GABRG3

General Information

Gene Name       : GABRG3
Gene ID             : ENSG00000182256.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GABRG3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GABRG3ENSG00000182256.120.000.010.01ENCSR000AEF
HepG2GABRG3ENSG00000182256.120.000.000.00ENCSR985KAT
K562GABRG3ENSG00000182256.1210.669.8010.23ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GABRG3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GABRG3 RNA is bound by 25 proteins.  







eCLIP assay for GABRG3 is not avaliable on ENCORE database.





25 proteins are bound to GABRG3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr152735673427356834+intron-Distal4.415903.28572K562HNRNPM
chr152743234427432387+intron-Distal4.699738.80887K562EXOSC5
chr152737500327375116+intron-Distal3.3952810.90985K562KHSRP
chr152737730927377340+intron-Distal3.903793.01445K562EXOSC5
chr152740482527404889+intron-Distal4.269124.80949K562HNRNPK
chr152735659527356685+intron-Distal3.374075.96782K562MATR3
chr152735052727350563+intron-Distal3.221163.73364K562SAFB2
chr152734396827344073+intron-Distal4.6096714.35766K562SAFB2
chr152737794627378048+intron-Distal3.024603.51248K562PTBP1
chr152742488627424946+intron-Distal3.478384.65797K562TARDBP
chr152770050127700665+intron-Distal4.538105.18738K562TARDBP
chr152739118927391244+intron-Distal3.483285.15509K562SAFB2
chr152733402027334127+intron-Distal4.1451813.55655K562RBFOX2
chr152734961727349728+intron-Distal3.149593.17174K562SAFB
chr152734786627347936+intron-Distal5.638879.52888K562QKI
chr152743080427430896+intron-Distal5.5052311.84112K562KHSRP
chr152745050827450544+intron-Distal5.212288.69609K562EXOSC5
chr152739443027394519+intron-Distal3.085405.10412K562KHDRBS1
chr152734980527349878+intron-Distal3.505917.37797K562SAFB2
chr152743209627432154+intron-Distal3.385067.40678K562EXOSC5
chr152738593527385961+intron-Distal3.942958.11138K562KHSRP
chr152772062427720935+intron-Distal4.567555.44904K562TARDBP
chr152743199227432036+intron-Distal5.5460211.66247K562EXOSC5
chr152753649127536570+intron-Distal4.293724.37030K562KHSRP
chr152741974027419939+intron-Distal3.446516.21675K562MATR3
chr152735351927353627+intron-Distal3.559198.27886K562EXOSC5
chr152735280627352862+intron-Distal3.253543.91899K562EXOSC5
chr152733452127334619+intron-Distal3.734773.01619K562FUS
chr152735078927350877+intron-Distal4.7501415.67003K562SAFB2
chr152745158127451643+intron-Distal7.0697133.48214K562EXOSC5
chr152733584727335922+intron-Distal3.046343.68839K562KHSRP
chr152751059327510682+intron-Distal4.646987.23320K562KHDRBS1
chr152759694327597023+intron-Distal4.758096.96521K562TARDBP
chr152770075827700860+intron-Distal3.390473.93348K562TARDBP
chr152744853727448604+intron-Distal4.500989.10500K562EXOSC5
chr152754844427548557+intron-Distal3.742043.33164K562SAFB2
chr152734764927347723+intron-Distal3.336175.34137K562SAFB2
chr152770096427701055+intron-Distal4.717004.67055K562EIF4G2
chr152750918527509284+intron-Distal3.272256.83235K562KHDRBS1
chr152743240127432447+intron-Distal5.0182012.87128K562EXOSC5
chr152759667427596790+intron-Distal5.040339.25844K562KHSRP
chr152741818627418316+intron-Distal4.449105.18391K562HNRNPL
