RP11-793H13.10

General Information

Gene Name : RP11-793H13.10
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-793H13.10)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-793H13.10 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-793H13.10 RNA is bound by 23 proteins.

eCLIP assay for RP11-793H13.10 is not avaliable on ENCORE database.

23 proteins are bound to RP11-793H13.10 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	53994728	53994794	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.23799	3.47879	HepG2	PPIG
chr12	53926347	53926427	-	CDS,intron-Distal,intron-Proximal	3.45781	8.56398	HepG2	U2AF2
chr12	53918413	53918461	-	CDS,intron-Distal	3.90339	3.16051	HepG2	PPIG
chr12	53926381	53926426	-	CDS,intron-Distal,intron-Proximal	4.61860	4.48002	K562	AQR
chr12	53925607	53925683	-	CDS,intron-Distal,intron-Proximal	3.97044	3.20743	HepG2	PPIG
chr12	53928304	53928419	-	CDS,intron-Distal,intron-Proximal	3.73570	7.26220	HepG2	PCBP2
chr12	53926955	53927014	-	CDS,intron-Distal	3.39396	3.93645	HepG2	PPIG
chr12	53917005	53917104	-	CDS,intron-Distal,intron-Proximal	4.05425	7.08947	HepG2	PRPF8
chr12	53937111	53937152	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.13609	3.06595	HepG2	BCLAF1
chr12	53937106	53937208	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.41453	4.44630	K562	ZNF622
chr12	53926364	53926421	-	CDS,intron-Distal,intron-Proximal	3.87232	3.23382	HepG2	U2AF1
chr12	53900889	53900951	-	CDS,intron-Distal,intron-Proximal	3.67411	4.36528	HepG2	U2AF2
chr12	53926900	53926946	-	CDS,intron-Distal,intron-Proximal	4.52731	7.92018	K562	AQR
chr12	53926291	53926356	-	CDS,intron-Distal,intron-Proximal	4.08468	3.16051	HepG2	PPIG
chr12	53909633	53909683	-	3'-UTR,intron-Distal	3.31708	3.27944	K562	PTBP1
chr12	53909810	53909883	-	3'-UTR,intron-Distal	3.30705	3.54602	K562	TIA1
chr12	53910540	53910600	-	3'-UTR,intron-Distal	3.33380	3.35585	HepG2	QKI
chr12	53993658	53993739	-	intron-Distal	4.04591	7.25214	HepG2	CSTF2
chr12	53908411	53908475	-	3'-UTR,intron-Distal	5.17257	7.71000	K562	FAM120A
chr12	53905877	53905923	-	3'-UTR,intron-Distal	4.25498	6.58258	HepG2	PCBP2
chr12	53906021	53906080	-	3'-UTR,intron-Distal	4.09418	8.08956	HepG2	PCBP2
chr12	53906842	53906901	-	3'-UTR,intron-Distal	5.26566	25.68079	K562	UPF1
chr12	53909481	53909547	-	3'-UTR,intron-Distal,intron-Proximal	3.08873	3.35050	HepG2	SUGP2
chr12	53968079	53968159	-	intron-Distal	3.45377	3.59523	HepG2	SUGP2
chr12	53907245	53907289	-	3'-UTR,intron-Distal	5.20634	6.42091	K562	UPF1
