TONSL

General Information

Gene Name : TONSL
Gene ID : ENSG00000160949.16
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TONSL)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TONSL	ENSG00000160949.16	0.49	1.61	1.05	ENCSR000AEF
HepG2	TONSL	ENSG00000160949.16	19.49	3.05	11.27	ENCSR985KAT
K562	TONSL	ENSG00000160949.16	15.99	6.35	11.17	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TONSL is not avaliable on ENCORE database.

Proteins bound to RNA

TONSL RNA is bound by 23 proteins.

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eCLIP assay for TONSL is not avaliable on ENCORE database.

23 proteins are bound to TONSL RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	145668261	145668317	-	intron-Distal,intron-Proximal	5.66592	26.63221	K562	RBM15
chr8	145668317	145668369	-	intron-Distal,intron-Proximal	5.45257	22.03583	K562	RBM15
chr8	145668169	145668235	-	CDS,intron-Distal,intron-Proximal	5.98468	21.75661	HepG2	SF3A3
chr8	145668499	145668580	-	CDS,intron-Distal,intron-Proximal	5.56129	21.53778	K562	RBM15
chr8	145667320	145667422	-	CDS,intron-Distal,intron-Proximal	6.82003	21.45455	K562	AQR
chr8	145660193	145660264	-	CDS,intron-Distal,intron-Proximal	5.10621	21.42552	HepG2	PPIG
chr8	145667422	145667506	-	CDS,intron-Distal	4.53934	17.58977	HepG2	PPIG
chr8	145665400	145665492	-	CDS,intron-Distal,intron-Proximal	5.22167	17.24220	K562	DDX24
chr8	145668165	145668241	-	CDS,intron-Distal,intron-Proximal	4.97364	17.03352	K562	SF3B4
chr8	145658925	145658957	-	intron-Distal,intron-Proximal	4.97487	17.02742	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 145 entries

eCLIP assay for TONSL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TONSL is not available on ENCORE database.
113 RBPs can affect the levels of TONSL.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TONSL is not available on ENCORE database.

113 RBPs can affect the gene expression of TONSL :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TONSL	ENSG00000160949.12	332.58460	841.49050	-1.33920	37.37230	35.96110	HepG2	ZNF622
TONSL	ENSG00000160949.12	928.17920	260.49900	1.83300	33.00100	30.94050	HepG2	MAGOH
TONSL	ENSG00000160949.12	1122.78630	474.34340	1.24300	24.44770	22.55780	K562	PTBP1
TONSL	ENSG00000160949.12	905.29780	443.18730	1.03040	24.02010	22.48100	HepG2	SUCLG1
TONSL	ENSG00000160949.12	909.84850	394.67780	1.20490	21.31200	19.86770	HepG2	PUF60
TONSL	ENSG00000160949.12	244.34470	1013.39610	-2.05220	20.06470	19.03870	HepG2	SRFBP1
TONSL	ENSG00000160949.12	1131.63970	453.94040	1.31770	19.79630	17.46270	K562	TIA1
TONSL	ENSG00000160949.12	771.31040	389.70840	0.98480	18.64640	17.22350	HepG2	SRSF5
TONSL	ENSG00000160949.12	747.54910	306.25850	1.28730	17.46400	16.32910	HepG2	NELFE
TONSL	ENSG00000160949.12	137.70950	482.77120	-1.80970	16.55610	15.16150	HepG2	RPLP0
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 135 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TONSL is not available on ENCORE database.

20 RBPs can affect the splicing of TONSL :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TONSL	ENSG00000160949.12	chr8	-	145666348	145666494	145666100	145666253	145667419	145667534	-0.38000	0.00000	0.00004	excluded	HepG2	U2AF1
A3SS	TONSL	ENSG00000160949.12	chr8	-	145667623	145667815	145667623	145667795	145668059	145668189	0.15300	0.00000	0.00000	longer	K562	AQR
A3SS	TONSL	ENSG00000160949.12	chr8	-	145655786	145655965	145655786	145655920	145656460	145656692	0.09300	0.00000	0.00000	longer	K562	AQR
A3SS	TONSL	ENSG00000160949.12	chr8	-	145660399	145660623	145660399	145660553	145660856	145660933	0.05300	0.00000	0.00003	longer	K562	AQR
A3SS	TONSL	ENSG00000160949.12	chr8	-	145656460	145656692	145656460	145656534	145657667	145659142	0.12200	0.00000	0.00001	longer	K562	AQR
RI	TONSL	ENSG00000160949.12	chr8	-	145657667	145659142	145657667	145657843	145658970	145659142	0.26300	0.00000	0.00000	included	HepG2	SF3A3
RI	TONSL	ENSG00000160949.12	chr8	-	145657667	145659142	145657667	145657843	145658970	145659142	0.21300	0.00000	0.00004	included	K562	AGGF1
RI	TONSL	ENSG00000160949.12	chr8	-	145657667	145659142	145657667	145657843	145658970	145659142	0.21400	0.00000	0.00004	included	K562	AKAP8L
RI	TONSL	ENSG00000160949.12	chr8	-	145657667	145659142	145657667	145657843	145658970	145659142	0.24200	0.00001	0.00013	included	HepG2	U2AF1
RI	TONSL	ENSG00000160949.12	chr8	-	145657667	145659142	145657667	145657843	145658970	145659142	-0.21700	0.00004	0.01307	excluded	K562	IGF2BP2

Showing 1 to 10 of 31 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TONSL

General Information

Functions

Localization

Domains (AlphaFold: TONSL)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TONSL is not avaliable on ENCORE database.

23 proteins are bound to TONSL RNA:

eCLIP assay for TONSL is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TONSL is not available on ENCORE database.

113 RBPs can affect the gene expression of TONSL :

The Knockdown/knockout RNA-Seq assay for TONSL is not available on ENCORE database.

20 RBPs can affect the splicing of TONSL :

The Knockdown/knockout RNA-Seq assay for TONSL is not avaliable on ENCORE database.