chr152739404627394093+intron-Distal3.117054.09612K562KHDRBS1
chr152745076327450794+intron-Distal4.7981612.54948K562EXOSC5
chr152734055127340670+intron-Distal3.317783.84725K562NONO
chr152759726327597379+intron-Distal4.818735.68841K562KHSRP
chr152745170727451768+intron-Distal5.1581015.47240K562EXOSC5
chr152743779627437871+intron-Distal3.315003.09339K562MATR3
chr152748284127482896+intron-Distal3.322703.67498K562SAFB2
chr152735361827353741+intron-Distal3.313975.01300K562RBFOX2
chr152735108627351136+intron-Distal3.754376.56424K562SAFB2
chr152743274327432782+intron-Distal4.164777.31365K562EXOSC5
chr152750995327510052+intron-Distal5.267116.23225K562QKI
chr152741068427410832+intron-Distal3.290043.32889K562MATR3
chr152745039127450442+intron-Distal4.1510411.23512K562EXOSC5
chr152733413227334190+intron-Distal3.090284.89781K562RBFOX2
chr152735123727351367+intron-Distal4.3910717.61679K562SAFB2
chr152742589027426004+intron-Distal3.445365.54602K562QKI
chr152739171627391748+intron-Distal4.056213.22483K562SAFB2
chr152733916027339219+intron-Distal3.506129.14049K562RBFOX2
chr152745062427450656+intron-Distal4.9200810.29529K562EXOSC5
chr152735689727356960+intron-Distal4.616084.49973K562MATR3
chr152746091727460990+intron-Distal4.6396511.61021K562TARDBP
chr152737679127376822+intron-Distal4.779186.08953K562EXOSC5
chr152735182327351875+intron-Distal4.556215.60468K562SAFB2
chr152744956827449595+intron-Distal3.926555.80937K562EXOSC5
chr152744871027448744+intron-Distal4.860936.08869K562EXOSC5
chr152745104127451097+intron-Distal6.2688018.99984K562EXOSC5
chr152734602427346079+intron-Distal3.196315.13218K562SAFB2
chr152744507927445147+intron-Distal5.2197019.10366K562PTBP1
chr152743235527432472+intron-Distal4.497033.28572K562HNRNPM
chr152758081127580912+intron-Distal4.457665.79169K562SAFB2
chr152733769027337780+intron-Distal5.4633011.30381K562HNRNPM
chr152743155927431596+intron-Distal3.666843.02234K562KHSRP
chr152738229627382410+intron-Distal3.246583.72310K562HNRNPK
chr152733406727334124+intron-Distal3.819316.07730K562CSTF2T
chr152733621827336275+intron-Distal4.263473.28572K562HNRNPM
chr152744874427448791+intron-Distal3.883478.78073K562EXOSC5
chr152745454927454600+intron-Distal5.609568.42544K562PTBP1
chr152759659127596674+intron-Distal3.589424.76825K562KHSRP
chr152737664827376702+intron-Distal3.223505.69808K562EXOSC5
chr152739975027399800+intron-Distal3.482085.40624K562KHSRP
chr152744135227441522+intron-Distal3.668325.33544K562MATR3
chr152743178427431825+intron-Distal5.093768.36828K562EXOSC5
chr152738583727385917+intron-Distal4.355035.25174K562KHSRP
chr152734660727346676+intron-Distal3.845773.25633K562PPIL4
chr152751414127514250+intron-Distal4.405715.32928K562MATR3
chr152737973927379827+intron-Distal4.700025.33971K562HNRNPK
chr152744993627449967+intron-Distal5.6468411.66401K562EXOSC5
chr152759604127596182+intron-Distal4.5296611.48607K562TARDBP
chr152744907127449114+intron-Distal5.141878.36828K562EXOSC5
chr152738545927385573+intron-Distal5.069556.61547K562HNRNPM
chr152745006727450132+intron-Distal6.2035619.33500K562EXOSC5
chr152743073027430804+intron-Distal5.4003311.62275K562KHSRP
chr152737720827377287+intron-Distal3.253347.70554K562KHSRP