chr12	53907327	53907372	-	3'-UTR,intron-Distal	3.94905	10.85611	K562	UPF1
chr12	53907620	53907673	-	3'-UTR,intron-Distal	3.54216	8.33876	K562	UPF1
chr12	53906117	53906136	-	3'-UTR,intron-Distal	5.52302	7.96764	HepG2	XPO5
chr12	53980533	53980634	-	intron-Distal	5.19345	9.16624	K562	TARDBP
chr12	53909765	53909868	-	3'-UTR,intron-Distal	3.95509	3.76295	K562	IGF2BP2
chr12	53909087	53909139	-	3'-UTR,intron-Distal	5.71544	10.81337	K562	UPF1
chr12	53910347	53910391	-	3'-UTR,intron-Distal,intron-Proximal	4.06792	9.37242	K562	UPF1
chr12	53908940	53908997	-	3'-UTR,intron-Distal	5.40695	18.93168	K562	UPF1
chr12	53985968	53986044	-	intron-Distal	4.13355	3.87294	K562	TARDBP
chr12	53993647	53993723	-	intron-Distal	4.13223	8.23042	HepG2	U2AF2
chr12	53908476	53908507	-	3'-UTR,intron-Distal	3.72567	6.55257	K562	UPF1
chr12	53907769	53907834	-	3'-UTR,intron-Distal	3.78376	5.10007	K562	FAM120A
chr12	53987342	53987419	-	intron-Distal	5.34136	10.44346	HepG2	QKI
chr12	53905874	53905969	-	3'-UTR,intron-Distal	5.55152	5.82558	K562	PCBP1
chr12	53910462	53910527	-	3'-UTR,intron-Distal	3.33622	10.62751	K562	UPF1
chr12	53906484	53906548	-	3'-UTR,intron-Distal	3.42446	3.57062	K562	IGF2BP1
chr12	53909741	53909790	-	3'-UTR,intron-Distal	4.25292	8.02555	HepG2	PCBP2
chr12	53906136	53906167	-	3'-UTR,intron-Distal	6.13330	12.84344	HepG2	XPO5
chr12	53906419	53906484	-	3'-UTR,intron-Distal	4.18040	4.24698	K562	IGF2BP1
chr12	53907767	53907823	-	3'-UTR,intron-Distal	4.86224	11.77875	K562	UPF1
chr12	53909797	53909899	-	3'-UTR,intron-Distal	3.75044	3.39827	HepG2	MATR3
chr12	53993774	53993914	-	intron-Distal	3.45816	10.41291	K562	KHSRP
chr12	53908649	53908705	-	3'-UTR,intron-Distal	3.37813	11.74548	K562	UPF1
chr12	53908393	53908476	-	3'-UTR,intron-Distal	3.63363	20.24540	K562	UPF1
chr12	53993667	53993738	-	intron-Distal	4.88554	7.46616	K562	CSTF2T
chr12	53906411	53906460	-	3'-UTR,intron-Distal	3.96469	7.87505	K562	UPF1
chr12	53908736	53908784	-	3'-UTR,intron-Distal	5.50262	9.20661	K562	UPF1
chr12	53986517	53986579	-	intron-Distal	4.51128	5.54528	HepG2	QKI
chr12	53969940	53970100	-	intron-Distal	5.04294	8.82993	HepG2	SUGP2
chr12	53906736	53906842	-	3'-UTR,intron-Distal	5.47878	30.29908	K562	UPF1
chr12	53909647	53909682	-	3'-UTR,intron-Distal	4.45068	8.66095	K562	UPF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-793H13.10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-793H13.10 is not available on ENCORE database.
29 RBPs can affect the levels of RP11-793H13.10.

