RP11-156P1.2

General Information

Gene Name       : RP11-156P1.2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-156P1.2)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-156P1.2 is not avaliable on ENCORE database.



Proteins bound to RNA

  • RP11-156P1.2 RNA is bound by 31 proteins.  







eCLIP assay for RP11-156P1.2 is not avaliable on ENCORE database.





31 proteins are bound to RP11-156P1.2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174500051045000561+5'-UTR,CDS3.479466.40214HepG2NCBP2
chr174500052045000589+5'-UTR,CDS,intron-Proximal3.945858.88978K562DDX3X
chr174500955045009601+CDS,intron-Proximal4.314013.93614HepG2AQR
chr174501602745016119+CDS,intron-Proximal3.3262211.18765HepG2PPIG
chr174500694845007031+CDS,intron-Proximal3.743367.64728K562AQR
chr174500688445006899+5'-UTR,CDS,intron-Proximal4.053725.63105K562DDX3X
chr174501600945016048+CDS3.880583.39593HepG2PRPF4
chr174500686745006965+5'-UTR,CDS,intron-Proximal3.337806.93074HepG2BUD13
chr174501248745012527+CDS,intron-Distal4.0541714.97716HepG2PPIG
chr174501606445016107+CDS,intron-Proximal4.3141516.82955HepG2PRPF8
chr174501605645016112+CDS,intron-Proximal3.8342113.69709HepG2GRWD1
chr174500688945006951+5'-UTR,CDS,intron-Proximal3.577969.44988HepG2PPIG
chr174500689945006948+5'-UTR,CDS3.463256.60215K562DDX3X
chr174500690045006942+5'-UTR,CDS3.188936.79825HepG2GRWD1
chr174501594545015994+CDS,intron-Proximal3.8246123.73826HepG2U2AF2
chr174500691845007022+CDS,intron-Proximal3.056308.02352HepG2PRPF8
chr174500056145000593+5'-UTR,CDS,intron-Proximal4.006206.09067HepG2NCBP2
chr174501243745012475+CDS,intron-Distal3.439725.18023HepG2GRWD1
chr174500847045008570+CDS4.3152810.74047HepG2GRWD1
chr174501596145016013+CDS,intron-Proximal3.3493316.24042HepG2PPIG
chr174500058045000627+5'-UTR,CDS,intron-Proximal4.256273.59236HepG2AQR
chr174501594445016001+CDS,intron-Proximal4.5642910.92416K562U2AF2
chr174501605745016156+3'-UTR,CDS,intron-Proximal4.6667810.79362K562LIN28B
chr174504383945043905+CDS,intron-Proximal4.110003.50006HepG2SF3B4
chr174500848545008510+CDS3.200854.08171K562YBX3
chr174500956045009607+CDS,intron-Proximal4.3560313.26139HepG2PRPF8
chr174501601845016056+CDS4.6553713.23869HepG2GRWD1
chr174502084045020923+intron-Distal3.806309.06898HepG2HNRNPK
chr174503822245038275+intron-Distal3.746107.94789HepG2HLTF
chr174501752745017563+intron-Distal3.1407013.85515K562UPF1
chr174501622445016313+3'-UTR,intron-Distal,polyA_site4.6746124.37861K562TARDBP
chr174501770445017736+intron-Distal4.8510912.17194K562UPF1
chr174503383745033889+intron-Distal3.828887.11398HepG2HNRNPC
chr174503284845032896+intron-Distal3.058414.23271HepG2HNRNPM
chr174502443345024545+intron-Distal4.109824.10765K562HNRNPA1
chr174501439545014443+intron-Distal3.625804.61500HepG2HNRNPM
chr174501762345017667+intron-Distal3.7562213.56677K562UPF1
chr174501742845017520+intron-Distal3.5424625.25021HepG2PTBP1
chr174501659345016670+3'-UTR,intron-Distal4.8849825.53334K562UPF1
chr174504350345043555+intron-Distal3.794803.64762HepG2QKI
chr174501816645018210+intron-Distal4.0272913.82382K562UPF1
chr174501926345019312+intron-Distal4.460419.43510K562UPF1
chr174502774045027816+intron-Distal4.142713.43967HepG2TAF15
chr174503719745037269+intron-Distal4.785066.09701HepG2SRSF9
chr174503978245039859+intron-Distal3.051093.01110HepG2HLTF
chr174501743145017535+intron-Distal3.1063510.03961K562PTBP1
chr174503768645037763+intron-Distal3.845579.10042HepG2HLTF
chr174501774845017786+intron-Distal5.4696117.60288K562UPF1
chr174501698745017098+3'-UTR,intron-Distal3.3532932.36957K562UPF1
chr174504228145042316+intron-Distal3.089503.07152HepG2HLTF
chr174502452445024610+intron-Distal3.187785.84594HepG2HNRNPU
chr174503726945037363+intron-Distal4.741336.95446HepG2SRSF9
chr174501691245016958+3'-UTR,intron-Distal4.3065017.28969K562UPF1
chr174501686445016922+3'-UTR,intron-Distal3.314934.06711K562AKAP1
chr174501781145017852+intron-Distal,intron-Proximal3.9138515.05756K562UPF1
chr174501878845018842+intron-Distal3.3591613.57440K562UPF1
chr174501745045017530+intron-Distal3.2519527.72430HepG2PCBP2
chr174501655645016594+3'-UTR,intron-Distal3.827183.30425K562LIN28B
chr174501702345017093+3'-UTR,intron-Distal3.736078.71584K562IGF2BP2
chr174504965245049738+intron-Distal4.138467.54289HepG2PTBP1
chr174501623445016294+3'-UTR,intron-Distal,polyA_site4.014924.45240K562EIF4G2
chr174502252445022584+intron-Distal3.492374.20880HepG2GTF2F1
chr174501616845016217+3'-UTR,intron-Distal,intron-Proximal4.637594.36861HepG2SRSF7
chr174501660545016653+3'-UTR,intron-Distal3.912353.06084HepG2HNRNPK
chr174504342945043503+intron-Distal6.0609311.50595HepG2QKI
chr174501700245017090+3'-UTR,intron-Distal3.2329712.73639K562FAM120A
chr174503765645037686+intron-Distal3.311303.61820HepG2HLTF
chr174501683845016912+3'-UTR,intron-Distal4.0645637.13355K562UPF1
chr174501004845010156+intron-Distal3.794273.08314K562TARDBP
chr174501454645014596+intron-Distal3.578184.97523HepG2HNRNPM
chr174501743845017527+intron-Distal3.6243541.99353K562UPF1
chr174501777445017848+intron-Distal,intron-Proximal3.899903.66583K562AKAP1
chr174501617245016224+3'-UTR,intron-Distal4.9626432.02430K562TARDBP
chr174503815945038190+intron-Distal4.311304.42137HepG2HLTF
chr174504338145043429+intron-Distal4.955776.23638HepG2QKI
chr174501711745017179+3'-UTR,intron-Distal4.0554812.54016K562UPF1
chr174501917845019259+intron-Distal3.403269.62434K562UPF1
chr174500857345008611+intron-Proximal4.131423.31283K562PRPF8
chr174500956545009598+CDS,intron-Proximal3.464894.88100K562AQR
chr174500857445008614+intron-Proximal4.932626.04760K562AQR
chr174500696045007002+intron-Proximal3.324933.54718K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-156P1.2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-156P1.2 is not available on ENCORE database.