chr152751535127515414+intron-Distal4.060133.87294K562TARDBP
chr152759714727597225+intron-Distal4.517775.02888K562KHSRP
chr152759733727597409+intron-Distal4.8812316.27966K562EIF4G2
chr152759565427595705+intron-Distal4.368065.34995K562EIF4G2
chr152759728727597386+intron-Distal5.244319.43874K562TARDBP
chr152770096027701028+intron-Distal3.272383.68431K562TARDBP
chr152759703727597140+intron-Distal4.916466.09994K562KHSRP
chr152744923027449292+intron-Distal4.7981612.54948K562EXOSC5
chr152734999627350047+intron-Distal3.778836.99206K562SAFB2
chr152751041327510465+intron-Distal3.568213.08967K562KHDRBS1
chr152734323927343286+intron-Distal3.810335.10467K562SAFB2
chr152734608327346156+intron-Distal5.7167316.30273K562SAFB2
chr152744666327446742+intron-Distal4.706623.28818K562LSM11
chr152737649827376547+intron-Distal3.202906.89904K562EXOSC5
chr152734669627346753+intron-Distal4.101649.45776K562SAFB2
chr152746088927460917+intron-Distal5.3532910.51914K562TARDBP
chr152737664027376738+intron-Distal5.335567.63393K562HNRNPM
chr152738369127383776+intron-Distal4.271563.93366K562RBFOX2
chr152739980027399854+intron-Distal3.999784.14103K562KHSRP
chr152745089027450932+intron-Distal6.1418717.66037K562EXOSC5
chr152744148627441570+intron-Distal3.376873.69083K562PTBP1
chr152745204927452120+intron-Distal5.0626714.82019K562EXOSC5
chr152744892727448967+intron-Distal4.951866.73640K562EXOSC5
chr152747616927476233+intron-Distal4.992668.61835K562TARDBP
chr152749802827498099+intron-Distal3.711885.85006K562NONO
chr152745154627451581+intron-Distal5.0228713.19705K562EXOSC5
chr152740939527409508+intron-Distal3.102995.65240K562HNRNPL
chr152736854927368604+intron-Distal3.533823.25952K562HNRNPU
chr152738954027389584+intron-Distal3.319244.08075K562SAFB2
chr152734372827343826+intron-Distal3.383887.79057K562SAFB2
chr152751505627515146+intron-Distal4.998819.35213K562QKI
chr152735187527351940+intron-Distal3.922477.86445K562SAFB2
chr152738605227386120+intron-Distal4.139654.38266K562TARDBP
chr152733379827333882+intron-Distal3.245085.68931K562RBFOX2
chr152741539027415450+intron-Distal3.948704.15306K562SAFB2
chr152743604927436094+intron-Distal4.534544.80399K562EXOSC5
chr152735613027356186+intron-Distal4.874825.89856K562PTBP1
chr152743171027431761+intron-Distal3.658306.13018K562EXOSC5
chr152733768027337768+intron-Distal3.491193.80158K562NONO
chr152741069827410838+intron-Distal4.220765.63677K562PTBP1
chr152733921927339289+intron-Distal3.193544.48738K562RBFOX2
chr152734266227342730+intron-Distal5.4241325.17316K562PTBP1
chr152734496627345015+intron-Distal4.568867.11415K562SAFB2
chr152739056427390612+intron-Distal3.256484.48017K562SAFB2
chr152744520627445266+intron-Distal4.7014210.02898K562PTBP1
chr152743052627430561+intron-Distal3.114093.07751K562KHSRP
chr152745065627450701+intron-Distal5.4397315.47240K562EXOSC5
chr152745109727451146+intron-Distal4.8709812.87128K562EXOSC5
chr152733787327337922+intron-Distal4.325614.27460K562HNRNPM
chr152745182427451848+intron-Distal4.167987.91405K562EXOSC5
chr152737537527375462+intron-Distal3.515277.02273K562MATR3
chr152743066127430726+intron-Distal5.515489.35180K562EXOSC5
chr152751393527514019+intron-Distal4.304833.23532K562MATR3
chr152733344427333501+intron-Distal3.850486.30606K562NCBP2
