ANKRD49

General Information

Gene Name       : ANKRD49
Gene ID             : ENSG00000168876.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ANKRD49)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ANKRD49ENSG00000168876.837.7931.7234.75ENCSR000AEF
HepG2ANKRD49ENSG00000168876.86.3514.0610.21ENCSR985KAT
K562ANKRD49ENSG00000168876.821.1824.4722.82ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ANKRD49 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on ANKRD49 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ANKRD49 is not avaliable on ENCORE database.






NO known proteins are bound to ANKRD49 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ANKRD49 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ANKRD49 is not available on ENCORE database.

  • 38 RBPs can affect the levels of ANKRD49.  








The Knockdown/knockout RNA-Seq assay for ANKRD49 is not available on ENCORE database.





38 RBPs can affect the gene expression of ANKRD49 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ANKRD49ENSG00000168876.4328.22600213.139200.622803.367502.51950HepG2CIRBP
ANKRD49ENSG00000168876.4123.84300240.73160-0.958904.376103.41020HepG2CNOT7
ANKRD49ENSG00000168876.4284.56520196.323200.535403.001302.29920HepG2DKC1
ANKRD49ENSG00000168876.4135.32930204.56520-0.596102.842002.13210HepG2DNAJC21
ANKRD49ENSG00000168876.4343.84140237.101200.536102.613101.99090HepG2EIF4A3
ANKRD49ENSG00000168876.4205.86800280.05070-0.444002.043001.33560HepG2EIF4G2
ANKRD49ENSG00000168876.4331.00840229.347700.529202.388101.78950HepG2GPKOW
ANKRD49ENSG00000168876.4300.73410206.525000.542102.510601.89200HepG2HNRNPA1
ANKRD49ENSG00000168876.4209.54510133.473200.650602.553201.77630HepG2PRPF8
ANKRD49ENSG00000168876.4145.53850220.73090-0.600902.040401.55840HepG2PTBP1
ANKRD49ENSG00000168876.4144.69790209.00770-0.530501.945701.40970HepG2PUS1
ANKRD49ENSG00000168876.4424.97470266.079100.675405.836005.15310HepG2RBM22
ANKRD49ENSG00000168876.4340.42450246.621200.464902.470001.81890HepG2RPLP0
ANKRD49ENSG00000168876.4443.97720252.878800.811905.470604.50300HepG2SF3A3
ANKRD49ENSG00000168876.4363.99640260.944700.480103.377602.82350HepG2SSB
ANKRD49ENSG00000168876.4144.07390223.72170-0.634903.358802.75100HepG2TRIM56
ANKRD49ENSG00000168876.4411.15810248.421100.726804.828604.01160HepG2U2AF1
ANKRD49ENSG00000168876.4361.65790246.648500.552104.367203.72130HepG2ZNF622
ANKRD49ENSG00000168876.4446.96390326.466600.453102.652001.49970K562AARS
ANKRD49ENSG00000168876.4305.47090475.90860-0.639604.434303.74590K562AGGF1
ANKRD49ENSG00000168876.4321.48440495.18600-0.623203.972803.18830K562AKAP8L
ANKRD49ENSG00000168876.41105.55900633.599700.803009.215208.24540K562AQR
ANKRD49ENSG00000168876.4527.99070396.460700.413202.527701.30610K562CIRBP
ANKRD49ENSG00000168876.4877.84430680.903100.366402.931602.26200K562DDX47
ANKRD49ENSG00000168876.4372.45870245.615700.600603.832902.87090K562EIF4A3
ANKRD49ENSG00000168876.4403.67920255.428500.660205.342104.53940K562FXR1
ANKRD49ENSG00000168876.4573.11880332.880000.783705.661504.56830K562G3BP2
ANKRD49ENSG00000168876.4471.22180357.294500.399202.282901.73310K562HNRNPC
ANKRD49ENSG00000168876.4554.94100369.472800.586802.483001.31910K562HNRNPK
ANKRD49ENSG00000168876.4639.10890455.393100.488802.978602.00960K562HNRNPM
ANKRD49ENSG00000168876.4496.58010388.763400.353002.164801.41670K562MAGOH
ANKRD49ENSG00000168876.41327.56960928.771900.515305.215803.11930K562NOL12
ANKRD49ENSG00000168876.4268.41430431.60600-0.685302.494701.56800K562PABPN1
ANKRD49ENSG00000168876.4461.93960345.916300.417202.395601.48840K562PCBP2
ANKRD49ENSG00000168876.4497.79110269.941600.882807.631006.37920K562PRPF8
ANKRD49ENSG00000168876.4291.38100377.70270-0.374302.040701.45390K562PTBP1
ANKRD49ENSG00000168876.41445.62870926.485400.641807.228305.90610K562PUF60
ANKRD49ENSG00000168876.4243.29030491.22080-1.013707.888007.01850K562PUS1
ANKRD49ENSG00000168876.4342.27390478.51110-0.483403.099302.47730K562RBM15
ANKRD49ENSG00000168876.4396.61520275.021800.528102.742001.93030K562RPS19
ANKRD49ENSG00000168876.4394.71810296.423500.413102.378401.61700K562SYNCRIP
ANKRD49ENSG00000168876.4438.96740540.63980-0.300601.948601.33830K562UPF1
ANKRD49ENSG00000168876.4586.63600481.051600.286202.076001.33520K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ANKRD49 is not available on ENCORE database.





2 RBPs can affect the splicing of ANKRD49 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEANKRD49ENSG00000168876.4chr11+9423106794231130942297699423011794231236942313800.269000.003620.05780includedK562SF3B4
SEANKRD49ENSG00000168876.4chr11+9423106794231130942297699423011794231236942313800.281000.004010.06887includedK562U2AF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ANKRD49 is not avaliable on ENCORE database.