MTIF3

General Information

Gene Name       : MTIF3
Gene ID             : ENSG00000122033.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MTIF3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MTIF3ENSG00000122033.1447.3946.2746.83ENCSR000AEF
HepG2MTIF3ENSG00000122033.1420.9839.1930.09ENCSR985KAT
K562MTIF3ENSG00000122033.1441.9749.4945.73ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MTIF3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MTIF3 RNA is bound by 3 proteins.  







eCLIP assay for MTIF3 is not avaliable on ENCORE database.





3 proteins are bound to MTIF3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr132802418628024388-5'-UTR,intron-Distal,intron-Proximal3.723703.07008K562NONO
chr132801420328014275-CDS,intron-Distal,intron-Proximal3.085853.70975K562UCHL5
chr132800998528010018-CDS,intron-Distal3.511697.86995K562YBX3
chr132800992728009985-CDS,intron-Distal4.272689.00050K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MTIF3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MTIF3 is not available on ENCORE database.

  • 33 RBPs can affect the levels of MTIF3.  








The Knockdown/knockout RNA-Seq assay for MTIF3 is not available on ENCORE database.





33 RBPs can affect the gene expression of MTIF3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MTIF3ENSG00000122033.10674.65670508.790700.407002.035101.57080HepG2AKAP1
MTIF3ENSG00000122033.10572.09580420.986200.442402.529201.77660HepG2ASCC1
MTIF3ENSG00000122033.10515.23480402.457700.356302.469701.81420HepG2AUH
MTIF3ENSG00000122033.10658.28810443.146500.570804.591503.84360HepG2BOP1
MTIF3ENSG00000122033.10655.08490481.990300.442603.588602.72600HepG2CALR
MTIF3ENSG00000122033.10606.85210399.964400.601404.366203.40700HepG2CIRBP
MTIF3ENSG00000122033.10336.70760487.39300-0.533603.082102.42650HepG2DDX3X
MTIF3ENSG00000122033.10426.77010288.511100.564703.077302.36840HepG2DKC1
MTIF3ENSG00000122033.10307.13540444.80870-0.534302.779302.13860HepG2EIF4A3
MTIF3ENSG00000122033.10322.52380448.75880-0.476502.508401.84820HepG2FXR1
MTIF3ENSG00000122033.10312.20850416.30780-0.415101.917601.35910HepG2G3BP1
MTIF3ENSG00000122033.10166.92620262.04390-0.650603.384502.38100HepG2GEMIN5
MTIF3ENSG00000122033.10233.01280342.43560-0.555402.887602.18060HepG2HNRNPC
MTIF3ENSG00000122033.10635.08840440.095600.529003.577202.87140HepG2HNRNPLL
MTIF3ENSG00000122033.10304.20070448.91530-0.561403.236102.52700HepG2MAGOH
MTIF3ENSG00000122033.10239.89870462.07180-0.945707.543406.52210HepG2NCBP2
MTIF3ENSG00000122033.10543.82800386.209100.493703.784503.20340HepG2RBM22
MTIF3ENSG00000122033.10662.49490478.130800.470403.711402.93900HepG2RPLP0
MTIF3ENSG00000122033.10303.91470201.227800.594703.274102.42790HepG2RRP9
MTIF3ENSG00000122033.10170.38700482.93770-1.5030014.7059013.07810HepG2SF3A3
MTIF3ENSG00000122033.10689.98100468.726400.557703.287202.18620HepG2SRSF3
MTIF3ENSG00000122033.10371.27160464.73310-0.323902.145301.58590HepG2SRSF5
MTIF3ENSG00000122033.10550.17220378.733100.538605.365404.69800HepG2SSB
MTIF3ENSG00000122033.10503.81530413.498500.284901.847801.33680HepG2UTP3
MTIF3ENSG00000122033.10398.65210258.221600.626402.715801.99750HepG2XRN2
MTIF3ENSG00000122033.10446.20510335.599300.410903.121302.41550HepG2ZC3H8
MTIF3ENSG00000122033.10342.31210471.03880-0.460504.004203.37920HepG2ZNF622
MTIF3ENSG00000122033.10779.15260616.839900.336902.131501.46250K562GRSF1
MTIF3ENSG00000122033.10300.24670440.48430-0.552903.616102.94500K562HNRNPC
MTIF3ENSG00000122033.10606.47800447.920700.437102.451201.57800K562HNRNPM
MTIF3ENSG00000122033.101006.93120738.334500.447503.507002.61370K562HSPD1
MTIF3ENSG00000122033.10797.11540618.902400.365002.090901.60630K562PUS1
MTIF3ENSG00000122033.10307.15560519.05930-0.756908.222106.87390K562SF3A3
MTIF3ENSG00000122033.10441.86820336.796300.391602.333301.57910K562SYNCRIP
MTIF3ENSG00000122033.10625.92130477.294900.391002.699501.83330K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MTIF3 is not available on ENCORE database.





12 RBPs can affect the splicing of MTIF3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMTIF3ENSG00000122033.10chr13-2801515328015214280141252801458628019224280192930.156000.000460.09094includedHepG2ILF3
SEMTIF3ENSG00000122033.10chr13-2801515328015214280141252801458628019224280192930.146000.000070.00307includedHepG2HNRNPK
SEMTIF3ENSG00000122033.10chr13-280141252801458628009779280100302801922428019293-0.081000.008900.07398excludedK562AQR
SEMTIF3ENSG00000122033.10chr13-2801515328015214280141252801458628019224280192930.096000.000060.02206includedHepG2BCLAF1
SEMTIF3ENSG00000122033.10chr13-280141252801458628009779280100302801922428019293-0.163000.000240.00503excludedK562PUS1
SEMTIF3ENSG00000122033.10chr13-2801515328015214280141252801458628019224280192930.176000.000050.02810includedHepG2XPO5
SEMTIF3ENSG00000122033.10chr13-280112522801141028009775280100302801922428019293-0.153000.000910.03517excludedK562TARDBP
SEMTIF3ENSG00000122033.10chr13-2801515328015214280141252801458628019224280192930.322000.000000.00001includedK562HNRNPU
SEMTIF3ENSG00000122033.10chr13-2801515328015214280141252801458628019224280192930.088000.000080.02378includedHepG2DDX55
SEMTIF3ENSG00000122033.10chr13-2801515328015379280141252801458628019224280192930.084000.000860.03578includedK562SF3B1
SEMTIF3ENSG00000122033.10chr13-2801515328015214280141252801458628019224280192930.357000.000000.00000includedHepG2HNRNPU
SEMTIF3ENSG00000122033.10chr13-280112522801141028009775280100302801922428019293-0.266000.000000.00003excludedK562HNRNPC
A3SSMTIF3ENSG00000122033.10chr13-2801128128011525280112812801141028014125280145860.063000.004510.02641longerK562AQR
MXEMTIF3ENSG00000122033.10chr13-2801125228011410280141252801458628009775280100302801922428019293-0.171000.000510.020582includedHepG2XRN2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MTIF3 is not avaliable on ENCORE database.