chr152759581027595945+intron-Distal6.6946336.56118K562EIF4G2
chr152734962027349702+intron-Distal3.8967110.51818K562SAFB2
chr152744045227440472+intron-Distal3.8433210.96533K562PTBP1
chr152746082627460889+intron-Distal3.898156.68220K562TARDBP
chr152759682427596965+intron-Distal5.230429.04304K562KHSRP
chr152734615627346219+intron-Distal3.527928.14546K562SAFB2
chr152738967727389791+intron-Distal3.087166.17901K562SAFB2
chr152747460927474678+intron-Distal3.348554.02190K562EXOSC5
chr152739369927393747+intron-Distal4.157834.42851K562HNRNPL
chr152734660427346687+intron-Distal4.6500013.22362K562SAFB2
chr152734605027346145+intron-Distal3.437933.01707K562SLTM
chr152739019927390266+intron-Distal4.391076.05788K562SAFB2
chr152734487727344947+intron-Distal3.825386.78672K562SAFB2
chr152739458827394663+intron-Distal4.749727.10262K562SAFB2
chr152738373327383838+intron-Distal4.586995.51760K562MATR3
chr152736986627369927+intron-Distal3.067313.50904K562LIN28B
chr152739224327392297+intron-Distal3.105535.73849K562SAFB2
chr152737599027376028+intron-Distal3.719035.20902K562EXOSC5
chr152735027627350317+intron-Distal3.419125.10467K562SAFB2
chr152759581227595940+intron-Distal4.027573.38753K562FAM120A
chr152734772327347763+intron-Distal4.461475.60468K562SAFB2
chr152734551927345583+intron-Distal4.148909.86295K562SAFB2
chr152763472027634882+intron-Distal4.069604.04407K562HNRNPL
chr152745024127450293+intron-Distal4.111194.56666K562HNRNPM
chr152739964527399750+intron-Distal3.643878.13921K562KHSRP
chr152737632727376385+intron-Distal4.517969.10527K562EXOSC5
chr152739077127390835+intron-Distal5.554059.44534K562PTBP1
chr152737607727376116+intron-Distal3.999975.80937K562EXOSC5
chr152745024027450274+intron-Distal5.075776.41216K562EXOSC5
chr152743224027432306+intron-Distal4.178853.47525K562MATR3
chr152735610727356148+intron-Distal3.919573.23532K562MATR3
chr152735362527353726+intron-Distal5.527317.12711K562HNRNPM
chr152733344327333517+intron-Distal3.912843.99124K562FUS
chr152743484627434907+intron-Distal3.444253.43829K562EXOSC5
chr152745079427450822+intron-Distal4.9290713.52140K562EXOSC5
chr152742578827425847+intron-Distal3.316464.17049K562TARDBP
chr152744044927440532+intron-Distal5.451019.40930K562MATR3
chr152738596127386051+intron-Distal3.6327410.93931K562KHSRP
chr152742758927427709+intron-Distal5.2305210.05687K562TARDBP
chr152744047227440526+intron-Distal5.0235049.27077K562PTBP1
chr152738534527385425+intron-Distal4.474103.53404K562HNRNPM
chr152740539427405492+intron-Distal4.422065.04209K562MATR3
chr152735640027356476+intron-Distal4.214136.94951K562MATR3
chr152759733227597414+intron-Distal4.842384.01524K562FAM120A
chr152759618227596305+intron-Distal5.5346012.37862K562TARDBP
chr152743224027432297+intron-Distal3.6869710.01494K562EXOSC5
chr152744514727445206+intron-Distal5.4152815.56192K562PTBP1
chr152743155227431582+intron-Distal3.119076.26462K562EXOSC5
chr152744502027445079+intron-Distal5.019579.53330K562PTBP1
chr152743118827431233+intron-Distal5.223508.04096K562EXOSC5
chr152744950627449568+intron-Distal5.5821220.39543K562EXOSC5
chr152739576827395829+intron-Distal5.441086.85401K562QKI
chr152751543927515496+intron-Distal3.085443.20028K562TARDBP