The Knockdown/knockout RNA-Seq assay for RP11-793H13.10 is not available on ENCORE database.

29 RBPs can affect the gene expression of RP11-793H13.10 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-793H13.10	ENSG00000267281.2	83.69560	24.54730	1.76950	4.88650	3.63630	HepG2	BCCIP
RP11-793H13.10	ENSG00000267281.2	66.61870	28.34190	1.23290	2.79590	1.81520	HepG2	CCAR1
RP11-793H13.10	ENSG00000267281.2	59.02750	20.66420	1.51420	3.70420	2.96800	HepG2	EIF4A3
RP11-793H13.10	ENSG00000267281.2	140.15730	50.96950	1.45920	5.13770	4.36430	HepG2	ETF1
RP11-793H13.10	ENSG00000267281.2	95.24160	42.05700	1.17910	2.97580	2.17940	HepG2	FIP1L1
RP11-793H13.10	ENSG00000267281.2	60.81320	19.33700	1.65290	4.29990	3.48020	HepG2	G3BP1
RP11-793H13.10	ENSG00000267281.2	62.53430	20.52220	1.60740	4.01150	2.93130	HepG2	G3BP2
RP11-793H13.10	ENSG00000267281.2	59.79390	23.67560	1.33650	2.83870	2.13690	HepG2	HNRNPC
RP11-793H13.10	ENSG00000267281.2	45.86310	19.65740	1.22220	2.19610	1.58610	HepG2	IGF2BP2
RP11-793H13.10	ENSG00000267281.2	55.05260	20.84710	1.40090	3.00420	2.32160	HepG2	MAGOH
RP11-793H13.10	ENSG00000267281.2	55.04320	21.46040	1.35880	2.78610	2.15130	HepG2	NCBP2
RP11-793H13.10	ENSG00000267281.2	91.58530	20.54750	2.15610	10.17800	9.13060	HepG2	PCBP1
RP11-793H13.10	ENSG00000267281.2	61.97000	25.18300	1.29900	3.20680	2.09020	HepG2	PCBP2
RP11-793H13.10	ENSG00000267281.2	51.40940	18.62000	1.46510	2.80820	1.99350	HepG2	PRPF8
RP11-793H13.10	ENSG00000267281.2	6.28760	24.31710	-1.95140	1.98960	1.38190	HepG2	RAVER1
RP11-793H13.10	ENSG00000267281.2	24.71880	50.54850	-1.03210	2.10320	1.47740	HepG2	SLBP
RP11-793H13.10	ENSG00000267281.2	64.41910	18.49000	1.80060	6.22020	5.45190	HepG2	SRSF9
RP11-793H13.10	ENSG00000267281.2	32.35090	59.20430	-0.87190	1.88400	1.35250	HepG2	SUCLG1
RP11-793H13.10	ENSG00000267281.2	67.83820	22.85080	1.56980	4.72760	4.10950	HepG2	TIAL1
RP11-793H13.10	ENSG00000267281.2	37.96230	14.19350	1.41920	2.57510	1.84370	HepG2	UCHL5
RP11-793H13.10	ENSG00000267281.2	79.48870	22.00230	1.85300	4.82530	3.48150	HepG2	UPF2
RP11-793H13.10	ENSG00000267281.2	53.18810	23.65130	1.16910	1.99020	1.36750	HepG2	XRN2
RP11-793H13.10	ENSG00000267281.2	61.17970	24.72080	1.30720	3.43010	2.69500	HepG2	ZC3H8
RP11-793H13.10	ENSG00000267281.2	52.52930	25.48250	1.04350	2.02140	1.50450	K562	AQR
RP11-793H13.10	ENSG00000267281.2	30.80680	7.75670	1.98960	2.73110	1.67980	K562	CNOT7
RP11-793H13.10	ENSG00000267281.2	35.36980	8.58870	2.04190	3.12960	2.02480	K562	EIF3D
RP11-793H13.10	ENSG00000267281.2	27.70910	9.24090	1.58420	2.12530	1.40160	K562	EIF4A3
RP11-793H13.10	ENSG00000267281.2	36.31560	9.60960	1.91790	3.27760	2.62740	K562	FXR1
RP11-793H13.10	ENSG00000267281.2	35.33660	7.35920	2.26340	3.80540	3.11890	K562	HNRNPC
RP11-793H13.10	ENSG00000267281.2	71.81290	29.89000	1.26450	3.28170	2.39420	K562	PUF60
RP11-793H13.10	ENSG00000267281.2	55.40270	14.03680	1.98060	4.13100	2.41260	K562	SFPQ
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-793H13.10 is not available on ENCORE database.

1 RBPs can affect the splicing of RP11-793H13.10 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
MXE	RP11-793H13.10	ENSG00000267281.2	chr12	-	53931198	53931336	53937113	53937232	53928285	53928443	53946324	53946421	-0.11400	0.00015	0.00164	2included	HepG2	U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-793H13.10

General Information

Functions

Localization

Domains (AlphaFold: RP11-793H13.10)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-793H13.10 is not avaliable on ENCORE database.

23 proteins are bound to RP11-793H13.10 RNA:

eCLIP assay for RP11-793H13.10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-793H13.10 is not available on ENCORE database.

29 RBPs can affect the gene expression of RP11-793H13.10 :

The Knockdown/knockout RNA-Seq assay for RP11-793H13.10 is not available on ENCORE database.

1 RBPs can affect the splicing of RP11-793H13.10 :

The Knockdown/knockout RNA-Seq assay for RP11-793H13.10 is not avaliable on ENCORE database.