LANCL3

General Information

Gene Name       : LANCL3
Gene ID             : ENSG00000147036.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LANCL3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878LANCL3ENSG00000147036.110.000.000.00ENCSR000AEF
HepG2LANCL3ENSG00000147036.110.000.020.01ENCSR985KAT
K562LANCL3ENSG00000147036.110.470.610.54ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LANCL3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LANCL3 RNA is bound by 2 proteins.  







eCLIP assay for LANCL3 is not avaliable on ENCORE database.





2 proteins are bound to LANCL3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX3753640537536459+3'-UTR,intron-Distal4.354415.29390K562TARDBP
chrX3753655837536647+3'-UTR,intron-Distal4.862047.52645K562TARDBP
chrX3744190337441963+intron-Distal3.903793.01456K562EXOSC5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LANCL3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LANCL3 is not available on ENCORE database.

  • 48 RBPs can affect the levels of LANCL3.  








The Knockdown/knockout RNA-Seq assay for LANCL3 is not available on ENCORE database.





48 RBPs can affect the gene expression of LANCL3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LANCL3ENSG00000147036.7355.60360208.814000.768002.812102.23990K562AGGF1
LANCL3ENSG00000147036.7313.87940185.608400.757804.668302.66770K562AKAP1
LANCL3ENSG00000147036.7412.91800217.287600.926108.785207.54940K562AKAP8L
LANCL3ENSG00000147036.7349.81380227.176400.622702.292201.75050K562AQR
LANCL3ENSG00000147036.7361.21280228.000600.663705.568404.21970K562ATP5C1
LANCL3ENSG00000147036.7202.48830108.467100.900503.040801.54080K562BUD13
LANCL3ENSG00000147036.7190.90570123.375200.629702.971901.40740K562CEBPZ
LANCL3ENSG00000147036.7147.73760237.45570-0.684603.541102.07960K562CIRBP
LANCL3ENSG00000147036.7476.62680293.113000.701304.432703.19100K562CELF1
LANCL3ENSG00000147036.7168.28590111.372600.595402.263001.43790K562EFTUD2
LANCL3ENSG00000147036.784.68260127.94000-0.595302.006801.37720K562EIF2S2
LANCL3ENSG00000147036.7130.05770196.48150-0.595202.571401.78050K562EIF4A3
LANCL3ENSG00000147036.7269.34790176.941000.606103.902902.49160K562EIF4B
LANCL3ENSG00000147036.794.69580204.33230-1.109507.262306.34520K562FXR1
LANCL3ENSG00000147036.7291.69070143.203801.026308.856306.91240K562GLRX3
LANCL3ENSG00000147036.7400.82200200.648700.998204.237402.62700K562HNRNPA2B1
LANCL3ENSG00000147036.757.63100122.61430-1.089204.073603.36570K562HNRNPC
LANCL3ENSG00000147036.785.89050184.26440-1.101206.389704.72080K562HNRNPL
LANCL3ENSG00000147036.7312.08390182.269600.775805.860604.54720K562HNRNPU
LANCL3ENSG00000147036.7351.69920230.571200.609004.205903.16080K562KIF1C
LANCL3ENSG00000147036.7449.53890258.301500.799307.336805.71840K562MBNL1
LANCL3ENSG00000147036.7410.49190253.946500.692704.093302.71900K562MSI2
LANCL3ENSG00000147036.7297.63980181.052900.717103.223802.25680K562NAA15
LANCL3ENSG00000147036.7294.99310175.450800.749502.345301.44880K562PABPN1
LANCL3ENSG00000147036.7330.05020227.535200.536503.264801.79190K562PCBP1
LANCL3ENSG00000147036.7167.87890259.94940-0.630803.068902.21060K562PUF60
LANCL3ENSG00000147036.7449.11380215.438201.059709.766708.79490K562PUS1
LANCL3ENSG00000147036.7338.60270191.831600.819703.841502.13090K562RAVER1
LANCL3ENSG00000147036.7391.49660209.954700.898808.896907.86020K562RBM15
LANCL3ENSG00000147036.7432.71060215.844301.003303.990702.04670K562RBM39
LANCL3ENSG00000147036.741.93100100.31610-1.258504.450203.18990K562RCC2
LANCL3ENSG00000147036.7146.03380254.99680-0.804203.899902.68550K562RPS3
LANCL3ENSG00000147036.785.25180140.60040-0.721802.475801.45470K562SAFB
LANCL3ENSG00000147036.7290.27870160.419700.855502.660001.49050K562SF1
LANCL3ENSG00000147036.7244.99820165.070600.569603.142202.27370K562SF3A3
LANCL3ENSG00000147036.7333.96070209.038800.675804.994503.82920K562SF3B4
LANCL3ENSG00000147036.7291.94760169.118900.787605.941704.63700K562SRPK2
LANCL3ENSG00000147036.7109.67020221.74540-1.015706.251605.19960K562SRSF1
LANCL3ENSG00000147036.7197.82880126.515600.644803.392102.08810K562SRSF7
LANCL3ENSG00000147036.7244.59240146.854200.735903.805102.18960K562SSRP1
LANCL3ENSG00000147036.7279.76450134.297901.058707.273705.18520K562STAU1
LANCL3ENSG00000147036.7482.64580225.984501.094603.836101.52950K562SUGP2
LANCL3ENSG00000147036.7388.96040220.397900.819402.791801.35950K562SUPT6H
LANCL3ENSG00000147036.779.61830158.28670-0.991404.752403.67050K562SYNCRIP
LANCL3ENSG00000147036.7185.00010111.066800.736003.079102.00030K562UCHL5
LANCL3ENSG00000147036.7122.27160177.37420-0.536702.177201.53450K562UPF1
LANCL3ENSG00000147036.7544.05630269.365701.014107.164405.09480K562WRN
LANCL3ENSG00000147036.7402.20680255.821500.652702.352201.56700K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LANCL3 is not available on ENCORE database.





1 RBPs can affect the splicing of LANCL3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SELANCL3ENSG00000147036.7chrX+3752762037527703375265343752674237534906375437160.509000.000200.08847includedK562AARS

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LANCL3 is not avaliable on ENCORE database.