chr152749202627492109+intron-Distal4.746145.97091K562TARDBP
chr152745428127454339+intron-Distal3.557884.22460K562RBM15
chr152759715727597240+intron-Distal5.047138.61835K562TARDBP
chr152735697327357034+intron-Distal3.412043.56409K562MATR3
chr152739379427393838+intron-Distal3.787033.60701K562KHDRBS1
chr152734611027346232+intron-Distal4.158904.79278K562SAFB
chr152735846127358533+intron-Distal3.471334.73075K562MATR3
chr152733670127336739+intron-Distal4.111313.30687K562EXOSC5
chr152742739427427498+intron-Distal3.499467.48221K562KHSRP
chr152745150827451516+intron-Distal4.651775.76606K562EXOSC5
chr152740950827409551+intron-Distal3.995353.80954K562HNRNPL
chr152737654727376584+intron-Distal3.784655.80877K562EXOSC5
chr152743085827430895+intron-Distal4.431025.12361K562EXOSC5
chr152734650527346571+intron-Distal3.9048910.80131K562SAFB2
chr152759638327596520+intron-Distal5.077099.04304K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GABRG3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GABRG3 is not available on ENCORE database.

  • 23 RBPs can affect the levels of GABRG3.  








The Knockdown/knockout RNA-Seq assay for GABRG3 is not available on ENCORE database.





23 RBPs can affect the gene expression of GABRG3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GABRG3ENSG00000182256.844.54100128.13270-1.524404.141103.47160K562AGGF1
GABRG3ENSG00000182256.847.00180133.31880-1.504103.981903.19630K562AKAP8L
GABRG3ENSG00000182256.8137.11810231.92110-0.758203.750303.08770K562AQR
GABRG3ENSG00000182256.863.97020139.86630-1.128603.076902.11150K562ATP5C1
GABRG3ENSG00000182256.8397.42370294.706700.431302.793302.13770K562DDX47
GABRG3ENSG00000182256.8137.9592085.158900.695902.574001.80560K562EIF3G
GABRG3ENSG00000182256.8476.26630355.712100.421003.394602.35790K562EIF4G2
GABRG3ENSG00000182256.8147.94090248.60150-0.748804.073003.03040K562FIP1L1
GABRG3ENSG00000182256.835.87570121.87390-1.764304.190902.59280K562HNRNPA2B1
GABRG3ENSG00000182256.872.06610122.78590-0.768802.403201.46600K562IGF2BP2
GABRG3ENSG00000182256.863.96020141.51650-1.145702.971102.11450K562KIF1C
GABRG3ENSG00000182256.840.00920111.11510-1.473702.840701.94430K562NAA15
GABRG3ENSG00000182256.850.04340106.55470-1.090302.244401.37130K562PABPN1
GABRG3ENSG00000182256.829.99980132.28090-2.140605.811505.05970K562PUS1
GABRG3ENSG00000182256.834.90590128.83370-1.884005.191104.40170K562RBM15
GABRG3ENSG00000182256.872.97520120.11770-0.719002.477401.68510K562RBM22
GABRG3ENSG00000182256.853.53740131.08470-1.291903.097601.44290K562RBM39
GABRG3ENSG00000182256.8136.5728054.438601.326904.842603.47100K562RPS3
GABRG3ENSG00000182256.840.5638087.06960-1.102002.226701.46170K562SF3B4
GABRG3ENSG00000182256.843.27490118.72080-1.456003.625702.04930K562SFPQ
GABRG3ENSG00000182256.868.30470116.04530-0.764602.497901.50770K562SRSF5
GABRG3ENSG00000182256.860.28770117.72130-0.965403.270302.06430K562TRA2A
GABRG3ENSG00000182256.848.49020134.05310-1.467002.713701.43790K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GABRG3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of GABRG3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GABRG3 is not avaliable on ENCORE database.