PQLC3

General Information

Gene Name       : PQLC3
Gene ID             : ENSG00000162976.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PQLC3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PQLC3ENSG00000162976.129.553.336.44ENCSR000AEF
HepG2PQLC3ENSG00000162976.122.611.852.23ENCSR985KAT
K562PQLC3ENSG00000162976.128.116.737.42ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PQLC3 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on PQLC3 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for PQLC3 is not avaliable on ENCORE database.






NO known proteins are bound to PQLC3 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for PQLC3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PQLC3 is not available on ENCORE database.

  • 46 RBPs can affect the levels of PQLC3.  








The Knockdown/knockout RNA-Seq assay for PQLC3 is not available on ENCORE database.





46 RBPs can affect the gene expression of PQLC3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PQLC3ENSG00000162976.8273.9414083.710701.7103011.1026010.10540HepG2AKAP1
PQLC3ENSG00000162976.89.1421029.67550-1.698702.292401.74200HepG2BOP1
PQLC3ENSG00000162976.896.4717039.779901.278004.572803.61140HepG2CALR
PQLC3ENSG00000162976.886.4552044.610900.954502.363701.47040HepG2CCAR1
PQLC3ENSG00000162976.87.5696049.41010-2.706506.266305.11540HepG2CNOT7
PQLC3ENSG00000162976.874.5714027.245501.452504.190603.35950HepG2CPSF6
PQLC3ENSG00000162976.876.0177028.647301.407804.331903.52100HepG2DKC1
PQLC3ENSG00000162976.868.0576030.730401.147003.091902.35280HepG2DNAJC21
PQLC3ENSG00000162976.8134.3102073.253700.874501.834801.31000HepG2EIF4A3
PQLC3ENSG00000162976.8101.4488060.055600.756302.157301.61390HepG2ETF1
PQLC3ENSG00000162976.873.4559027.288501.428502.771301.75490HepG2FTO
PQLC3ENSG00000162976.8119.5856030.889701.952708.689707.59810HepG2GPKOW
PQLC3ENSG00000162976.8117.2094031.024501.917508.596507.55070HepG2HNRNPA1
PQLC3ENSG00000162976.884.1946034.501601.287003.525802.75060HepG2HNRNPC
PQLC3ENSG00000162976.8112.9069029.478201.937308.481507.44450HepG2HNRNPLL
PQLC3ENSG00000162976.8171.5768069.666001.300204.694603.83560HepG2IGF2BP2
PQLC3ENSG00000162976.8118.9124067.495400.816903.054402.42170HepG2PCBP1
PQLC3ENSG00000162976.8172.4049064.551901.417207.916606.97690HepG2PUF60
PQLC3ENSG00000162976.8135.2974068.469900.982503.645902.88100HepG2PUM2
PQLC3ENSG00000162976.836.2389074.37900-1.037402.618202.00750HepG2QKI
PQLC3ENSG00000162976.8100.2746050.196500.998203.328402.77490HepG2RBM22
PQLC3ENSG00000162976.897.0858041.452901.227703.930402.80740HepG2RPS10
PQLC3ENSG00000162976.859.7862030.748500.959201.994501.46430HepG2RPS19
PQLC3ENSG00000162976.8138.5633049.554101.483406.668305.43460HepG2RPS3A
PQLC3ENSG00000162976.8104.6846057.485200.864702.660501.60670HepG2RPS5
PQLC3ENSG00000162976.8126.5655032.467301.962708.067906.73430HepG2SNRNP70
PQLC3ENSG00000162976.8143.6363049.230101.544709.484908.64600HepG2SSB
PQLC3ENSG00000162976.856.9363023.674701.265902.942801.97500HepG2SUPT6H
PQLC3ENSG00000162976.8155.7916043.438401.842509.463208.33800HepG2SUPV3L1
PQLC3ENSG00000162976.8126.4878067.088400.914803.603902.97940HepG2TAF15
PQLC3ENSG00000162976.8205.2973033.331602.6227024.5731023.36470HepG2TIAL1
PQLC3ENSG00000162976.878.1207026.534101.557805.631804.69130HepG2UPF1
PQLC3ENSG00000162976.8147.22010282.96490-0.942605.359504.58910K562AQR
PQLC3ENSG00000162976.836.16030180.73960-2.3214013.9064011.57550K562CNOT7
PQLC3ENSG00000162976.878.22110134.44990-0.781402.591101.71110K562EFTUD2
PQLC3ENSG00000162976.855.82680181.29850-1.6993012.4018010.68860K562EIF3G
PQLC3ENSG00000162976.8169.19260315.13930-0.897306.791105.34080K562EIF4G2
PQLC3ENSG00000162976.8172.61200103.034800.744302.194501.43810K562FIP1L1
PQLC3ENSG00000162976.888.64790194.20050-1.131407.348206.42550K562FXR1
PQLC3ENSG00000162976.883.19750147.21900-0.823403.090202.46370K562HNRNPC
PQLC3ENSG00000162976.8271.38470139.684100.958106.031104.86950K562HSPD1
PQLC3ENSG00000162976.881.71040164.90520-1.013003.499201.87330K562ILF2
PQLC3ENSG00000162976.854.54870130.83490-1.262104.937803.93760K562PRPF8
PQLC3ENSG00000162976.872.35640274.66070-1.924508.614007.48480K562PTBP1
PQLC3ENSG00000162976.854.93430268.66510-2.2900021.4775019.98980K562PUS1
PQLC3ENSG00000162976.8200.56210133.279300.589502.191901.46860K562RPS19
PQLC3ENSG00000162976.8121.54680214.88790-0.822104.906603.75200K562SF3B4
PQLC3ENSG00000162976.8134.30310269.22930-1.003303.436102.65340K562SRSF1
PQLC3ENSG00000162976.8165.60790272.54180-0.718702.338001.68490K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PQLC3 is not available on ENCORE database.





8 RBPs can affect the splicing of PQLC3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPQLC3ENSG00000162976.8chr2+1131509311315135113120501131217111317862113190000.440000.002120.06492includedK562PRPF8
SEPQLC3ENSG00000162976.8chr2+113150931131513511312050113121711131786211319000-0.231000.000490.01793excludedK562AKAP8L
SEPQLC3ENSG00000162976.8chr2+1131509311315135113120501131217111317862113190000.522000.000250.01307includedK562FXR1
SEPQLC3ENSG00000162976.8chr2+113150931131513511312050113121711131786211319000-0.348000.000440.00856excludedK562PUS1
SEPQLC3ENSG00000162976.8chr2+113150931131513511312050113121711131786211319000-0.307000.000010.00086excludedK562UTP18
SEPQLC3ENSG00000162976.8chr2+113150931131513511312070113121711131786211318150-0.293000.000050.00238excludedK562RBM15
SEPQLC3ENSG00000162976.8chr2+113150931131513511312050113121711131786211319000-0.374000.000000.00000excludedK562AGGF1
SEPQLC3ENSG00000162976.8chr2+1131509311315135113120501131217111317862113190000.299000.004120.05968includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PQLC3 is not avaliable on ENCORE database.