CA11

General Information

Gene Name       : CA11
Gene ID             : ENSG00000063180.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CA11)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CA11ENSG00000063180.81.221.301.26ENCSR000AEF
HepG2CA11ENSG00000063180.80.480.310.40ENCSR985KAT
K562CA11ENSG00000063180.816.268.5212.39ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CA11 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CA11 RNA is bound by 4 proteins.  







eCLIP assay for CA11 is not avaliable on ENCORE database.





4 proteins are bound to CA11 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr194914134749141424-3'-UTR,CDS,intron-Distal,intron-Proximal4.026533.67527K562SMNDC1
chr194914262649142699-CDS,intron-Distal3.652885.03335K562UCHL5
chr194914196549142029-intron-Distal4.478053.91475K562PTBP1
chr194914209949142145-intron-Distal,intron-Proximal4.284594.98250K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CA11 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CA11 is not available on ENCORE database.

  • 66 RBPs can affect the levels of CA11.  








The Knockdown/knockout RNA-Seq assay for CA11 is not available on ENCORE database.





66 RBPs can affect the gene expression of CA11 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CA11ENSG00000063180.490.1354044.391401.021702.499901.99170HepG2AKAP1
CA11ENSG00000063180.474.4100037.962700.970802.396901.42400HepG2AKAP8
CA11ENSG00000063180.4106.5366036.735201.536005.726904.61960HepG2ASCC1
CA11ENSG00000063180.4108.2224060.358100.842302.310701.42810HepG2CCAR1
CA11ENSG00000063180.465.8636034.289000.941602.358901.73670HepG2CKAP4
CA11ENSG00000063180.487.8831036.065301.284903.458702.59720HepG2CNOT7
CA11ENSG00000063180.4100.8393042.534401.245304.047703.30240HepG2DDX3X
CA11ENSG00000063180.4101.5687036.512501.475905.103204.28690HepG2DDX6
CA11ENSG00000063180.481.5026035.125601.214203.342502.69510HepG2EIF2S1
CA11ENSG00000063180.494.5324046.907501.010902.317101.60850HepG2FIP1L1
CA11ENSG00000063180.491.5986031.070501.559705.447903.91790HepG2FUS
CA11ENSG00000063180.4156.4986036.328502.1069013.1628011.77230HepG2G3BP1
CA11ENSG00000063180.4123.1052029.919702.0406012.3100011.10720HepG2HNRNPU
CA11ENSG00000063180.4121.0618041.307901.551206.100604.30060HepG2HSPD1
CA11ENSG00000063180.425.3681061.39210-1.275002.486501.79890HepG2IGF2BP1
CA11ENSG00000063180.477.0580035.161601.131802.882601.52820HepG2ILF3
CA11ENSG00000063180.487.0834041.288301.076602.739801.49830HepG2KRR1
CA11ENSG00000063180.410.6169039.15450-1.882803.316502.59830HepG2MAGOH
CA11ENSG00000063180.460.7718021.480801.500302.469301.47320HepG2METAP2
CA11ENSG00000063180.475.7692037.565201.012103.117302.30880HepG2NOL12
CA11ENSG00000063180.48.7683035.21270-2.005702.955202.18270HepG2NSUN2
CA11ENSG00000063180.470.5507035.923100.973602.331501.66440HepG2PABPC4
CA11ENSG00000063180.473.8779029.608301.319004.095203.08670HepG2PARN
CA11ENSG00000063180.493.6776037.655601.314705.016104.23590HepG2PCBP1
CA11ENSG00000063180.456.5733027.586801.036002.366201.64460HepG2PRPF4
CA11ENSG00000063180.476.5702038.317100.998702.615002.08080HepG2PTBP1
CA11ENSG00000063180.498.3725038.045801.370405.483204.55470HepG2PUM2
CA11ENSG00000063180.46.9907028.35670-2.020202.389301.73090HepG2RAVER1
CA11ENSG00000063180.487.4171045.181300.952102.886902.36060HepG2RBM22
CA11ENSG00000063180.422.8820067.12010-1.552503.238002.50790HepG2RPLP0
CA11ENSG00000063180.467.6774018.695801.855903.150301.58760HepG2SFPQ
CA11ENSG00000063180.414.6953041.63840-1.502602.450501.99840HepG2SRSF1
