RP11-513O17.2

General Information

Gene Name       : RP11-513O17.2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-513O17.2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-513O17.2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-513O17.2 RNA is bound by 16 proteins.  







eCLIP assay for RP11-513O17.2 is not avaliable on ENCORE database.





16 proteins are bound to RP11-513O17.2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr85811652058116548+intron-Distal4.381553.71613K562UCHL5
chr85812743358127473+intron-Distal3.167944.31726K562SLTM
chr85812782658127931+intron-Distal5.1091915.02776K562SLTM
chr85812878158128818+intron-Distal4.497424.75882K562SLTM
chr85812800158128067+intron-Distal3.942233.84033K562SAFB2
chr85812236858122427+intron-Distal4.453027.52225K562UCHL5
chr85811636258116445+intron-Distal4.6859116.03825K562SLTM
chr85812227358122364+intron-Distal3.367679.10739K562SAFB2
chr85811832958118434+intron-Distal5.2948842.55348K562SLTM
chr85811833258118425+intron-Distal4.0988216.65805K562UCHL5
chr85812889658128951+intron-Distal3.934665.08142K562SLTM
chr85810662058106834+intron-Distal,intron-Proximal5.173228.16302K562CSTF2T
chr85812246958122554+intron-Distal5.077094.67377K562YWHAG
chr85812271958122801+intron-Distal3.4812110.85985K562SAFB2
chr85811855558118606+intron-Distal5.260068.80307K562UCHL5
chr85812421258124285+intron-Distal3.881555.30520K562UCHL5
chr85812764758127785+intron-Distal3.271518.53142K562UCHL5
chr85811833558118506+intron-Distal5.041106.45751K562TRA2A
chr85812280158122916+intron-Distal3.1586110.34548K562SAFB2
chr85812084058120921+intron-Distal,intron-Proximal3.617363.12941K562UCHL5
chr85812345158123493+intron-Distal3.552064.22563K562UCHL5
chr85811842558118500+intron-Distal5.2657318.80297K562UCHL5
chr85811826858118340+intron-Distal4.189204.13866K562PPIL4
chr85811847358118532+intron-Distal4.9544719.10701K562SLTM
chr85811833058118432+intron-Distal3.9573112.75768K562SAFB2
chr85812669058126756+intron-Distal3.437933.01707K562SLTM
chr85811853758118599+intron-Distal4.5523815.44283K562SLTM
chr85812251058122569+intron-Distal3.354835.95362K562SAFB2
chr85811862158118647+intron-Distal6.6801516.88513K562SLTM
chr85812261658122694+intron-Distal4.8905113.78461K562UCHL5
chr85812556558125624+intron-Distal4.979165.43245K562SLTM
chr85814486258144936+intron-Distal3.178153.81590K562HNRNPL
chr85812246858122514+intron-Distal5.2966415.70452K562SLTM
chr85811518758115273+intron-Distal4.608624.93122K562SLTM
chr85812247558122573+intron-Distal3.050669.99264K562UCHL5
chr85811833358118425+intron-Distal5.370276.94273K562YWHAG
chr85812039258120492+intron-Distal,intron-Proximal3.7646710.88713K562SLTM
chr85812270958122892+intron-Distal3.771774.48257K562FUS
chr85812949358129599+intron-Distal4.120823.36385K562UCHL5
chr85811673458116809+intron-Distal4.432039.48722K562UCHL5
chr85811672958116808+intron-Distal6.1565822.97536K562SLTM
chr85812765258127707+intron-Distal3.289905.10919K562SLTM
chr85812337458123401+intron-Distal5.3312715.36100K562SLTM
chr85812787958127934+intron-Distal4.062705.97050K562SAFB2
chr85812086158120920+intron-Distal,intron-Proximal3.926503.00828K562YWHAG
chr85812678858126841+intron-Distal4.658395.32699K562SLTM
chr85812273258122838+intron-Distal5.251569.79322K562MTPAP
chr85812272458122787+intron-Distal4.7605120.11435K562SLTM
chr85811827058118330+intron-Distal3.131867.33351K562SAFB2
chr85811861258118677+intron-Distal4.6537111.10249K562UCHL5
chr85812857158128612+intron-Distal3.969855.37287K562SLTM
chr85812281358122924+intron-Distal4.329444.44021K562YWHAG
chr85811767558117685+intron-Distal3.991394.19798K562SLTM
chr85812269458122800+intron-Distal3.8718618.08321K562UCHL5
chr85812274458122805+intron-Distal5.151527.51537K562YWHAG
chr85812340158123421+intron-Distal6.0228912.67753K562SLTM
chr85812771558127785+intron-Distal4.261504.37667K562SAFB2
chr85810662758106764+intron-Distal,intron-Proximal4.552619.81110K562GTF2F1
chr85811853858118595+intron-Distal3.406264.74884K562SAFB2
chr85812421458124286+intron-Distal4.4375215.77376K562SLTM
chr85812232558122383+intron-Distal6.7035323.59104K562SLTM
chr85812280058122902+intron-Distal4.3356818.56551K562UCHL5
chr85812226058122325+intron-Distal4.4216918.05839K562SLTM
chr85812226658122368+intron-Distal4.5543814.48434K562UCHL5
chr85811833058118392+intron-Distal3.014154.38249K562RBM15
chr85811826958118332+intron-Distal3.9466213.94470K562UCHL5
chr85811827258118329+intron-Distal5.0967920.11215K562SLTM
chr85812788158127945+intron-Distal5.019057.33003K562UCHL5
chr85811674458116809+intron-Distal5.8202112.64478K562SAFB2
chr85811834058118427+intron-Distal4.558734.79276K562PPIL4
chr85811845858118546+intron-Distal3.465983.88359K562MTPAP
chr85811827258118405+intron-Distal4.755566.12781K562ZNF622
chr85812923358129298+intron-Distal5.096935.77100K562SLTM
chr85812284158122939+intron-Distal5.0593546.59331K562SLTM
chr85812278758122841+intron-Distal4.7870120.57528K562SLTM
chr85812296358123012+intron-Distal4.7463114.35625K562SLTM
chr85812229458122398+intron-Distal3.616105.15435K562PPIL4
chr85811827058118328+intron-Distal3.965983.26507K562MTPAP
chr85811673958116808+intron-Distal3.099724.71322K562BUD13
chr85812912958129181+intron-Distal5.035477.13440K562SLTM
chr85812085858120868+intron-Distal,intron-Proximal4.532627.91573K562SLTM
chr85812271458122881+intron-Distal4.4737610.36212K562PPIL4
chr85812083358120930+intron-Distal,intron-Proximal3.517454.74884K562SAFB2
chr85812154658121644+intron-Distal5.108627.32644K562SLTM
chr85812259458122688+intron-Distal5.137719.67261K562SAFB2
chr85811864758118691+intron-Distal5.0941615.02776K562SLTM
chr85812087758120924+intron-Distal4.236318.24333K562SLTM
chr85811597258116052+intron-Distal4.702325.86954K562UCHL5
chr85811089258111029+intron-Distal3.327804.70224K562KHSRP
chr85812672758126812+intron-Distal4.331784.42734K562UCHL5
chr85812661758126660+intron-Distal4.497424.75882K562SLTM
chr85811835558118430+intron-Distal4.766525.61483K562LARP4
chr85812247358122543+intron-Distal4.343634.82934K562RBM15
chr85812764458127715+intron-Distal3.504464.74884K562SAFB2
chr85811826858118328+intron-Distal3.397677.50495K562BUD13
chr85811843458118473+intron-Distal4.6192618.05839K562SLTM
chr85812246058122510+intron-Distal3.659435.56248K562SAFB2
chr85811637358116424+intron-Distal3.946393.00996K562BUD13
chr85812571358125778+intron-Distal3.960426.73435K562SLTM
chr85812251458122572+intron-Distal4.3961512.28312K562SLTM
chr85811859958118621+intron-Distal5.4132415.70452K562SLTM
chr85812345058123493+intron-Distal6.0228912.67753K562SLTM
chr85811843058118492+intron-Distal3.700724.17575K562YWHAG
chr85811877558118827+intron-Distal5.1264312.28530K562SLTM
chr85812246458122540+intron-Distal4.128574.66884K562PPIL4
chr85811650058116549+intron-Distal3.257114.56967K562SLTM
chr85811827158118330+intron-Distal4.504563.55849K562YWHAG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-513O17.2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-513O17.2 is not available on ENCORE database.

