C10orf76

General Information

Gene Name       : C10orf76
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C10orf76)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C10orf76 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C10orf76 RNA is bound by 13 proteins.  







eCLIP assay for C10orf76 is not avaliable on ENCORE database.





13 proteins are bound to C10orf76 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr10103606045103606117-3'-UTR,intron-Distal4.188107.71013HepG2PCBP2
chr10103607136103607256-3'-UTR,intron-Distal3.111913.03291HepG2AKAP1
chr10103606027103606170-3'-UTR,intron-Distal4.807806.38589HepG2AKAP1
chr10103606998103607104-3'-UTR,intron-Distal3.000514.56550HepG2UPF1
chr10103607032103607136-3'-UTR,intron-Distal3.232273.68605HepG2AKAP1
chr10103606893103606943-3'-UTR,intron-Distal3.555055.08828HepG2XRCC6
chr10103799836103799882-3'-UTR,5'-UTR,CDS,intron-Distal3.011533.65693HepG2NCBP2
chr10103815831103815896-5'-UTR,intron-Distal3.893933.26022HepG2PRPF4
chr10103815809103815947-5'-UTR,intron-Distal4.5216013.17247HepG2NCBP2
chr10103773723103773767-CDS,intron-Distal,intron-Proximal5.020927.95701HepG2PPIG
chr10103792746103792799-CDS,intron-Distal,intron-Proximal4.241447.13970HepG2PRPF8
chr10103751725103751731-CDS,intron-Distal,intron-Proximal3.969143.02457HepG2BCLAF1
chr10103783242103783273-CDS,intron-Distal3.624074.17155HepG2BCLAF1
chr10103792782103792878-CDS,intron-Distal,intron-Proximal3.9737216.43154HepG2BCLAF1
chr10103750316103750350-CDS,intron-Distal3.267183.59112HepG2PPIG
chr10103792799103792847-CDS,intron-Distal3.871064.80912HepG2PPIG
chr10103769740103769796-CDS,intron-Distal,intron-Proximal4.0698212.50926HepG2U2AF2
chr10103751725103751764-CDS,intron-Distal,intron-Proximal4.695875.56813HepG2PPIG
chr10103771480103771489-CDS,intron-Distal3.526883.87469HepG2BCLAF1
chr10103793065103793094-CDS,intron-Distal4.474705.18660HepG2PPIG
chr10103789469103789503-CDS,intron-Distal,intron-Proximal3.066616.39923HepG2BCLAF1
chr10103609483103609535-CDS,intron-Distal,intron-Proximal3.880855.93840HepG2PRPF8
chr10103784914103784929-CDS,intron-Distal3.464123.94979HepG2BCLAF1
chr10103789327103789402-CDS,intron-Distal,intron-Proximal5.3000414.11848HepG2PRPF8
chr10103792780103792866-CDS,intron-Distal,intron-Proximal4.209019.83058HepG2GRWD1
chr10103799725103799781-CDS,intron-Distal,intron-Proximal3.808435.28701K562PRPF8
chr10103716358103716372-CDS,intron-Distal4.580344.70478HepG2BCLAF1
chr10103793041103793065-CDS,intron-Distal3.551124.52024HepG2PPIG
chr10103769740103769780-CDS,intron-Distal3.033783.85381HepG2BCLAF1
chr10103735015103735054-CDS,intron-Distal3.698833.14999HepG2GRWD1
chr10103619738103619844-intron-Distal4.517194.17759HepG2QKI
chr10103733278103733476-intron-Distal3.248706.13768HepG2PTBP1
chr10103806370103806410-intron-Distal3.428283.30744K562PTBP1
chr10103791752103791802-intron-Distal4.541745.14974HepG2UPF1
chr10103694479103694581-intron-Distal4.330003.55640HepG2QKI
chr10103805954103806060-intron-Distal4.7049010.68324K562PTBP1
chr10103805968103806081-intron-Distal3.303897.48701HepG2PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C10orf76 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C10orf76 is not available on ENCORE database.

  • 29 RBPs can affect the levels of C10orf76.  