CA11ENSG00000063180.426.6644061.24070-1.199602.289201.65140HepG2SRSF7
CA11ENSG00000063180.413.6544040.11460-1.554802.639802.02500HepG2U2AF1
CA11ENSG00000063180.450.0699020.587701.282102.778901.73010HepG2UTP18
CA11ENSG00000063180.4554.65610390.361200.506702.850202.18740K562AKAP8L
CA11ENSG00000063180.4289.02860152.167700.925506.512404.72390K562CCAR1
CA11ENSG00000063180.4331.81770223.038300.573003.275202.41940K562CPSF6
CA11ENSG00000063180.4341.72230189.555600.850106.712905.00390K562DDX3X
CA11ENSG00000063180.4174.11650361.16110-1.0526011.2599010.04280K562DDX47
CA11ENSG00000063180.4261.67880170.369400.619003.186601.75270K562DHX30
CA11ENSG00000063180.474.82740154.77360-1.048503.378502.25820K562EIF3A
CA11ENSG00000063180.4305.01540198.021300.623103.523102.60020K562EIF4A3
CA11ENSG00000063180.4170.68920310.01270-0.861007.124205.63090K562EIF4G2
CA11ENSG00000063180.4308.54340160.626300.941706.649304.63440K562EXOSC5
CA11ENSG00000063180.4244.52600164.522500.571602.412401.37190K562FKBP4
CA11ENSG00000063180.487.75660205.93080-1.230607.159206.24830K562FXR1
CA11ENSG00000063180.448.87280123.37000-1.335904.130203.22530K562G3BP2
CA11ENSG00000063180.4368.35630212.942000.790505.672304.54060K562GPKOW
CA11ENSG00000063180.4281.69690183.068400.621702.884502.11490K562GRSF1
CA11ENSG00000063180.4478.89130238.378701.006304.529902.84950K562HNRNPA2B1
CA11ENSG00000063180.4529.09040414.226100.353002.426701.66000K562KIF1C
CA11ENSG00000063180.4303.01710207.857200.543702.902402.00320K562METAP2
CA11ENSG00000063180.4387.91460302.390100.359202.023301.32680K562MTPAP
CA11ENSG00000063180.4459.40100336.001400.451203.552502.71740K562NSUN2
CA11ENSG00000063180.4463.31670208.428001.152304.444803.11090K562PABPN1
CA11ENSG00000063180.4258.02450169.226000.608502.405101.64280K562PPIG
CA11ENSG00000063180.4463.29960247.713400.903203.464001.76960K562PPP1R8
CA11ENSG00000063180.4315.69950169.700700.895506.014204.60210K562PSIP1
CA11ENSG00000063180.4505.80120352.488200.520903.425702.35560K562PUM2
CA11ENSG00000063180.41013.81640387.039901.3891025.5375023.89220K562PUS1
CA11ENSG00000063180.4547.30110377.187800.537003.520902.86530K562RBM15
CA11ENSG00000063180.4464.61340256.411900.857503.027001.39930K562RBM39
CA11ENSG00000063180.4146.47940275.84790-0.913204.840503.46940K562RPS3
CA11ENSG00000063180.4346.56300190.563300.862702.766101.56260K562SF1
CA11ENSG00000063180.4422.55840331.519500.350002.020101.31590K562SF3A3
CA11ENSG00000063180.4290.69090202.532500.521202.160101.31220K562SF3B1
CA11ENSG00000063180.4250.12280339.64640-0.441402.701601.77500K562SRPK2
CA11ENSG00000063180.4279.46500163.213600.775804.195403.02130K562TIAL1
CA11ENSG00000063180.4290.99990173.486300.746103.323402.26720K562TRIM56
CA11ENSG00000063180.4246.08150316.99150-0.365302.051301.31560K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CA11 is not available on ENCORE database.





4 RBPs can affect the splicing of CA11 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SECA11ENSG00000063180.4chr19-4914149649141692491412784914140149142144491423950.251000.002660.08169includedK562FXR1
SECA11ENSG00000063180.4chr19-491414964914155049141278491414014914214449142310-0.615000.001130.06185excludedHepG2NCBP2
A3SSCA11ENSG00000063180.4chr19-4914304449143252491430444914314049143351491435370.182000.000110.00095longerK562AQR
A3SSCA11ENSG00000063180.4chr19-4914304449143252491430444914314049143351491435370.082000.000510.02791longerK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for CA11 is not avaliable on ENCORE database.