  • 19 RBPs can affect the levels of RP11-513O17.2.  








The Knockdown/knockout RNA-Seq assay for RP11-513O17.2 is not available on ENCORE database.





19 RBPs can affect the gene expression of RP11-513O17.2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-513O17.2ENSG00000253301.145.90580112.43230-1.292305.206504.46850K562AGGF1
RP11-513O17.2ENSG00000253301.162.60800116.98870-0.901903.161402.46220K562AKAP8L
RP11-513O17.2ENSG00000253301.1185.05850100.729900.877403.082301.95320K562CNOT7
RP11-513O17.2ENSG00000253301.1230.76480153.359100.589402.307801.41770K562CELF1
RP11-513O17.2ENSG00000253301.170.69620125.90160-0.832603.274502.31220K562DKC1
RP11-513O17.2ENSG00000253301.126.3196054.04420-1.038001.993201.30880K562EIF3G
RP11-513O17.2ENSG00000253301.126.7754056.67740-1.081902.309501.74870K562FXR1
RP11-513O17.2ENSG00000253301.1153.7298080.551200.932303.631902.76950K562GRSF1
RP11-513O17.2ENSG00000253301.167.93770118.84730-0.806802.344301.38200K562MAK16
RP11-513O17.2ENSG00000253301.161.37270139.09150-1.180405.405404.04770K562MBNL1
RP11-513O17.2ENSG00000253301.1146.7387088.812000.724302.577801.73700K562METAP2
RP11-513O17.2ENSG00000253301.1145.9076072.339901.012104.885603.83350K562MTPAP
RP11-513O17.2ENSG00000253301.142.8750097.49240-1.185203.283902.30720K562NAA15
RP11-513O17.2ENSG00000253301.1122.7607080.371200.611002.017301.36820K562NSUN2
RP11-513O17.2ENSG00000253301.116.9482060.36910-1.832704.446003.49580K562PRPF8
RP11-513O17.2ENSG00000253301.1224.29360141.775000.661702.932001.94570K562PUM2
RP11-513O17.2ENSG00000253301.151.20080116.03600-1.180304.346303.68830K562PUS1
RP11-513O17.2ENSG00000253301.149.90680113.04690-1.179604.600703.85530K562RBM15
RP11-513O17.2ENSG00000253301.129.8347073.12860-1.293403.847602.87840K562SYNCRIP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-513O17.2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-513O17.2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-513O17.2 is not avaliable on ENCORE database.