RP11-156P1.3

General Information

Gene Name       : RP11-156P1.3
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-156P1.3)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-156P1.3 is not avaliable on ENCORE database.



Proteins bound to RNA

  • RP11-156P1.3 RNA is bound by 5 proteins.  







eCLIP assay for RP11-156P1.3 is not avaliable on ENCORE database.





5 proteins are bound to RP11-156P1.3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174517737945177566-intron-Distal,intron-Proximal3.713904.49353K562SLTM
chr174515315845153227-intron-Distal4.156773.71677HepG2HNRNPL
chr174517271645172807-intron-Distal6.0586416.94324HepG2PCBP2
chr174514478545144872-intron-Distal,intron-Proximal3.875943.45994HepG2NCBP2
chr174515537345155425-intron-Distal4.164684.21977HepG2HNRNPL
chr174516918145169273-intron-Distal3.696293.25538K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-156P1.3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-156P1.3 is not available on ENCORE database.

  • 35 RBPs can affect the levels of RP11-156P1.3.  








The Knockdown/knockout RNA-Seq assay for RP11-156P1.3 is not available on ENCORE database.





35 RBPs can affect the gene expression of RP11-156P1.3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-156P1.3ENSG00000262879.1195.26560108.509000.847503.255002.68460HepG2AKAP1
RP11-156P1.3ENSG00000262879.1204.68540289.49360-0.500102.277401.72870HepG2BOP1
RP11-156P1.3ENSG00000262879.1179.40010122.455500.550802.425501.79480HepG2CKAP4
RP11-156P1.3ENSG00000262879.1505.11440265.776200.926308.610707.45640HepG2CPSF6
RP11-156P1.3ENSG00000262879.1172.8599094.844200.865902.783902.14270HepG2EIF4A3
RP11-156P1.3ENSG00000262879.1151.2508088.779700.768502.817602.14720HepG2G3BP1
RP11-156P1.3ENSG00000262879.1158.7538095.751400.729302.599201.96290HepG2MAGOH
RP11-156P1.3ENSG00000262879.128.8133062.73810-1.122602.415101.59680HepG2PABPC1
RP11-156P1.3ENSG00000262879.1166.7775097.812600.769704.053503.36540HepG2PUM1
RP11-156P1.3ENSG00000262879.1195.67850284.60420-0.540502.436701.77290HepG2SF3B1
RP11-156P1.3ENSG00000262879.1153.12500103.465000.565502.121101.56270HepG2SUCLG1
RP11-156P1.3ENSG00000262879.1347.90200162.459301.098502.929101.91000HepG2U2AF2
RP11-156P1.3ENSG00000262879.1179.32760328.40530-0.872903.773003.12860K562AGGF1
RP11-156P1.3ENSG00000262879.1228.48920360.83390-0.659204.609803.26630K562AKAP8
RP11-156P1.3ENSG00000262879.1172.15450341.71230-0.989108.193607.00900K562AKAP8L
RP11-156P1.3ENSG00000262879.186.21750144.91580-0.749202.233801.69720K562AQR
RP11-156P1.3ENSG00000262879.1219.24300358.52270-0.709505.893904.49750K562ATP5C1
RP11-156P1.3ENSG00000262879.1255.72100392.48950-0.618104.783503.19680K562CCDC124
RP11-156P1.3ENSG00000262879.1197.52210367.75930-0.896704.436103.28990K562DKC1
RP11-156P1.3ENSG00000262879.1295.38120120.157901.2975010.775909.66160K562HNRNPC
RP11-156P1.3ENSG00000262879.1349.95040260.620300.425102.258101.31270K562HNRNPL
RP11-156P1.3ENSG00000262879.165.93760136.67830-1.051604.636902.71690K562KHDRBS1
RP11-156P1.3ENSG00000262879.1169.06110362.67140-1.1011010.455108.56900K562KIF1C
RP11-156P1.3ENSG00000262879.1201.19960347.14200-0.786905.693503.95820K562MAK16
RP11-156P1.3ENSG00000262879.1216.53710406.27950-0.907908.038306.32410K562MBNL1
RP11-156P1.3ENSG00000262879.1126.13060284.76990-1.174906.943305.30890K562NAA15
RP11-156P1.3ENSG00000262879.1543.95890263.259101.046907.042905.71310K562PCBP3
RP11-156P1.3ENSG00000262879.1325.24890201.925200.687604.226203.23250K562POLR2G
RP11-156P1.3ENSG00000262879.1122.97710338.94460-1.4627012.8835011.75890K562PUS1
RP11-156P1.3ENSG00000262879.1155.27510330.20090-1.088509.951008.85390K562RBM15
RP11-156P1.3ENSG00000262879.1156.5265098.261300.671602.510001.56970K562RCC2
RP11-156P1.3ENSG00000262879.1147.5741093.151900.663702.264701.35790K562SRFBP1
RP11-156P1.3ENSG00000262879.1167.50690103.620100.692802.591901.68890K562TIAL1
RP11-156P1.3ENSG00000262879.1203.19180343.59400-0.757903.358901.88630K562UTP18
RP11-156P1.3ENSG00000262879.1222.52580333.98070-0.585802.760501.56030K562UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-156P1.3 is not available on ENCORE database.





5 RBPs can affect the splicing of RP11-156P1.3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SERP11-156P1.3ENSG00000262879.1chr17-451314834513157945110643451107474513382545134119-0.638000.008860.09597excludedK562PUS1
SERP11-156P1.3ENSG00000262879.1chr17-451314834513157945110643451107474513382545134119-0.426000.002260.03754excludedK562HNRNPC
MXERP11-156P1.3ENSG00000262879.1chr17-4511240945112492451314834513157945110643451107474513382545134119-0.246000.002750.065772includedK562RBM15
MXERP11-156P1.3ENSG00000262879.1chr17-4511240945112492451314834513157945110643451107474513382545134119-0.182000.007290.082312includedK562U2AF1
MXERP11-156P1.3ENSG00000262879.1chr17-4511240945112492451314834513157945110643451107474513382545134119-0.266000.005490.038972includedK562AQR
MXERP11-156P1.3ENSG00000262879.1chr17-4511064345110747451314834513157945098947450990874513382545134119-0.367000.000410.010162includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RP11-156P1.3 is not avaliable on ENCORE database.