The Knockdown/knockout RNA-Seq assay for C10orf76 is not available on ENCORE database.





29 RBPs can affect the gene expression of C10orf76 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C10orf76ENSG00000120029.8639.45510477.307100.421802.486801.74910HepG2CIRBP
C10orf76ENSG00000120029.8388.18420493.62280-0.346702.568501.92330HepG2CKAP4
C10orf76ENSG00000120029.8515.09430672.41100-0.384502.284401.54000HepG2EIF4G2
C10orf76ENSG00000120029.8658.09680904.20270-0.458305.254404.47350HepG2ETF1
C10orf76ENSG00000120029.8466.03550653.87890-0.488604.641503.48110HepG2HNRNPA2B1
C10orf76ENSG00000120029.8329.09030504.57270-0.616604.377903.52090HepG2HNRNPC
C10orf76ENSG00000120029.8667.81300504.940700.403202.361101.73170HepG2IGF2BP2
C10orf76ENSG00000120029.8396.90590511.99820-0.367303.006202.24450HepG2ILF2
C10orf76ENSG00000120029.8563.03500705.48650-0.325402.263101.57370HepG2NOL12
C10orf76ENSG00000120029.8252.40050367.23030-0.541002.055701.30650HepG2PABPC1
C10orf76ENSG00000120029.8363.76600491.00320-0.432702.321001.65500HepG2PABPC4
C10orf76ENSG00000120029.8350.28750447.06450-0.351902.194401.52980HepG2PPIL4
C10orf76ENSG00000120029.8235.91890373.92350-0.664503.387602.50180HepG2PRPF8
C10orf76ENSG00000120029.8336.23280673.46320-1.0021012.5479011.40150HepG2PUF60
C10orf76ENSG00000120029.8508.19960714.92810-0.492405.935005.13340HepG2PUM1
C10orf76ENSG00000120029.8581.07560755.75390-0.379202.880702.35490HepG2RBM22
C10orf76ENSG00000120029.8397.44860506.37620-0.349402.194901.65930HepG2SF3B4
C10orf76ENSG00000120029.8504.14320645.78140-0.357202.999402.27210HepG2SLBP
C10orf76ENSG00000120029.8288.37200516.31480-0.840306.005304.55200HepG2SMNDC1
C10orf76ENSG00000120029.81041.87190853.609900.287403.004002.48880HepG2SRFBP1
C10orf76ENSG00000120029.8683.18560528.558600.370103.044402.55340HepG2SRSF1
C10orf76ENSG00000120029.8339.17030430.02040-0.342402.163301.66300HepG2SRSF9
C10orf76ENSG00000120029.8559.14550741.15950-0.406603.900003.31430HepG2SSB
C10orf76ENSG00000120029.8378.76380475.12070-0.327001.846401.37100HepG2TAF15
C10orf76ENSG00000120029.8334.75390487.06700-0.541004.246503.65490HepG2TIAL1
C10orf76ENSG00000120029.8370.42760491.39810-0.407703.127702.53640HepG2TRIM56
C10orf76ENSG00000120029.8505.58510657.97300-0.380102.470001.64710HepG2TUFM
C10orf76ENSG00000120029.8316.29400510.43090-0.690405.014404.18210HepG2U2AF1
C10orf76ENSG00000120029.8683.04230491.007300.476104.820004.06570HepG2UTP3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C10orf76 is not available on ENCORE database.





3 RBPs can affect the splicing of C10orf76 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEC10orf76ENSG00000120029.8chr10-103773724103773781103766296103766390103783233103783320-0.637000.000000.00001excludedHepG2U2AF2
SEC10orf76ENSG00000120029.8chr10-1037744111037745611037737241037737811037832331037833200.348000.000820.04867includedHepG2NCBP2
SEC10orf76ENSG00000120029.8chr10-103699619103699695103649168103649247103716353103716480-0.184000.000440.01583excludedHepG2SF3A3
MXEC10orf76ENSG00000120029.8chr10-103717406103717489103734968103735057103716353103716480103750307103750368-0.532000.000000.000072includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for C10orf76 is not avaliable on ENCORE database.