  • 10 RBPs can affect the levels of RP11-156P1.2.  








The Knockdown/knockout RNA-Seq assay for RP11-156P1.2 is not available on ENCORE database.





10 RBPs can affect the gene expression of RP11-156P1.2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-156P1.2ENSG00000262633.129.567808.084801.870602.608302.02530HepG2BOP1
RP11-156P1.2ENSG00000262633.10.8507011.05690-3.700102.257101.57080HepG2CNOT7
RP11-156P1.2ENSG00000262633.144.745309.518302.232905.085603.36130HepG2DDX47
RP11-156P1.2ENSG00000262633.10.000009.52480-99999.999992.571902.00060HepG2EIF2S1
RP11-156P1.2ENSG00000262633.14.4067021.41220-2.280602.177501.33410HepG2HNRNPM
RP11-156P1.2ENSG00000262633.137.238802.941803.661904.877502.98130HepG2SF1
RP11-156P1.2ENSG00000262633.13.7270037.81160-3.342706.646605.57320HepG2SF3A3
RP11-156P1.2ENSG00000262633.111.2103034.46630-1.620402.652901.62260HepG2UTP18
RP11-156P1.2ENSG00000262633.114.6940035.39340-1.268302.118901.51950HepG2ZC3H8
RP11-156P1.2ENSG00000262633.110.6389036.87990-1.793501.891701.41630HepG2ZNF622
RP11-156P1.2ENSG00000262633.116.736902.829402.564402.140301.37950K562BOP1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-156P1.2 is not available on ENCORE database.





1 RBPs can affect the splicing of RP11-156P1.2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
MXERP11-156P1.2ENSG00000262633.1chr17+4501239445012535450159644501607045009432450095654504389945043992-0.151000.000380.012742includedHepG2HNRNPK

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RP11-156P1.2 is not avaliable on ENCORE database.