	PRPF8
chr10	101371148	101371222	-	intron-Distal	3.28811	3.47285	K562	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for SLC25A28 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for SLC25A28 is not available on ENCORE database.
33 RBPs can affect the levels of SLC25A28.

The Knockdown/knockout RNA-Seq assay for SLC25A28 is not available on ENCORE database.

33 RBPs can affect the gene expression of SLC25A28 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SLC25A28	ENSG00000155287.6	229.67580	159.04490	0.53010	2.10480	1.42460	HepG2	CIRBP
SLC25A28	ENSG00000155287.6	294.26490	193.80830	0.60240	2.83920	2.20580	HepG2	DDX3X
SLC25A28	ENSG00000155287.6	258.75850	166.48490	0.63610	2.73390	2.12020	HepG2	DDX6
SLC25A28	ENSG00000155287.6	337.29770	176.87030	0.93120	6.17650	5.22590	HepG2	EIF4A3
SLC25A28	ENSG00000155287.6	297.17610	178.45410	0.73570	4.02150	3.19740	HepG2	FXR1
SLC25A28	ENSG00000155287.6	249.52900	165.54260	0.59190	2.59950	1.95470	HepG2	G3BP1
SLC25A28	ENSG00000155287.6	319.83720	175.74430	0.86380	5.47370	4.20740	HepG2	G3BP2
SLC25A28	ENSG00000155287.6	221.08500	148.89600	0.57020	2.26770	1.46400	HepG2	GEMIN5
SLC25A28	ENSG00000155287.6	266.63190	167.62620	0.66950	3.23980	2.48500	HepG2	HNRNPK
SLC25A28	ENSG00000155287.6	339.04650	178.51640	0.92530	3.60230	2.85340	HepG2	MAGOH
SLC25A28	ENSG00000155287.6	326.47380	183.74430	0.82920	4.92880	4.09580	HepG2	NCBP2
SLC25A28	ENSG00000155287.6	238.91100	163.63660	0.54590	2.26860	1.60960	HepG2	PABPC4
SLC25A28	ENSG00000155287.6	325.76450	209.25320	0.63850	4.55380	3.80810	HepG2	PCBP1
SLC25A28	ENSG00000155287.6	227.39430	320.84560	-0.49670	2.59950	2.01940	HepG2	PUF60
SLC25A28	ENSG00000155287.6	189.91090	308.50620	-0.70000	4.51180	3.89230	HepG2	RBM22
SLC25A28	ENSG00000155287.6	507.35270	381.81360	0.41000	1.98010	1.40790	HepG2	SF3A3
SLC25A28	ENSG00000155287.6	220.80240	316.78290	-0.52070	3.23670	2.56860	HepG2	SRSF5
SLC25A28	ENSG00000155287.6	282.10540	207.96490	0.43980	2.13310	1.62900	HepG2	TAF15
SLC25A28	ENSG00000155287.6	139.47290	211.18600	-0.59850	2.68720	2.19260	HepG2	TIAL1
SLC25A28	ENSG00000155287.6	208.97320	340.92910	-0.70620	5.20850	4.47020	K562	AGGF1
SLC25A28	ENSG00000155287.6	187.97070	354.74990	-0.91630	7.19410	6.09840	K562	AKAP8L
SLC25A28	ENSG00000155287.6	377.55560	563.11030	-0.57670	4.22960	3.01500	K562	CELF1
SLC25A28	ENSG00000155287.6	160.19630	97.85330	0.71100	2.71140	1.92250	K562	EIF3G
SLC25A28	ENSG00000155287.6	211.06210	143.82360	0.55330	2.37910	1.61610	K562	EIF4A3
SLC25A28	ENSG00000155287.6	251.42170	149.56950	0.74920	4.54240	3.79410	K562	FXR1
SLC25A28	ENSG00000155287.6	130.41070	227.99360	-0.80590	4.66080	3.27840	K562	HNRNPA1
SLC25A28	ENSG00000155287.6	281.26030	376.48650	-0.42070	2.16160	1.44320	K562	KIF1C
SLC25A28	ENSG00000155287.6	193.25260	295.62170	-0.61330	2.28310	1.50040	K562	NAA15
SLC25A28	ENSG00000155287.6	194.55670	298.05470	-0.61540	4.22200	3.32160	K562	NSUN2
SLC25A28	ENSG00000155287.6	320.27540	207.48540	0.62620	4.02530	2.25240	K562	PHF6
SLC25A28	ENSG00000155287.6	218.08400	158.52760	0.46010	2.01020	1.42720	K562	PTBP1
SLC25A28	ENSG00000155287.6	133.69080	351.83120	-1.39600	12.85270	11.72850	K562	PUS1
SLC25A28	ENSG00000155287.6	234.99970	342.79270	-0.54470	3.31780	2.67760	K562	RBM15
SLC25A28	ENSG00000155287.6	111.80460	178.90110	-0.67820	2.85730	1.57520	K562	SLBP
SLC25A28	ENSG00000155287.6	235.69350	170.18790	0.46970	2.11860	1.39880	K562	SYNCRIP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SLC25A28

General Information

Functions

Localization

Domains (AlphaFold: SLC25A28)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SLC25A28 is not avaliable on ENCORE database.

22 proteins are bound to SLC25A28 RNA:

eCLIP assay for SLC25A28 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SLC25A28 is not available on ENCORE database.

33 RBPs can affect the gene expression of SLC25A28 :

The Knockdown/knockout RNA-Seq assay for SLC25A28 is not available on ENCORE database.

No RBPs affect the alternative splcing events of SLC25A28 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for SLC25A28 is not avaliable on ENCORE database.