LNX1

General Information

Gene Name       : LNX1
Gene ID             : ENSG00000072201.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LNX1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LNX1ENSG00000072201.130.810.720.77ENCSR000AEF
HepG2LNX1ENSG00000072201.130.320.060.19ENCSR985KAT
K562LNX1ENSG00000072201.133.612.012.81ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
LNX1Ribo-STAMP-293TshRNABGRSLV02-67,BGRSLV02-68BGRSLV02-1,BGRSLV02-2NotSatisfiedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LNX1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on LNX1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for LNX1 is not avaliable on ENCORE database.






NO known proteins are bound to LNX1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for LNX1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LNX1 is not available on ENCORE database.

  • 35 RBPs can affect the levels of LNX1.  








The Knockdown/knockout RNA-Seq assay for LNX1 is not available on ENCORE database.





35 RBPs can affect the gene expression of LNX1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LNX1ENSG00000072201.971.6156010.207902.810507.814306.96960HepG2AKAP1
LNX1ENSG00000072201.934.002607.109202.257804.178703.24890HepG2AKAP8L
LNX1ENSG00000072201.9104.811907.076403.8886021.6576020.18990HepG2CKAP4
LNX1ENSG00000072201.954.336009.776302.474505.880705.00060HepG2DDX3X
LNX1ENSG00000072201.936.420308.402902.115703.443702.76170HepG2DDX6
LNX1ENSG00000072201.924.457506.763901.854302.257701.63540HepG2DKC1
LNX1ENSG00000072201.948.185708.073102.577305.850605.00600HepG2EIF2S1
LNX1ENSG00000072201.931.336606.915402.179903.595402.64330HepG2EWSR1
LNX1ENSG00000072201.929.426808.350501.817102.689001.58850HepG2FUS
LNX1ENSG00000072201.934.878008.053702.114503.425201.86490HepG2HLTF
LNX1ENSG00000072201.940.6997010.548901.947804.317403.48880HepG2HNRNPL
LNX1ENSG00000072201.9133.597009.271203.8489021.6815020.01580HepG2NCBP2
LNX1ENSG00000072201.930.810108.252301.900402.884302.14730HepG2PABPC4
LNX1ENSG00000072201.923.755004.872302.285402.531101.75700HepG2PRPF8
LNX1ENSG00000072201.950.2588012.192602.043303.888201.78550HepG2PSIP1
LNX1ENSG00000072201.936.7272010.573401.796303.072702.50180HepG2PTBP1
LNX1ENSG00000072201.934.8230010.961001.667602.750402.15540HepG2PUF60
LNX1ENSG00000072201.933.841707.199602.232704.144903.41740HepG2PUS1
LNX1ENSG00000072201.923.601906.521401.855602.297901.50830HepG2RBM15
LNX1ENSG00000072201.9223.3207030.916602.8526028.7889027.61500HepG2SRFBP1
LNX1ENSG00000072201.949.0019011.493502.091904.404303.84140HepG2SRSF1
LNX1ENSG00000072201.956.9472026.837001.085302.410501.92480HepG2SSB
LNX1ENSG00000072201.933.1065012.307901.427402.220101.65200HepG2SUCLG1
LNX1ENSG00000072201.931.5539010.574301.577202.412901.94050HepG2TIAL1
LNX1ENSG00000072201.927.130508.383601.694202.358501.38010HepG2XRCC6
LNX1ENSG00000072201.924.687806.187701.996202.060801.42700HepG2XRN2
LNX1ENSG00000072201.933.4618010.223901.710503.006002.44310HepG2ZNF622
LNX1ENSG00000072201.943.78300118.21970-1.433004.717103.98820K562AQR
LNX1ENSG00000072201.959.74460117.59260-0.976903.910603.15490K562DDX47
LNX1ENSG00000072201.9157.0307078.210401.005505.183904.24370K562EIF2S2
LNX1ENSG00000072201.948.2219083.89960-0.799002.190701.45680K562EIF4A3
LNX1ENSG00000072201.944.3494087.25130-0.976302.987302.36230K562FXR1
LNX1ENSG00000072201.938.7541076.44720-0.980102.543801.76720K562MTPAP
LNX1ENSG00000072201.9124.1049077.052700.687502.398701.58180K562WDR3
LNX1ENSG00000072201.942.4570080.13650-0.916502.691501.85550K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LNX1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of LNX1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for LNX1 is not avaliable on ENCORE database.