RP11-611E13.2

General Information

Gene Name : RP11-611E13.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-611E13.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-611E13.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-611E13.2 RNA is bound by 3 proteins.

eCLIP assay for RP11-611E13.2 is not avaliable on ENCORE database.

3 proteins are bound to RP11-611E13.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	70634645	70634709	-	intron-Distal	4.45394	6.32746	K562	HNRNPL
chr12	70634567	70634807	-	intron-Distal	5.65328	13.84756	HepG2	HNRNPL
chr12	70636864	70636936	-	intron-Distal	4.43392	5.17013	K562	RBM15
chr12	70636184	70636256	-	intron-Distal,intron-Proximal	4.09811	3.35169	HepG2	U2AF2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-611E13.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-611E13.2 is not available on ENCORE database.
27 RBPs can affect the levels of RP11-611E13.2.

The Knockdown/knockout RNA-Seq assay for RP11-611E13.2 is not available on ENCORE database.

27 RBPs can affect the gene expression of RP11-611E13.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-611E13.2	ENSG00000257815.1	24.94710	56.86160	-1.18860	2.62650	1.54930	HepG2	CPSF7
RP11-611E13.2	ENSG00000257815.1	81.69380	36.36060	1.16770	3.06050	2.40770	HepG2	DDX3X
RP11-611E13.2	ENSG00000257815.1	21.04990	52.37830	-1.31520	2.60940	1.47990	HepG2	EIF2S2
RP11-611E13.2	ENSG00000257815.1	55.17350	26.80400	1.04140	2.20810	1.56200	HepG2	HNRNPF
RP11-611E13.2	ENSG00000257815.1	91.20040	31.46240	1.53530	4.95300	4.03950	HepG2	HNRNPK
RP11-611E13.2	ENSG00000257815.1	108.25630	34.47640	1.65070	6.34910	5.40530	HepG2	NCBP2
RP11-611E13.2	ENSG00000257815.1	67.10240	35.67340	0.91140	2.05930	1.47220	HepG2	RBM25
RP11-611E13.2	ENSG00000257815.1	24.53410	48.24170	-0.97550	1.90890	1.37590	HepG2	SRSF5
RP11-611E13.2	ENSG00000257815.1	66.04360	26.33570	1.32630	3.20300	2.46040	HepG2	SRSF7
RP11-611E13.2	ENSG00000257815.1	10.49570	32.08760	-1.61220	2.56870	2.03250	HepG2	SRSF9
RP11-611E13.2	ENSG00000257815.1	30.10350	54.87050	-0.86610	1.87950	1.34850	HepG2	SUCLG1
RP11-611E13.2	ENSG00000257815.1	29.26680	59.64230	-1.02710	2.16760	1.60490	HepG2	U2AF1
RP11-611E13.2	ENSG00000257815.1	112.87650	35.36420	1.67430	6.18880	5.35210	HepG2	UTP3
RP11-611E13.2	ENSG00000257815.1	57.71300	142.66340	-1.30560	4.99710	4.15740	K562	DDX47
RP11-611E13.2	ENSG00000257815.1	123.87180	53.03290	1.22380	4.66030	3.46040	K562	EFTUD2
RP11-611E13.2	ENSG00000257815.1	58.49370	99.45600	-0.76580	2.35110	1.59320	K562	EIF4A3
RP11-611E13.2	ENSG00000257815.1	51.86970	103.42920	-0.99570	3.54050	2.86900	K562	FXR1
RP11-611E13.2	ENSG00000257815.1	408.44250	109.53140	1.89870	12.16200	9.57670	K562	PABPN1
RP11-611E13.2	ENSG00000257815.1	148.98940	88.07000	0.75840	2.86430	1.86960	K562	PCBP2
RP11-611E13.2	ENSG00000257815.1	107.07100	51.60810	1.05280	2.97990	2.20200	K562	PRPF8
RP11-611E13.2	ENSG00000257815.1	52.54950	96.16860	-0.87190	2.90250	2.22480	K562	PTBP1
RP11-611E13.2	ENSG00000257815.1	123.41940	201.46480	-0.70700	3.18190	2.30880	K562	PUF60
RP11-611E13.2	ENSG00000257815.1	149.87870	214.35970	-0.51620	2.42180	1.42810	K562	PUM1
RP11-611E13.2	ENSG00000257815.1	350.84250	222.09820	0.65950	3.79800	3.17570	K562	PUS1
RP11-611E13.2	ENSG00000257815.1	374.43620	115.06140	1.70220	9.18080	6.52000	K562	SNRNP200
RP11-611E13.2	ENSG00000257815.1	146.06070	80.87970	0.85260	3.11670	2.01280	K562	SRFBP1
RP11-611E13.2	ENSG00000257815.1	153.57420	95.55340	0.68450	2.51180	1.61700	K562	TRIM56
RP11-611E13.2	ENSG00000257815.1	94.54470	150.82980	-0.67390	2.44760	1.32410	K562	UTP3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-611E13.2 is not available on ENCORE database.

3 RBPs can affect the splicing of RP11-611E13.2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-611E13.2	ENSG00000257815.1	chr12	-	70636845	70636984	70636576	70636673	70637091	70637129	0.22100	0.00000	0.00005	included	K562	PUS1
SE	RP11-611E13.2	ENSG00000257815.1	chr12	-	70636845	70636984	70636576	70636673	70637091	70637129	0.20300	0.00030	0.01055	included	K562	RBM15
SE	RP11-611E13.2	ENSG00000257815.1	chr12	-	70636845	70636984	70636576	70636673	70637091	70637129	0.16000	0.00407	0.07958	included	K562	AGGF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-611E13.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-611E13.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-611E13.2 is not avaliable on ENCORE database.

3 proteins are bound to RP11-611E13.2 RNA:

eCLIP assay for RP11-611E13.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-611E13.2 is not available on ENCORE database.

27 RBPs can affect the gene expression of RP11-611E13.2 :

The Knockdown/knockout RNA-Seq assay for RP11-611E13.2 is not available on ENCORE database.

3 RBPs can affect the splicing of RP11-611E13.2 :

The Knockdown/knockout RNA-Seq assay for RP11-611E13.2 is not avaliable on ENCORE database.