SUMF2

General Information

Gene Name : SUMF2
Gene ID : ENSG00000129103.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SUMF2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SUMF2	ENSG00000129103.17	55.17	71.81	63.49	ENCSR000AEF
HepG2	SUMF2	ENSG00000129103.17	33.62	31.47	32.55	ENCSR985KAT
K562	SUMF2	ENSG00000129103.17	78.34	75.88	77.11	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SUMF2 is not avaliable on ENCORE database.

Proteins bound to RNA

SUMF2 RNA is bound by 17 proteins.

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eCLIP assay for SUMF2 is not avaliable on ENCORE database.

17 proteins are bound to SUMF2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	56140718	56140785	+	3'-UTR,CDS,intron-Distal	6.67786	23.19458	K562	LIN28B
chr7	56144433	56144570	+	3'-UTR,CDS,intron-Distal,intron-Proximal	6.10128	22.09990	HepG2	U2AF2
chr7	56147511	56147553	+	3'-UTR,CDS	4.51018	18.69739	K562	UPF1
chr7	56147634	56147680	+	3'-UTR	3.22439	17.44013	K562	YBX3
chr7	56147708	56147778	+	3'-UTR	3.12991	15.25461	K562	UPF1
chr7	56144428	56144562	+	3'-UTR,CDS,intron-Distal,intron-Proximal	5.94556	12.64691	K562	AQR
chr7	56147553	56147592	+	3'-UTR,CDS	3.64169	12.47309	K562	UPF1
chr7	56142276	56142357	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.37115	12.06907	HepG2	SND1
chr7	56147405	56147470	+	3'-UTR,CDS	4.25770	11.48940	HepG2	PCBP2
chr7	56147970	56148085	+	3'-UTR	3.52328	11.44456	K562	HNRNPC
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 41 entries

eCLIP assay for SUMF2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SUMF2 is not available on ENCORE database.
124 RBPs can affect the levels of SUMF2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SUMF2 is not available on ENCORE database.

124 RBPs can affect the gene expression of SUMF2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SUMF2	ENSG00000129103.13	444.81610	1652.80910	-1.89360	60.23460	57.60780	K562	HNRNPC
SUMF2	ENSG00000129103.13	3348.20160	1868.14300	0.84170	43.62260	41.84550	HepG2	PUM1
SUMF2	ENSG00000129103.13	1052.42650	2060.15740	-0.96900	34.33000	32.98780	HepG2	SSB
SUMF2	ENSG00000129103.13	710.39680	1759.75820	-1.30870	31.89570	30.16030	HepG2	PUF60
SUMF2	ENSG00000129103.13	3685.80730	1729.14950	1.09180	31.22750	29.55440	HepG2	CELF1
SUMF2	ENSG00000129103.13	865.20800	2066.99640	-1.25640	29.81550	26.71530	K562	PCBP2
SUMF2	ENSG00000129103.13	1304.80040	2942.80730	-1.17340	26.73680	25.11010	K562	AQR
SUMF2	ENSG00000129103.13	908.77190	1731.43020	-0.93000	26.46160	24.95280	HepG2	SF3B4
SUMF2	ENSG00000129103.13	606.89930	1487.34720	-1.29320	26.03350	22.75730	K562	EFTUD2
SUMF2	ENSG00000129103.13	1144.30330	2053.55100	-0.84370	22.57010	20.95840	K562	FXR1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 156 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SUMF2 is not available on ENCORE database.

27 RBPs can affect the splicing of SUMF2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SUMF2	ENSG00000129103.13	chr7	+	56141866	56141911			56140689	56140804	56142278	56142332	-0.08500	0.00000	0.00140	excluded	K562	ZC3H8
A3SS	SUMF2	ENSG00000129103.13	chr7	+	56141806	56141911			56141866	56141911	56140689	56140804	0.36000	0.00000	0.00000	longer	HepG2	U2AF2
MXE	SUMF2	ENSG00000129103.13	chr7	+	56136174	56136331	56140689	56140804	56131916	56132071	56141866	56141911	0.19700	0.00000	0.00031	1included	K562	XRN2
MXE	SUMF2	ENSG00000129103.13	chr7	+	56141866	56141911	56142278	56142429	56140689	56140804	56144526	56144582	-0.29500	0.00000	0.00003	2included	HepG2	U2AF2
MXE	SUMF2	ENSG00000129103.13	chr7	+	56141866	56141911	56142278	56142445	56140689	56140804	56145794	56145879	-0.06500	0.00000	0.00158	2included	K562	ZC3H8
MXE	SUMF2	ENSG00000129103.13	chr7	+	56141866	56141911	56142278	56142445	56140689	56140804	56144526	56144582	-0.06800	0.00000	0.00036	2included	K562	ZC3H8
SE	SUMF2	ENSG00000129103.13	chr7	+	56142278	56142429			56141806	56141911	56144526	56144582	-0.08900	0.00001	0.00130	excluded	HepG2	RBM22
SE	SUMF2	ENSG00000129103.13	chr7	+	56146614	56146732			56146056	56146201	56147220	56147429	-0.09200	0.00002	0.00039	excluded	HepG2	U2AF2
MXE	SUMF2	ENSG00000129103.13	chr7	+	56140689	56140804	56144526	56144582	56136174	56136331	56145794	56145879	-0.14300	0.00003	0.00364	2included	K562	TIA1
MXE	SUMF2	ENSG00000129103.13	chr7	+	56140689	56140804	56144526	56144582	56136174	56136331	56145794	56145879	-0.15100	0.00004	0.00261	2included	K562	PTBP1

Showing 1 to 10 of 53 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SUMF2

General Information

Functions

Localization

Domains (AlphaFold: SUMF2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SUMF2 is not avaliable on ENCORE database.

17 proteins are bound to SUMF2 RNA:

eCLIP assay for SUMF2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SUMF2 is not available on ENCORE database.

124 RBPs can affect the gene expression of SUMF2 :

The Knockdown/knockout RNA-Seq assay for SUMF2 is not available on ENCORE database.

27 RBPs can affect the splicing of SUMF2 :

The Knockdown/knockout RNA-Seq assay for SUMF2 is not avaliable on ENCORE database.